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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29927_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		HIF-1alpha_[Helicoverpa_armigera]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:3.51 TPM:3.52
ORF EntryO_SariMG13405_complete:A_SariMG_comp29927_c0_seq4
Sequence
(Nucleotide)
ACCAGGAAGTTAGGAACGGGATGGATGGGGTTAATAAAAATAATCGTGCACCTTTTACCA
AAACACTTTTCTTTTGCTATCATTTTATTATATGAATTTGTCAACTGCAAAACATTTATT
GCCCTTCAGAAAAATAAATAATTATGAAATATAACATTACTACACATTTCATATCGCAAC
AACATACGACGATCCATCAGTTATTAGAATAACAATGCCGATAATTTAAAAATATCTACT
TATTTACGTCTTTTAAGAAAAAAAAAACTTCGAACATCCATATTACAACGATTGCCAAAG
CACACATAAAAATGTACATCTGTCTACGTGCCGACTATCATACAAATACTAAGAAATTGT
TCTTTAGAATGACGTCAACCATTACGAACCTACAACGATCTTTAAAATGTAAAGGCATCG
AAATATTCATTTATAAGAAACAAACATAAACTCGTTCCAATACATGGAAAACTTTTTTTT
TTTTCGTTATATTGGCAGTGGATATTGTTAACGTGACTTATTATTGATTGTCCCGGTAAT
AAATATTTTCGTAAAATGTATAATAATATAATACTTAATAATTACGAACGAACAAGAAAA
ATGATGTCTACTTGATATAAAAAAATGTATTAGACTTAGTTAATAATAAATAGCATTTAT
AGAGTAAACCTTTGAGAACAAGGTATAATAATAAACTATAAATATTGACTCGGTTTCAGC
TAGTCTCTATACAGTTTATGAATGACCCGAATATCGGAGACCCTCGGTAACTACACAAAC
CTAGGAACGATTTAACAACTCATTACAAAACCTATACGATATGCGTACGTTCAACTTAAG
CACTAAAATGAACTTTCGATCACTTGGAAAATTAACAACACTAATCAAAAAAGACGAGTT
TACCCGTCCACCGTCTAAAACTAAATCTGGTCGATCCCCCTCCCTAGGGCAGACCAGGAG
ATTGCAAGTCTGTGCAAGATTAACTACGGCTAACGGATCTTAACCGTATGAATGTTCGTT
TGACGTTTAAATTGCCTTTACAGACTTTAATCTGGCTCGTAGTAACATTTATTGCATCTC
TCAAGACTCTCTGATTAAACTTATCCGCTGCTGGTTTCAATCAGACACTAGTTGATGCGT
GCAGGTTAAATATCACATACGTTAAATGACGACACTTTATTTAATCTAATTCGTATAAAT
ACCGACCAGAATAAAGTTCTGTACAGCACAAAAATAGAAACGATCATCTCGACACTGGAC
GTGATTTATCACAGTTTAGTTCTTTCGGTGAGACCGACGTCTCAGGCCTTAGCTTTCTGA
CGCGGCCGGCATTGTACCATACAAATATACCCCGCGTCCACATCACAACCGCTCACCAGA
AGGTTCATGAGGACGCTCGAAGACGGTTTATTGGAAGTAGGCGCTAACGCTGGCGATGGA
CTACGTTTTGCACGTTTAGCACAAGGTTCTTGTTCTTCCTTCATCACTCTTTTGATACCC
GTATCCCACGCTGAGACGCTTCTGTTCAATATAAGACCTTGATTTGAGTATATGTTCTTT
ACGAGATCCTGTGGGGGTGGTCCCGTCGTCGATGCCGTGAGTAGACGTTGTAAAGCCGGT
GCCGGCGATACATTATGCGTTTCCGAAGGTTGGGGTCGTGCAAGACTAACGCTGTCTGGC
AGAGCGCCCCACATGACAGCTGGCTCCAATACTGGGAGTTCATCGCTCGTCGGTATAAAG
GGTGAGTTTCCGTCATCAATATCGTTATCAGACTTTGTATTATCAAACGCATCTAAAGAT
AATTCTGTTAATAACGACGACTGTTCGCATGACGAATCGTTTTCCTGAGGTTCAGGCGAT
GATAGTAACAACGAATCAGGTGTGAGCGCGTCTACTGGTGATGTACTTGCTAAATCGTCT
CCCAAAAGACTGCAGTAATTATCGCTCAGAATAAATTCGTCAAACATGTCAAAGGGGCTA
TTCTCCAAAGGAATACATGCGTCACCGGCCGTCGGTGCCAAATGTGTCAGATCTTCCGGC
TCGTCTTTAAGCATTGTAAGTCCCTCGTCTTGGGAAAACATGAGAAAGCCTTTGTTCATT
TCTTTCTTTCTTGGTGCGAATAGGAGCTCTGTCACCGGTATTGGTCGCTCGTCCTCTGGA
GGTACGATAGAAACTATAGCACCGTTCGGTGCCGGTTCGACTGGTTTGGAGAGTCGAGGG
GGCGCAGTTGCGACCGATGATACCTTCGGTTTCAAATCAGCATGCTGCAATTGATGTGCC
GCAAACACCTCATCTTTGCACTCGATACCGCTGATGACGTAATTGACGCATACGACGCTG
ACTGGTTTCTGATGTTTGTCGGTGACCACCGTTGCCTGGGTCTGGACCCAAACGTAGCCG
CCGGTTTTCGCCAGAAAACGATACTGTCCTGTTTCGCATTGTCCTTTGGAAAATAATGAT
TTGAACTGTTGAACCATAGAAGCGCTGTCGGCTGCATGATGATAATCGTAGAGAGAATGG
CCGATCAGCTCCTCTGGATCGAATCCAAGTATGTTCCACAAAACTTCATCAACATATGTA
AACTTCATATCCAAGCTGTGTTGCGATAGGAAAGTCTTCGTGTCCAATAGTGTTTCAATG
TTCGATGGATGCGCTATTGGCCTTCCAACAGCCACTAGTGAACCAGTTTTTACTTTCTTA
TCTTCGTCAGATTTCTTGTCTTCATTCGTATTATTATTATTATTATTATTGGTTTCTTTG
TCTTCCGAAGGCATCAGCATGTGACCGGTGACGTGGATCACCTTGTAAGAAGCAGATTTA
AGATGGACACTTCGACCTTTGCTCGTGAGAGTACATTTAAGACGCAGCAATAGATCACGT
CGAGCGCTTCCATTGCTAATACGAAGTGCTTCGCGAATTTCATCATGATCGCACGGATGA
CTGAATTCAAAGACGCTTTGGCCCATTATCTCCATCTGTGACACGCCGAGGTGATCGGCA
ATATTCTCGCTGCAGTAGACGATGTCACCCTGCTGTGACATTACAAAGACGAAACCATCT
AATGCTTTCATATACGACAGCTCCGAAGAGAGCTCCTCAAGTCCTTTGGGATTCTGGACT
TCGGGTTGTTCCTTGTTGATATCGGGGAGCATTGATACAACATCCCGAGCGCGTAGATAG
GATATAGCTAAACGCATGACGGAGGCTTTGTCCAGTTGTTCAACCTCCTCCTTCTTGGCG
GGAAGGGCAGCTGTCAGCTCGGAAAAGATTTGCATCTCCTTGGTGCGTCGACATCGAGCT
GCAACGCGAGATTTCTCCTTGCGCTTTTCATTATTCCTCCGCTTTTGATTAGCTGGCTTT
GATGACATCTCGTTTTTTTTAATAAATAGATACTATTATGAAACTCACGATATGAACACA
ATCTTAGAACACTGCCAAGGAGAGTATCATATCGCTTTTCACGATATCCTGTTAGTTTTA
TTAAGGTTAGCTTCACTGTTAACTATCACTAATCACAATATAGGTCATTATACAATACAC
TTCACATTTAAATGCACTTTGTTATCGTGAACTTGCACAGTA
(3582 bp)

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