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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29949_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		Pre-mRNA_cleavage_complex_2_protein_Pcf11_[Papilio_machaon]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
Transcript
Level		FPKM:1.16 TPM:1.16
ORF EntryO_SariMG13497_complete:A_SariMG_comp29949_c0_seq3
Sequence
(Nucleotide)
TTTGAATTGAATAGGTGTATAATAACGGTAAACGACGGATAAAGGGTACAAAAATACCGG
CGACAAGAAACGTCAATATGAATACTCCAAACTTCAAAAATATTTTATTTCCACACAACA
TGTGTTATATTTGTCGAAACCCGCTTATAATCTAATATCACAGACGTAAATAACGACTAG
ATTTCTTTTGTTTGTTTTTTTTTTAATACTTTATATAAGGCTAACCCCACATTCGAGTAA
CATTTACAGAGATCTTACTTGATGCGTCTGGTTCCGGGGTCGATTTCTCCATCTCCTTGG
CCTCGGGGGCTCTCTCCGGACTTTCGGATTTCTCCTTATTACGTCTCATATAACGTTCCT
TGTGGTAATTTTTCAACTCTTTGAACTGAACGATCTCGTTTCCGGGCGCTTCCGCCGGAT
CTGTATCGACGCGAGGCTCCCGTTTCTTCTTGTTCTCCCGACCCTTGCCGGACACTAAAC
CCTCTTTATTATTATCCCCCTTCTTCTTCTTGTCTCGTAGACCCTCCTTCCTTCGTTTGG
GGGGTGCCGGCGCGTCTCGGTCTCGGCCCGGCGGCTGCTCGTCCCGATTTATTTTCGGTA
TCGGCGGCAGTTTGTTTATTCTACGTGGATCCACTAGCTGTAGTTTTTCAATGTACGCGT
CGACATTGTGATTGGTCTCTGGGGTCGGGGTCAGGGTCGAGGGTGGGGGTGCGGGGTCGC
GCTCGGCGGGGACGCGGCGTCGCGGGCGGACACGTTCCCGACGCGGTTCCCGTTGCGAAC
GAGACGGGTTGGGATCACGGCGTCGGGGGTCTTGCCGCACTTCACCGACATCGGTGCGCA
CATCAATCGTTATCACATTTTTCCGTTTAGTTACGGCACGTTCGAGTGGTTTGATGTCGA
ACACGTTCGGCGCTATGGGTGCGGCCGCGAGGGGTGCGACCACCGGACCAGTGACCGGGA
CGGGTGTCGGTGGTAGTGGTGCCAGCAGTGGTGTTGCCAACAGTGGTGGTGGCTGACGCC
TCGCGAGTCTCGGATCGCGACGAGCAGAGATCAGCGCCGCGCTGACCGGAGCTATTCGTC
CGCTAGTTTTATTCACCGGCGGACCAAGTCTCTGCTTAATCGGTGTGTTGATAACTTCTG
GAGCGACCGCCATAACGGGCGGGACCACGGGATTGACGAGAGCTATGGGCATCGCCGGCG
AAGGTGTTCCAGTTGGAATAGTTGTTGTAATTTTTTTAGCGTTTTTCTCAGCCAATTCCA
ACTGTTTCCTAGTCTGCTCTAATTCCATTTCAATCTTCTTTTTTTGCAGCATCAGCAATT
CTTGCTCTTTCTTTGCGATTATGTTCCGTTCTTCCTCAGACAAGACAGGTTGAGCTGTGC
TTGTCGTTGGTACAGTCTTTTTCAGAAAATTTGGATTTACATGGATGTTTGATTGTTGCG
GCTGCGCCTGGATCGGCCACGCCGGGTCAATCAGGTTCACTTTCACGTCCAACTGGTAGA
GTTTCGTCGCCGGGAAAACGTCGTGCCACGTCTCGCGCAGTTTGAACATTTGCGATCGAG
TCTTCTCGTCGACCTGTTTAAAAGTCCTTGTAAACATGTTGACAATGCTCTGTGAGAATT
TCTGTGTGTAAGCCCCGCCGACATTCTTGATAATCGAGTCAACTAAATAAAGTACCGGCA
GCTTGATCTCTGGATGAACCTTCTCCAAATGCTTCTCCACGGTTTCAACAATAACGCCAG
CATGATCGATGTTTTCTTCAGCTAGGATTGTGAGCATATTTATCAAAGGTTTGCTGTTCA
CCGTCAAATCCGCCAGACTTGACGCATACTCTTCGGCGATTTCCTTCGACATCTTGCACA
AACATACGCGATGTCATACCAAACACAATCATCAACCGCACATCAGTTATTGCGGAAAAC
AAACAATGATGATAAACGCACAATGACGGCAATCGTAGCACGTACAAGCTAAATGCACAT
GATTGAAATATGTTTAAATCACGTAATAATCATCAGTTTCCAACAACGATAATTTATTGA
TATGTATTGATGTAACTATAACCATGGGCG
(2070 bp)

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