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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29949_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106713977_[Papilio_machaon]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
Transcript
Level		FPKM:3.65 TPM:3.66
ORF EntryO_SariMG13493_complete:A_SariMG_comp29949_c0_seq2
Sequence
(Nucleotide)
TTTTAAAATTACGCAACATTAGTTGGTTAAGTACCATATTGTTTATTACTTGATTAAAAT
AATTCGATACACATTTTTAAATTAACTTAGAAATAAGGGTAGTTCTTTAACATACCAGCT
TGGTGAGGACTGCATTGTGGGCCATAATCCAAGAACATCACCAACTTCCATGAGCCAGCC
TTTAGGATTAATATATAGTTCGATTATTATGCACAAGTGTATTGAAAATAGAAATGCAGT
ATGTTTATTCTAAAGTTATACAAAAACTTCCTGGTACATTCTAGCAACATGGCGGCAGAT
ACAATATTCGTAAATATTGACGCTTGTAGAATTGTTTATGTCACTCGCAATCACAACACT
TAAACTATTCACATAATGGAGCAGAGTCCGGAGAGTTCCTTATCCTTCATCAGGGGCGGT
TGCCTACTGAACTGGACGCCTTCAAGGCTCGGCTTCAGCTTGTACTCCAGTTCCGGTTCC
TCGCCAGGAGGGAGCGGTTCCTCGTCAGCGCTGACGTCGTCCAGCATCCTGTCCTCGGTG
TGGACAGCCGAGGGTATCGACTTGGTGATGTTGATGCGGATACCTCCGAGGGGCAGGGAG
GAGAGAGGAGCCGACGTGGACTCGAGCTGCGTGTTGCCGTCAATGGACGACAGTACAGTC
GTATGCATCATGTCTCCACCGGATAATATATTCTCCTCTTCTGCTGTTATTATTGGCTCA
TCATCGGGGTCGATGGGTTCCTGCTTGATGCGAACGTTCGAGAAGTCGATGAGGGCGCGC
CGGTCGCGGTCCGCGCGCTCCGCTGTCGTCTCCTCGTCCGTGTCGGCGTCGTCCTGCACC
ACCACCTCCTCTATCGGTTCCGCCTTCAGCACCACATCGTCCTCGTCTCCCTCCGCCTCG
CCCTCGCCCCCGACCACGCCCTCCCCCTCGCCCTCCGCATCCGAACCCTCATCGATTTCA
ACGGGTTCCAGTAACTCGACGTCGTTGGGTTCGACGACTTCGACGACGGACTCGTTGTCC
GACTGCTCGGCCGACTCGTCGACGTCTTTAATCTCTATCGCCTCGTCTTGGATCTTTGTA
TCGGGCGCTATCTCTTCTATTTTCGGTTCTTCCTTAGTTAGTGACGCCTTGTAGTCTTCG
AAACATAGCGGATGGTAGTATTTATCTTCGTGCGTGAGAGAGTTGCGGAGGTGCCACTCT
TCCTTGTCCTCGTTGTAGAACTGGTCGAAGCAGTCGCCGCAGAGGGCGCAATGCCGCGAG
TGCGGGGGACCAGCCGCCACGCTGGGCGCGTCCACGCAGGGCTCCGCCCCCGGCGCGCCC
GCAGCACCGGTCGCACCGCCTTCACCAGCGCCCTCTAACCCGCCGTTCTCGAACCAGTTC
TTCTCCCTCTCGTCGAGTTCCTCCAGCTCCTCGTACTGCAGCCAGTCGGAGAGGTCGTAG
TGCCAGTGCCGGCTGTGCGCCCTCCGCGCCGAGTCCCGCTCGCGTCTATTCTGGCGGAAG
TGCCAGTCGAGATGCTGCGAGTACCGCACCGTGTGCTCCGGCGGGAACCGAGTCCCGCAC
CCCGAGCATTGCATGCCCCCGTACAGTTTACTTACGATGCCGGGCTGTTTCCCTCTAAAT
GATTCCGGTTTGAACCAATCAACATTACGTATGACATTTTTATCTTCTTTCAGATTTACA
TTCGCTTCTTCTGCAACTGGTTCGGTTTTCTCTTCTTTCTTCGGCTCGCTGGGCACGTGT
ACTATACCGCTCGCTACTAATTTAGCGAATAGATCGGTAACGTTAATGTTGCTAAGTATC
GGGAGTACAGGGTTCGGTTTCTCGTCAGCCGGTGTCTCTAAACCGGGTATCTTATCTGGC
TTTGTGAATAATGGTTCAGCGAGACTGTACTCTGACGCTGAAGCCGGCGCAATACTCGAG
GGCATTACGCTTGCCAACATTTCCAAACCTTGACTTTCGGTGTTCATATCAGGGCTTGGT
GTTTTGACTGGCCTCGGTATATCTTGATCCTCGGTCGCTGTGGTCTCTTTGACGTCAACA
GACGCCGTGACTGCTGCAACTGAGGGTACAGTAGCACCCTCCATACCTGCTATCTGAGTG
ACCCCAGGCTTTATATTCCTAGGTAGAGCCGAGAACCTAACAAAGTATTTCTCGTTCCCA
ACAGTTATGGGTTTGGGTAAATCTCCAAATTCGATTTTAAATGGTTGCTCATTTATTAAA
ACAGTTTTCAATGAATCAACAAATCTAATTGTAAAGAATTGTCCGTTTATTGCGAACTTT
TGAACCTTAGCGTCTAAATACACGGGGCACATTTGCGTCGCGTTCACGATTAAGTTAATT
TTGCCGGCGACTAGATCCGTCCGTTTCGTTTTCCCAATGTCCACTTGTGGTAGGGGACCT
TCCAAATGCACCAGCCTGGGTTTCCCATCAATTATAACACCCAGAGGCTGACTGCCGAAG
AAACATTCGTACCACCTCCCGTTAATATACAACTCTCTAGTTGGAGCACCAAATTTAATG
TCGAACACTTGGTCGTCGATTTCGACTTGCTTGTAACCTTCGTTAAACGATAGCACCACT
GAGTCTTTATTGTCGAACGTGACGCGCCTGCATCCGGGCAAGAATTTGATCTCTCTCGGA
TCATCCCAGTCCAACATGATAACCGCCGTGTCATCGTAAAACCTAATCTCTCTGGGTACT
CCATCAATCTGTATAGTTTTAACCGGATCCTGATCGATATATTCCAATATTTTGAAATCT
GTAGGCGGGATGGTTAAACCCGGGGCTCCTAGAGGCGGTGGTGACTCACTTCTCTCATAA
GGCTTTAGAGGACACTCCCCTTGAAACATACCAATTTTGGGCGTCGGCAAAGGCATCGGT
GGGCGAACGTCGAAGTTAGGTCTGAATTTCCCTCTAAAGAAAGGCGGGACGGGTCCTCTG
AACCTACGGGGCATGAACTCGTCTGGCCTTGGTCGAATTTGACCTCGCCAAATCGGTTGG
AACGGTCCATACATTCCCATAGCCATTGCCATGGGGGGACGAGGCAACAAGCCTTTCATT
TTAGGACCGTCGACTCCGTCTACGTTATGATTATTCCTCATGTCTGAATCTTGCAAGTAG
CCCTGGAAATCTGGTGGATTCTCGATAAACACAGCAGAATTAACCCTCTCGTCGATATCT
CCAAAGTTATTCAATTCGTTTGGTGACGACTTTGGACTGGGAACTTTATTATTCTCATCG
TGTAAGTGGGCTTTGAGTTTCCTCTTAGATACTTCCAAAGATTCTCTTTGCTTTGCCTCC
TTCAATTTCAACTTCTCGTTCAACTGTAGTACTTGGTACATTAGAGTATTGTATTGGTTC
TTGTCTAACTGCCCGTCGCTATATTGCTCTTTGGCCTGTGACATGATGATGGATATTGTT
TTCTTATTATCTTCCGTGTCGAAGTCTTCTCCGTTTTCATGTCTGATATCAGTGTCTTCG
GAGCTTAGTGTACGTCGTCTTTCCTTTTCTACACTAGGAGATTTGCTGAACAATAGCGGT
CTTCCAAGTCTATCCTTCCCCTTAGTGGCTTCCGCCAATTTAGCCCTCACCAGGTCCAAT
TTCGATGGGGTTTTCTTTAATTCTGATTTATCTCTCTTCTCTTTAACCTCATGCCAATCT
TTCTGTTTGGGAGAATACGTCGGAGAAATAGTGATGTCAGCCTCATTCATTTCCTCATCT
TTGTTTGGGGATTCGGTGATAGAAGACGCCGGTGGAGCAGTGCTTACTTCTTCTACTTGC
GGTAGCTTACGAAGATCCACATCCTCGTTACCGAAAAGTATATCAAACTTATCAATTTTG
GCTTTCTTGGTCTTCCCTTCCAGAGTCTCAGTGGAAGGTCTCTTTTGAACGACGGGAGCT
GCATGGGTTTCCACCACAGAATGTAACACCCTGAGGTCAACATCCTTGTTTTCAGCTATC
ACTTCCGGTACATTTGATGCGTCTGGTTCCGGGGTCGATTTCTCCATCTCCTTGGCCTCG
GGGGCTCTCTCCGGACTTTCGGATTTCTCCTTATTACGTCTCATATAACGTTCCTTGTGG
TAATTTTTCAACTCTTTGAACTGAACGATCTCGTTTCCGGGCGCTTCCGCCGGATCTGTA
TCGACGCGAGGCTCCCGTTTCTTCTTGTTCTCCCGACCCTTGCCGGACACTAAACCCTCT
TTATTATTATCCCCCTTCTTCTTCTTGTCTCGTAGACCCTCCTTCCTTCGTTTGGGGGGT
GCCGGCGCGTCTCGGTCTCGGCCCGGCGGCTGCTCGTCCCGATTTATTTTCGGTATCGGC
GGCAGTTTGTTTATTCTACGTGGATCCACTAGCTGTAGTTTTTCAATGTACGCGTCGACA
TTGTGATTGGTCTCTGGGGTCGGGGTCAGGGTCGAGGGTGGGGGTGCGGGGTCGCGCTCG
GCGGGGACGCGGCGTCGCGGGCGGACACGTTCCCGACGCGGTTCCCGTTGCGAACGAGAC
GGGTTGGGATCACGGCGTCGGGGGTCTTGCCGCACTTCACCGACATCGGTGCGCACATCA
ATCGTTATCACATTTTTCCGTTTAGTTACGGCACGTTCGAGTGGTTTGATGTCGAACACG
TTCGGCGCTATGGGTGCGGCCGCGAGGGGTGCGACCACCGGACCAGTGACCGGGACGGGT
GTCGGTGGTAGTGGTGCCAGCAGTGGTGTTGCCAACAGTGGTGGTGGCTGACGCCTCGCG
AGTCTCGGATCGCGACGAGCAGAGATCAGCGCCGCGCTGACCGGAGCTATTCGTCCGCTA
GTTTTATTCACCGGCGGACCAAGTCTCTGCTTAATCGGTGTGTTGATAACTTCTGGAGCG
ACCGCCATAACGGGCGGGACCACGGGATTGACGAGAGCTATGGGCATCGCCGGCGAAGGT
GTTCCAGTTGGAATAGTTGTTGTAATTTTTTTAGCGTTTTTCTCAGCCAATTCCAACTGT
TTCCTAGTCTGCTCTAATTCCATTTCAATCTTCTTTTTTTGCAGCATCAGCAATTCTTGC
TCTTTCTTTGCGATTATGTTCCGTTCTTCCTCAGACAAGACAGGTTGAGCTGTGCTTGTC
GTTGGTACAGTCTTTTTCAGAAAATTTGGATTTACATGGATGTTTGATTGTTGCGGCTGC
GCCTGGATCGGCCACGCCGGGTCAATCAGGTTCACTTTCACGTCCAACTGGTAGAGTTTC
GTCGCCGGGAAAACGTCGTGCCACGTCTCGCGCAGTTTGAACATTTGCGATCGAGTCTTC
TCGTCGACCTGTTTAAAAGTCCTTGTAAACATGTTGACAATGCTCTGTGAGAATTTCTGT
GTGTAAGCCCCGCCGACATTCTTGATAATCGAGTCAACTAAATAAAGTACCGGCAGCTTG
ATCTCTGGATGAACCTTCTCCAAATGCTTCTCCACGGTTTCAACAATAACGCCAGCATGA
TCGATGTTTTCTTCAGCTAGGATTGTGAGCATATTTATCAAAGGTTTGCTGTTCACCGTC
AAATCCGCCAGACTTGACGCATACTCTTCGGCGATTTCCTTCGACATCTTGCACAAACAT
ACGCGATGTCATACCAAACACAATCATCAACCGCACATCAGTTATTGCGGAAAACAAACA
ATGATGATAAACGCACAATGACGGCAATCGTAGCACGTACAAGCTAAATGCACATGATTG
AAATATGTTTAAATCACGTAATAATCATCAGTTTCCAACAACGATAATTTATTGATATGT
ATTGATGTAACTATAACCATGGGCG
(5785 bp)

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