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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29956_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_lark_isoform_X1_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:2.27 TPM:2.28
ORF EntryO_SariMG13550_5prime_partial:A_SariMG_comp29956_c1_seq4
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTACTTAAAATGATATTTATTTCAATTATTTACATTTCATCACTAA
AATATAGTTCACCATTTCATCACACAGTCGCACGTTAACAACCAATATCAATCATCACCA
AAACCCACTCACAGCTTATTGATAAATTGTCTATAAAATTTTGTCAGACAGTCAATTCCT
ATAACAAAAACGTTGCATCATCTCTTATGAACTAACTTATGTCTAATAAGGCGCATATCT
CCTAGAGGGCGACGGTCCTCGCATCCCCGGTCTTCTATCATCAAATGTGTCACGGCTAAA
ATCTTCATACATCCCCCGGGACATTTGAGGTCCTGGCGGAGGACTCCTTCGGTTGAACAT
TACATCATAGGAGGATCTCATGGATCCCATCCCGCTGCGCATCGGAGGCAGGCTCGGCAT
CGGGGGCATCGGCTCGCGGCGCAGTGGGGGCGACACGAACTCACCGCGAGCGCCGCGAGA
CGCTCCCATATCTAGCCCCCGCGATCCCGCCACCGGGTATCGCCGCTCGAACAGATCACG
TGGCGAGTCGAACCTTGCACGGTCATAGTACCCATCGTACGGATCCTGTCATCATACAAC
AACTCATTTGGTCTAAAGCATAGTTTTCACCCAACATAAAATAACAACATATTATAGATT
CGTTTATACGCATCGAGTAAGCGGCGCGAGCCAGTATGTAGCATCACCGAGCCCGGCGTG
AGAGAGTCGGCCCAAGATAGGTATCGCGTGCGAACAGTTATCCTCGCGCTCGACCTAAGT
GATGCGGAACTTTGAACCGACGGTTTATTAAGAGTGGAACGCGTTACCCCAAATCCTCCC
ATCATGCGATCGCGGAGGAACGGCGGCGGCGGCGGCGGGGGGTAGGGGTCGCGACCGAAC
GCTCGATCGCGAAAACCGTTGCGGTCTGGTCCGAGCGCCTTGGGGCACTCCTTGGACCAG
TGGCCGCCACGACCGCATCGGTAGCACTGCTCGGGATCGCCCATGCCCGGTCGCTGCCGG
ACGCGGCTCGTCGACAGCTGCACCTTCATGGGTTGCCCGTCCACCATCATGCCATTCAAC
TCTTTGATGGCCTCGTTCACGTCACCCGTCGCGTCCAAATGTACGAAGCCATAGTTACGC
ACGATATCGCACTCGACCACCGTCCCGAACTTCTGGAACAGCTCGCGGACCTCCGGCGCG
CGCGTCTTGTCCGTTAGGTTACCGACGAATATTTTAGTGGTCGGCGTCGAGGGCGCCTTC
CTGCTCTTCGCCGCCTCTATTTTAATTCCCTGCCCATGAACTAGCTCACCGTTTAAGTTT
TGAATAGCTTCCCGACCGACTTGTTCGTTTTCCATGTGGACGAAACCGTAATTTCTGACG
ATATCGCATTCTACGACCGTACCGTACTTTTCGAATAGCGGTCTAAGATCAGCGTCTGTC
GTTTTATCGGATAGGTTCCCGACGAAGATTTTGAAAGTACCGGCGCCCGGCATTTTAGTT
TCGACGTCAGCAGCTAACACAGAAACTAAAACACTAACGAAAACAAATAACACAGAATTT
AACGGTATAATTTCCACGCAACACGCAGTCTCAGATCGACAACAAAATGGCGTTTTTTTT
TTTTTTTTTTTTTT
(1634 bp)

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