SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30016_c0_seq9
Scaffold_id
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:1.59 TPM:1.60
ORF EntryO_SariMG13850_complete:A_SariMG_comp30016_c0_seq9
Sequence
(Nucleotide)
TCGGTATCGCGTTATGCGTCGTTATCACGTTTGGCGGGATCAGTCTGAGCGCGGCATTCA
TAAGAGACGCACGTCGCACGGCGAGATATAGTAACGTTTTCCGTAGATTTTCCGACCGTT
TCTCGCGCGCTCCTCTATATCTACTTCAGGCTACCACCCGCCTCCTATCGCGTCGCATCT
TGAAATGTCACCATAATAATATCAAATTAACGCTGTGTGGAGACCAGGGGCGCCATCGTT
ACCGCCAGGACCTGCACCTGCACCGAGTGTCACACGCAGTCCGGGCGCTCCGCCCCCGCC
GCCGCCGCCACCCGTGTGGGTGCCCGGCAGCGCGGGCGCTTCGCCCCAAGCTACGCGCAA
AACCTTCCGCCCCGTACACTTCGAAGAAACGCCACCCAGCCGCCGTAAATTTGGAAGTTC
AGATCAGAACGGTTGCACAAGCGGATCGGAGAGTGAAGGACGGCTGAAGACGTCACATAG
CGCACCAGTCACAGGACTAAACACTTTAGGAAGTCCGTCGTCGAGCAGCCGCCTTCCGCG
TGCTCCGAACCCTACGGTCACTTTACTTCAAAAAGCACGAGAAGGCCAAATTTCACGTGG
TGCAAGTTATCTTCAATCAGATAGAGATAGCGCACGCTTACCGCGAGACCGTCCGTCACC
ACCGAAGAGTGACCCAGTGCATGCACTACGAAAAGAATACGCAAGCGAAACTGAAGTGGA
AAGAAGCGACTACGAACGTGGAGGTCCTCGTAAAATGGCCGATGCCCAGAAGAAGATAGA
AGGAATCGGACCGACAACCAAAGACGGCATACCTGTCGCACTTAGATCTGAAGTCAAAGA
CCCTTCGAGGTGGTACAAAAAAATGTACGACACTATACACAAAAACAAGTACGATGGTCA
ACCGGAACGCATATCAAGCAACAAATCTCAGTACGCATATTTCGATCCTCGTTCGGGATA
TCTAAGCGAACCCGAGGGAGGGCTTGGACGATTAGGCTCAAGCACTTGGAGTGACGCATA
CGACAGCGATGTCGGTACGGGCCCGCGCCGACGAACTGCTTCAGTACAAGAAGAAAGACG
AAGCGACATCACCACTACATACTTACCTAGTAATAAATATAGTACTCTAGCATCAGCGAG
AGCAAGCCAAGAAATGTATAGAAACCAACCAGGGAGAATAGAAAATTACGTACCCGGACG
ATCTTCTGTGATAGACAAAGAAGCTAAGCAGTGGTGGGACGAGGTCATGGACATTTTTGA
TGGGCAAAACATCACAAGTACAACATCTTTGCCTCAAGCATCGCCTAAAGAAAAAAAGGA
CATCACATCTGCCATTTTATCGAAATCAAACATGGCAAAAGCTCTTAAAGAATCAGGGTA
TGAATCGGACTCTACTCTCATTTTCCGACGAAGAGAAGACACAGAAGCGCCATTGTCGCC
TGCAGAGAGACGAGCTGCGTATAGAGATTTACAAGCAGGTGGAGAACCGCCTTTAAGAGG
GTTCCGTTCTCCAGCACCGCCTCGACAAGAATCCCCTCGTCGATACGTGGAGAGTGACGT
AAACATCCACTATCGTGTTCCGGTGAGACACGACCCCTTGCCTCTGGTACCCGAGCGCGA
GCTTGCGCGCCAGCAGGCAGAACACATGAAAAGGCTCTACAGAGAGCAAAGGAGGACTAA
ATATTTACAGGAATTGCAAGATATGCAAAACCGTCGTCATCAAGATAACTTCACGCCGTC
ACAGAAGACAGTCGTTCCCTTGAACCGATACGACGAAGCTGACAAAGTGACTGCAAAGTC
TCTATATACCTTCAACGGGCAAACGCCAAGAGAGCTCAGTTTCAGGAAAGGAGAAATCAT
TCACGTGAGACGCCAGATCGACGCTAATTGGTATGAAGGAGAAGTCCATGGGAAGATTGG
ATTGTTCCCCTACAATTATGTTGAGATACAAAAAAGTGACATAGTACAATCTCCCAAGAA
ACCTGCAACCATAGAAGGTCGTGCACGTGCCAAATTCGACTTCATAGCGCAGACGAATCT
CGAATTGCCATTGAAGAAAGGCGAAATAGTCGTACTTTCGCGACGCATAGATCAAAATTG
GTGGGAGGGCAGGAACGGCGTCAAAACTGGTATCTTCCCGGATAGTTACGTCACAGTGTT
ACAAGAACCCACTCAGAGTAAACCTGAACCGACACCGATACTAAGTACGGACAAACCGGT
CGCCTCGCCTGCTGCTCACGGCTTGCTGAACGGTACCGACAAACGAAGTATGGGTTCACA
CAGCTACACGCCGCAACCGAACAGTCCCGCACTCGCCAACGCACCACCTGCCACACAACC
ATTACCAGGTTACGTGGCTAAACCCGCCCAAGCCACGCTCACTCCATCGGACCGCGGCTA
CGGCCCACCGACGGGACCGGGAGTCGACCTTAACAACGCAGAGCCTTTATACGTCGATAC
CAATGCCGAAGCTGTGCCATATCGTGCGATGTACAAATACCGACCACAGAATCCCGACGA
GCTAGAACTGCAGGAAGGTGACACTGTCTATGTTCTAGAGAAATGCGACGACGGTTGGTA
CGTCGGTTCTAGTCAACGCACTGGACGCTTCGGCACCTTCCCAGGTAACTACGTGGAACG
CATCTGATAGCGCGAGGCGTCATTACTGCGACGTTTGAGACGCGCCACATTGTGGACGCG
ACGTCGACGCTG
(2712 bp)

- SilkBase 1999-2023 -