SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp30002_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ralBP1-associated_Eps_domain-containing_protein_1_[Amyelois_transitella]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:6.77 TPM:6.79
ORF EntryO_SariMG13777_complete:A_SariMG_comp30002_c0_seq1
Sequence
(Nucleotide)
GTTCTGTCAGTGACATTTCGTTTGCTTCGTGTAAATTTTGTAATGTACAAGTATAAAATC
CGTCTATTTTAACTGAATATGATTTACATTAATAGATAATGATTATTATTGCGAACAGTC
TAACTGTGTAGTAATATAATTGTGTACAAACGAGTATAAAAGTATTTTTTAAATTATAAT
GGAGGATCTCAATTTGACAGAAACCGAAATGAGATATTTCGGTGATTTGTTTTTATGCTG
TGATGAAGAATCCAATGGAAAAATACCTATATTAAAGGCAACGGAGTTATTTAGGTCGTC
TAATATACCAAACGAAATTCTTAAACAGATCATGGACATAAGCGTGGCTCCCAATTCTTG
TATATCACTAAATCATATGAATAGAAAACAATTTTATTCAGCACTTAAATTGATAGCTGC
ACATCAGACAAATATGTCACTTAAGCCCGAACTATTGTCTACTCCACTCGACTTACCTCT
GCCGAGGTTTACATGGGCGTTAAATTCTGAAGCGAGTGCAGATTTAATACAACTATCGAG
TTCTCCTAGAGAACAGCATGTGTCTAAACGTGAAAGGAACTTTGTTGGAAGCCTTGGTGC
TTATGAGCCAATTAGATTGTCATCTAATTTATCAGATAGTGATGTTCCACAAGCATTATC
ACATGATGCAACAGAAGCTCTAAGTACAGATTCTGAAATTGAATCTGAAACAATGTCACA
GAGATCTGGATCTCATGGGCGGCGAGCGAAGACGGGATCGCCTTGGAGTACTGCGAGCGA
GAGTCCCACGCCAACAAACAGCGTAGCAGAGAAAGTGCATCCTGTATGGGAAAACAGTGC
TACAGGCCGCGGTGTGTGGCCAATAAACACAGGAGAAGAACATACAAGACTGTTGGGTAC
TGAAGAGGAATCATCAGATCGCCATTCGTCTGAAGAGGAAGGTGATGTGGAACCCGGAGA
TGATATATGGTCTATTAGTAAAGCTCAAGCACATCATTATGCCTCTCAATTTTCTCAGCT
GAGACCTGAACATGGTTTACTTTCTGGCCAAACAGCTAGGTTGTTTTTCGAAAAATCCAG
GCTCCCAGTACCAGATTTGCGAAAAATTTGGCAGCTTTCTGACATCACTAAAGATGGAAT
GCTCACATCAGAAGAATTCAGTATAGCCATGCACCTGATTGTATTACGGCGAAATAATAT
ACCTGTGCCTGACGTGTTGCCCTCTCCACTAGTACCGAAAGTGGACTCTCGTTTCTCCCA
GCGAGCCGTCACCACCGAACTAGTAGACCTCGGCGCCGACATGTTCGGCTCCGGTACTTC
TGCGGATTTCAACTTTACACCGAAAACGGAAACAGCCGATCCTTATGAAACGAAACCTAT
TCGACGTATCGACGAGCGCCGGCCGTCAGCTACGTCTCCGAAAACGGATTTGCAGTCCAA
TAACAAAGAATGGACCAAGTTTGTCGACTCCCCGACTTCGAGTGTCTCCAGCCCTGGTCC
CAAACCAGTAAATTTCGACTTCCAGCGCGCCGCCGTCGAGCGTGACCCAAAGATTTTTCA
TCCCGTAGCATTGCGCGTAACACCTGATGCAGGTGCGCCAACCACGAATGAAGCGGAAGC
ACGAGCTAGTGCGTCTCCTCGCCGCGATGATCTCGCGCACGCCTTTGACCTCGCTAGTCC
GAAACGCCTGCACTCCCAACCGCCAGCCGAGCCACCACCCAACGGTACGCCGGCGGACAT
ACGGCCCGTGCAGCGACCGCAACCTCGGAAACCAGTCAAAAGTGCGGGCGTACTGCCGCC
TCCGCCGGCGCGCGAACCTTCCATGCATGTCGAAGAGGGTCCGCACTCCTTGCAGTCAGT
CCCGAGGAAGGAGCCACCACCGCCGCCGCCGCCGCGGCCCCTTCGGAACCATGCGCGGTC
GAGCTCCCTTGATCTGACACGACTGAAGGGCGGGCCGGCGCCACCGCCGCATCCTCCGCC
GCGGACGTCGCCCTCTGCCCGCGCGGGCGAGCAGGCGGGTGAGCCGGCGCGCGAGTACGA
CGCCGAAGGGTTCGGCTACAACCGGGAGGACGCGGCGCGCACGCAGGGTGCATTCGAGGT
GTACCGCAAGCCGTCCCGCGAGCCCTCGGCGGAGGCGGACCCCGATGTGAAGGCGCTGCA
GGAGCAGAACGCGGTGTTGCACCGCGTGTGCCGCGCCCTCTGCGCCGAGCTAGGCGACGT
ACAGCGGGAGCGCGAGGCACTACGCGTTCGTCTCGAGGACAACTCGACTCCGGTGTAGTC
GGTGACGTCTCCTCTAATAATATTTTCATTCGGTTGGTCTTTCTTGCTGCGTTTGTGTAA
TCATTTGCGAGCCGTGACAAAACTAAATCATGTATCGCCATTTTGTCGCCGAACAAAAAA
GATCGTATTGTATTATAGTCGTCTTACTAAAAGTTGTAGGATGTCATAATTGAACTTCAT
AGCAGAGTGAAATTTAATATATCCTATTTTATTTCAATTTAAGAGGCTATTTCTGGAGAA
CAAAACTAAAATCATGAATGTATAATACTATACTAGTATTCCTTTGTCATTTTGTAATGT
AAATAAAAAATCACAAAAAAA
(2601 bp)

- SilkBase 1999-2023 -