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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30016_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:0.64 TPM:0.64
ORF EntryO_SariMG13835_complete:A_SariMG_comp30016_c0_seq1
Sequence
(Nucleotide)
TCGGTATCGCGTTATGCGTCGTTATCACGTTTGGCGGGATCAGTCTGAGCGCGGCATTCA
TAAGAGACGCACGTCGCACGGCGAGATATAGTAACGTTTTCCGTAGATTTTCCGACCGTT
TCTCGCGCGCTCCTCTATATCTACTTCAGGCTACCACCCGCCTCCTATCGCGTCGCATCT
TGAAATGTCACCATAATAATATCAAATTAACGCTGTGTGGAGACCAGGGGCGCCATCGTT
ACCGCCAGGACCTGCACCTGCACCGAGTGTCACACGCAGTCCGGGCGCTCCGCCCCCGCC
GCCGCCGCCACCCGTGTGGGTGCCCGGCAGCGCGGGCGCTTCGCCCCAAGCTACGCGCAA
AACCTTCCGCCCCGTACACTTCGAAGAAACGCCACCCAGCCGCCGTAAATTTGGAAGTTC
AGATCAGAACGGTTGCACAAGCGGATCGGAGAGTGAAGGACGGCTGAAGACGTCACATAG
CGCACCAGTCACAGGACTAAACACTTTAGGAAGTCCGTCGTCGAGCAGCCGCCTTCCGCG
TGCTCCGAACCCTACGGTCACTTTACTTCAAAAAGCACGAGAAGGCCAAATTTCACGTGG
TGCAAGTTATCTTCAATCAGATAGAGATAGCGCACGCTTACCGCGAGACCGTCCGTCACC
ACCGAAGAGTGACCCAGTGCATGCACTACGAAAAGAATACGCAAGCGAAACTGAAGTGGA
AAGAAGCGACTACGAACGTGGAGGTCCTCGTAAAATGGCCGATGCCCAGAAGAAGATAGA
AGGAATCGGACCGACAACCAAAGACGGCATACCTGTCGCACTTAGATCTGAAGTCAAAGA
CCCTTCGAGGTGGTACAAAAAAATGTACGACACTATACACAAAAACAAGTACGATGACGA
TTATGTGACTATACGATACAAAAATCGCCGAGGTCAACCGGAACGCATATCAAGCAACAA
ATCTCAGTACGCATATTTCGATCCTCGTTCGGGATATCTAAGCGAACCCGAGGGAGGGCT
TGGACGATTAGGCTCAAGCACTTGGAGTGACGCATACGACAGCGATGTCGGTACGGGCCC
GCGCCGACGAACTGCTTCAGTACAAGAAGAAAGACGAAGCGACATCACCACTACATACTT
ACCTAGTAATAAATATAGTACTCTAGCATCAGCGAGAGCAAGCCAAGAAATGTATAGAAA
CCAACCAGGGAGAATAGAAAATTACGTACCCGGACGATCTTCTGTGATAGACAAAGAAGC
TAAGCAGTGGTGGGACGAGGTCATGGACATTTTTGATGGGCAAAACATCACAAGTACAAC
ATCTTTGCCTCAAGCATCGCCTAAAGAAAAAAAGGACATCACATCTGCCATTTTATCGAA
ATCAAACATGGCAAAAGCTCTTAAAGAATCAGGGTATGAATCGGACTCTACTCTCATTTT
CCGACGAAGAGAAGACACAGAAGCGCCATTGTCGCCTGCAGAGAGACGAGCTGCGTATAG
AGATTTACAAGCAGGTGGAGAACCGCCTTTAAGAGGGTTCCGTTCTCCAGCACCGCCTCG
ACAAGAAACCAACTCAGTCCCAGAACCACCTCGAAGAACACTACATGGGAGTTATTCAGA
TACAGAATCCCCTCGTCGATACGTGGAGAGTGACGTAAACATCCACTATCGTGTTCCGGT
GAGACACGACCCCTTGCCTCTGGTACCCGAGCGCGAGCTTGCGCGCCAGCAGGCAGAACA
CATGAAAAGGCTCTACAGAGAGCAAAGGAGGACTAAATATTTACAGGAATTGCAAGATAT
GCAAAACCGTCGTCATCAAGATAACTTCACGCCGTCACAGAAGACAGTCGTTCCCTTGAA
CCGATACGACGAAGCTGACAAAGTGACTGCAAAGTCTCTATATACCTTCAACGGGCAAAC
GCCAAGAGAGCTCAGTTTCAGGAAAGGAGAAATCATTCACGTGAGACGCCAGATCGACGC
TAATTGGTATGAAGGAGAAGTCCATGGGAAGATTGGATTGTTCCCCTACAATTATGTTGA
GATACAAAAAAGTGACATAGTACAATCTCCCAAGAAACCTGCAACCATAGAAGGTCGTGC
ACGTGCCAAATTCGACTTCATAGCGCAGACGAATCTCGAATTGCCATTGAAGAAAGGCGA
AATAGTCGTACTTTCGCGACGCATAGATCAAAATTGGTGGGAGGGCAGGAACGGCGTCAA
AACTGGTATCTTCCCGGATAGTTACGTCACAGTGTTACAAGAACCCACTCAGAGTAAACC
TGAACCGACACCGATACTAAGTACGGACAAACCGGTCGCCTCGCCTGCTGCTCACGGCTT
GCTGAACGGTACCGACAAACGAAGTATGGGTTCACACAGCTACACGCCGCAACCGAACAG
TCCCGCACTCGCCAACGCACCACCTGCCACACAACCATTACCAGGTTACGTGGCTAAACC
CGCCCAAGCCACGCTCACTCCATCGGACCGCGGCTACGGCCCACCGACGGGACCGGGAGT
CGACCTTAACAACGCAGAGCCTTTATACGTCGATACCAATGCCGAAGCTGTGCCATATCG
TGCGATGTACAAATACCGACCACAGAATCCCGACGAGCTAGAACTGCAGGAAGGTGACAC
TGTCTATGTTCTAGAGAAATGCGACGACGGTTGGTACGTCGGTTCTAGTCAACGCACTGG
ACGCTTCGGCACCTTCCCAGGTAACTACGTGGAACGCATCTGATAGCGCGAGGCGTCATT
ACTGCGACGTTTGAGACGCGCCACATTGTGGACGCGACGTCGACGCTG
(2808 bp)

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