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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29927_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hypoxia-inducible_factor_1-alpha-like_[Bombyx_mori]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:5.55 TPM:5.56
ORF EntryO_SariMG13407_complete:A_SariMG_comp29927_c0_seq5
Sequence
(Nucleotide)
AGAAAATCGTCTGTTAAAACTAAAATACATTATTTGAACTACAACAATAGAATTGTACGT
GGAAAATAAATAAGATGTAAAATACTTAAGATTAAAATGAAGTTTGCAAAGAATATAATT
CTAAATCTAATAGAATTAAATAAAATAGCGAGAATTATTAGGTAAATTGATTAAACAAAT
AGAAGGTTTAACGAATTTTTAGGAAATATTGTACCCGTAATCGATTTGGTTTTATTTTTC
GGTGGTAGTGGTGCTAGATATTACATGTAGCGTTTATGTTTCATTGTTATTATGCCACCT
TTTTAGAAACAAGGTTAAGAAACGCTGTCTAATAATATATACTTACTATGAAATAAATTA
ATCTATTTAATTGTGGGAATTAACATAACATTGAATACTTATAAATTAACTTATTAATGT
CTAACGAGATTTAGTTTTAAAGAAATATAATTGCATTAATTGAGGTTTCAGGTCAGTAAA
CAAGTTGTACTTAAAAAGTGTACGGGTGCGTTTTACAAACATTAGCAGAAAAAAATAAAA
AAAATATTTATGGGGAAGTATTATTATTATTATTCGAGTGTGGATTTATAGGGAGGGCAA
CTTTAATAAAAATACCACACGAATAAAGACTGTCATTTATTTCATCATTTTCTAGATTTT
ATTTAGGAGAAACAGTGCAAATTCGGTATCAAAATTTACGCCTTCATTTGTCAGCGGTAA
TGAAGTACGTTCAAAGATTGTGACATTCGGCAGTGACGGTCGCTTATGGGTTATTTCCTT
AGCTACCTGTTGTAATCAATATTGTAAAATTGTATTATAGCCTTTGTTTCCTAATAATAG
TAGATTTAATTCATACATCGGTTTATTTAATGCGATGTGACTGAATATTTTTTTATATAT
TGTAAATTAGGGAAATCATCCATACAATGTGTTTTCTTACCTTTTATTGAGTATATAATT
TTGATCATAATTAATGACTTAAAATGTAGTAAACTCATTATGAAATGTATTGAATTATAT
TAATATATCAATTCAATTAATATATATAGGACATTTAATAACGATCATAGAGCCAATTTT
CTTTTTAAAAATATTTTTCATAAAACTACTTAAAATTATAAATGAGACAGAAACGAAGGT
ACGTATATTCGTAAGTGGAACACATTCCAGAATAAATTAAAATGAATCCACTCATCATTG
TTAAGTTTATTTTTGAAATCATTTATCTGACGCAGACTTACATCACTACATTGCAATACC
AATGTATTTTTTTTTAATAACAACTACAAAATATATAACTTTCCTCTTTTTATTTTTTTT
TTATTGACAGAATAAAAATCATACACTGATAAAATTGATTATATAGATATATTAAAATCA
TATTTTTGATTTTATATCGACCTAAGGACGTATTTGTTTCATTGATTCACAACATATTAG
ACTTTTAAAAGCAAAAATTGCATATTTAGTTTATTTTTTATATTTTTCTGTCTTCATTTC
TTATATATATTAGATAAATCTAAAAATAATAAACCAACACTTTTATATATGTAGGTAATA
CAGACCTACATAATATAAGTAACATGGTAGTTATATACGCTCAATCAAAACATAATATCT
TTATCTAAGTCATATTGTTGCATCACCCAGGATTCCGCGCAATTCTTGTATGTACGTGGG
AAGAGACACTTAAATTACAATGCATTTATAACAAACTCATACTATAGTGTAACAAATAAC
CAGCGTCTAAAAGTAAACGTTTAAATAATGTACCATTTGCACACGCAATATAGAACAACT
GCTTTGGTTAAAATGAGAAGCACGTCTGGAATCCTTTATATTGATCCTACATTTTTTTTT
TGCGACCCTGCACTTATTCGAGTGATTTCGATCTACTTACTTACATAAATACATATATCT
CTTGGAATTCTTGTGCGCGAATAACTGAACGAATTTGATAATAGATGTTATTTTCAATAT
ACAATTGTAGGTAATCACTCTTCATTGCCTCGTTCGAAAACTCTAAACAAGTTTTACGTC
ATCGAAAGCTGTTAATAAGTCGCTGGTGCCTTGCAGAATGTCAGTGTCGTTCCAAAAGTC
AGATGAATTCAGCGGTACGTTTGAATCAAGGATCATGTCTGAGGACTGCATCTGATAGCC
CGGGCTGGGTTGCATTTTTGTTGTCAGATATGGATCGCATCCTTGGATAACGCCGACAGG
AGAGACAACCCTACTCCCCGGACTGTATACCTGGTGAAATTTGCCCACCGGGGATAGTAA
TTGTGGCGTAGAGTAAGGACTCATTACGCGCTCCCGTTGAGCTGGACTCATCGCAGGGCT
GTTGTAACTGCTTGGACTGGACGGCAGTGAATATACGGGACTGCCTAAACTTAAACTTAG
CGGTGACATGGGACTATTTGTCATATTGGTACGCATGGTATGTGTTAGAATAGGTGTGTT
GGTACGCATGGTCTGTGATATAGGTGTATTGGTCATTACATGGTTATTTGGTCCGGCCTG
TATTATGTTTATTGCCGGTATGGGCATGTTGTTCCCGTTTATGTGATTTATTTGTGAGCC
TAATTTGTGTATATTTCGTAACAAGTGGTAGTTTGCTTGGATGTGCTGATTCTGATGCGG
AGATTGTTGCTTTATATCCAGAAGGTTCATGAGGACGCTCGAAGACGGTTTATTGGAAGT
AGGCGCTAACGCTGGCGATGGACTACGTTTTGCACGTTTAGCACAAGGTTCTTGTTCTTC
CTTCATCACTCTTTTGATACCCGTATCCCACGCTGAGACGCTTCTGTTCAATATAAGACC
TTGATTTGAGTATATGTTCTTTACGAGATCCTGTGGGGGTGGTCCCGTCGTCGATGCCGT
GAGTAGACGTTGTAAAGCCGGTGCCGGCGATACATTATGCGTTTCCGAAGGTTGGGGTCG
TGCAAGACTAACGCTGTCTGGCAGAGCGCCCCACATGACAGCTGGCTCCAATACTGGGAG
TTCATCGCTCGTCGGTATAAAGGGTGAGTTTCCGTCATCAATATCGTTATCAGACTTTGT
ATTATCAAACGCATCTAAAGATAATTCTGTTAATAACGACGACTGTTCGCATGACGAATC
GTTTTCCTGAGGTTCAGGCGATGATAGTAACAACGAATCAGGTGTGAGCGCGTCTACTGG
TGATGTACTTGCTAAATCGTCTCCCAAAAGACTGCAGTAATTATCGCTCAGAATAAATTC
GTCAAACATGTCAAAGGGGCTATTCTCCAAAGGAATACATGCGTCACCGGCCGTCGGTGC
CAAATGTGTCAGATCTTCCGGCTCGTCTTTAAGCATTGTAAGTCCCTCGTCTTGGGAAAA
CATGAGAAAGCCTTTGTTCATTTCTTTCTTTCTTGGTGCGAATAGGAGCTCTGTCACCGG
TATTGGTCGCTCGTCCTCTGGAGGTACGATAGAAACTATAGCACCGTTCGGTGCCGGTTC
GACTGGTTTGGAGAGTCGAGGGGGCGCAGTTGCGACCGATGATACCTTCGGTTTCAAATC
AGCATGCTGCAATTGATGTGCCGCAAACACCTCATCTTTGCACTCGATACCGCTGATGAC
GTAATTGACGCATACGACGCTGACTGGTTTCTGATGTTTGTCGGTGACCACCGTTGCCTG
GGTCTGGACCCAAACGTAGCCGCCGGTTTTCGCCAGAAAACGATACTGTCCTGTTTCGCA
TTGTCCTTTGGAAAATAATGATTTGAACTGTTGAACCATAGAAGCGCTGTCGGCTGCATG
ATGATAATCGTAGAGAGAATGGCCGATCAGCTCCTCTGGATCGAATCCAAGTATGTTCCA
CAAAACTTCATCAACATATGTAAACTTCATATCCAAGCTGTGTTGCGATAGGAAAGTCTT
CGTGTCCAATAGTGTTTCAATGTTCGATGGATGCGCTATTGGCCTTCCAACAGCCACTAG
TGAACCAGTTTTTACTTTCTTATCTTCGTCAGATTTCTTGTCTTCATTCGTATTATTATT
ATTATTATTATTGGTTTCTTTGTCTTCCGAAGGCATCAGCATGTGACCGGTGACGTGGAT
CACCTTGTAAGAAGCAGATTTAAGATGGACACTTCGACCTTTGCTCGTGAGAGTACATTT
AAGACGCAGCAATAGATCACGTCGAGCGCTTCCATTGCTAATACGAAGTGCTTCGCGAAT
TTCATCATGATCGCACGGATGACTGAATTCAAAGACGCTTTGGCCCATTATCTCCATCTG
TGACACGCCGAGGTGATCGGCAATATTCTCGCTGCAGTAGACGATGTCACCCTGCTGTGA
CATTACAAAGACGAAACCATCTAATGCTTTCATATACGACAGCTCCGAAGAGAGCTCCTC
AAGTCCTTTGGGATTCTGGACTTCGGGTTGTTCCTTGTTGATATCGGGGAGCATTGATAC
AACATCCCGAGCGCGTAGATAGGATATAGCTAAACGCATGACGGAGGCTTTGTCCAGTTG
TTCAACCTCCTCCTTCTTGGCGGGAAGGGCAGCTGTCAGCTCGGAAAAGATTTGCATCTC
CTTGGTGCGTCGACATCGAGCTGCAACGCGAGATTTCTCCTTGCGCTTTTCATTATTCCT
CCGCTTTTGATTAGCTGGCTTTGATGACATCTCGTTTTTTTTAATAAATAGATACTATTA
TGAAACTCACGATATGAACACAATCTTAGAACACTGCCAAGGAGAGTATCATATCGCTTT
TCACGATATCCTGTTAGTTTTATTAAGGTTAGCTTCACTGTTAACTATCACTAATCACAA
TATAGGTCATTATACAATACACTTCACATTTAAATGCACTTTGTTATCGTGAACTTGCAC
AGTA
(4864 bp)

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