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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30016_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:3.54 TPM:3.55
ORF EntryO_SariMG13839_complete:A_SariMG_comp30016_c0_seq3
Sequence
(Nucleotide)
TCGGTATCGCGTTATGCGTCGTTATCACGTTTGGCGGGATCAGTCTGAGCGCGGCATTCA
TAAGAGACGCACGTCGCACGGCGAGATATAGTAACGTTTTCCGTAGATTTTCCGACCGTT
TCTCGCGCGCTCCTCTATATCTACTTCAGGCTACCACCCGCCTCCTATCGCGTCGCATCT
TGAAATGTCACCATAATAATATCAAATTAACGCTGTGTGGAGACCAGGGGCGCCATCGTT
ACCGCCAGGACCTGCACCTGCACCGAGTGTCACACGCAGTCCGGGCGCTCCGCCCCCGCC
GCCGCCGCCACCCGTGTGGGTGCCCGGCAGCGCGGGCGCTTCGCCCCAAGCTACGCGCAA
AACCTTCCGCCCCGTACACTTCGAAGAAACGCCACCCAGCCGCCGTAAATTTGGAAGTTC
AGATCAGAACGGTTGCACAAGCGGATCGGAGAGTGAAGGACGGCTGAAGACGTCACATAG
CGCACCAGTCACAGGACTAAACACTTTAGGAAGTCCGTCGTCGAGCAGCCGCCTTCCGCG
TGCTCCGAACCCTACGGTCACTTTACTTCAAAAAGCACGAGAAGGCCAAATTTCACGTGG
TGCAAGTTATCTTCAATCAGATAGAGATAGCGCACGCTTACCGCGAGACCGTCCGTCACC
ACCGAAGAGTGACCCAGTGCATGCACTACGAAAAGAATACGCAAGCGAAACTGAAGTGGA
AAGAAGCGACTACGAACGTGGAGGTCCTCGTAAAATGGCCGATGCCCAGAAGAAGATAGA
AGGAATCGGACCGACAACCAAAGACGGCATACCTGTCGCACTTAGATCTGAAGTCAAAGA
CCCTTCGAGGTGGTACAAAAAAATGTACGACACTATACACAAAAACAAGTACGATGGTCA
ACCGGAACGCATATCAAGCAACAAATCTCAGTACGCATATTTCGATCCTCGTTCGGGATA
TCTAAGCGAACCCGAGGGAGGGCTTGGACGATTAGGCTCAAGCACTTGGAGTGACGCATA
CGACAGCGATGTCGGTACGGGCCCGCGCCGACGAACTGCTTCAGTACAAGAAGAAAGACG
AAGCGACATCACCACTACATACTTACCTAGTAATAAATATAGTACTCTAGCATCAGCGAG
AGCAAGCCAAGAAATGTATAGAAACCAACCAGGGAGAATAGAAAATTACGTACCCGGACG
ATCTTCTGTGATAGACAAAGAAGCTAAGCAGCAAAACATCACAAGTACAACATCTTTGCC
TCAAGCATCGCCTAAAGAAAAAAAGGACATCACATCTGCCATTTTATCGAAATCAAACAT
GGCAAAAGCTCTTAAAGAATCAGGGTATGAATCGGACTCTACTCTCATTTTCCGACGAAG
AGAAGACACAGAAGCGCCATTGTCGCCTGCAGAGAGACGAGCTGCGTATAGAGATTTACA
AGCAGGTGGAGAACCGCCTTTAAGAGGGTTCCGTTCTCCAGCACCGCCTCGACAAGAATC
CCCTCGTCGATACGTGGAGAGTGACGTAAACATCCACTATCGTGTTCCGGTGAGACACGA
CCCCTTGCCTCTGGTACCCGAGCGCGAGCTTGCGCGCCAGCAGGCAGAACACATGAAAAG
GCTCTACAGAGAGCAAAGGAGGACTAAATATTTACAGGAATTGCAAGATATGCAAAACCG
TCGTCATCAAGATAACTTCACGCCGTCACAGAAGACAGTCGTTCCCTTGAACCGATACGA
CGAAGCTGACAAAGTGACTGCAAAGTCTCTATATACCTTCAACGGGCAAACGCCAAGAGA
GCTCAGTTTCAGGAAAGGAGAAATCATTCACGTGAGACGCCAGATCGACGCTAATTGGTA
TGAAGGAGAAGTCCATGGGAAGATTGGATTGTTCCCCTACAATTATGTTGAGATACAAAA
AAGTGACATAGTACAATCTCCCAAGAAACCTGCAACCATAGAAGGTCGTGCACGTGCCAA
ATTCGACTTCATAGCGCAGACGAATCTCGAATTGCCATTGAAGAAAGGCGAAATAGTCGT
ACTTTCGCGACGCATAGATCAAAATTGGTGGGAGGGCAGGAACGGCGTCAAAACTGGTAT
CTTCCCGGATAGTTACGTCACAGTGTTACAAGAACCCACTCAGAGTAAACCTGAACCGAC
ACCGATACTAAGTACGGACAAACCGGTCGCCTCGCCTGCTGCTCACGGCTTGCTGAACGG
TACCGACAAACGAAGTATGGGTTCACACAGCTACACGCCGCAACCGAACAGTCCCGCACT
CGCCAACGCACCACCTGCCACACAACCATTACCAGGTTACGTGGCTAAACCCGCCCAAGC
CACGCTCACTCCATCGGACCGCGGCTACGGCCCACCGACGGGACCGGGAGTCGACCTTAA
CAACGCAGAGCCTTTATACGTCGATACCAATGCCGAAGCTGTGCCATATCGTGCGATGTA
CAAATACCGACCACAGAATCCCGACGAGCTAGAACTGCAGGAAGGTGACACTGTCTATGT
TCTAGAGAAATGCGACGACGGTTGGTACGTCGGTTCTAGTCAACGCACTGGACGCTTCGG
CACCTTCCCAGGTAACTACGTGGAACGCATCTGATAGCGCGAGGCGTCATTACTGCGACG
TTTGAGACGCGCCACATTGTGGACGCGACGTCGACGCTG
(2679 bp)

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