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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29926_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		TRAF3_[Bombyx_mori]
Ontology
GO:0001817 P regulation of cytokine production
GO:0002224 P toll-like receptor signaling pathway
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0008063 P Toll signaling pathway
GO:0008270 F zinc ion binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0030162 P regulation of proteolysis
GO:0031625 F ubiquitin protein ligase binding
GO:0031996 F thioesterase binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032480 P negative regulation of type I interferon production
GO:0032648 P regulation of interferon-beta production
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0035631 C CD40 receptor complex
GO:0035666 P TRIF-dependent toll-like receptor signaling pathway
GO:0042981 P regulation of apoptotic process
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
GO:0050688 P regulation of defense response to virus
Transcript
Level		FPKM:23.17 TPM:23.24
ORF EntryO_SariMG13393_complete:A_SariMG_comp29926_c0_seq3
Sequence
(Nucleotide)
TAATTTCATTTATATAAGGCTATATTTATGTATATATTTTTGTTAAAAATCAGTCAAATC
AAATACATAGGAAAGTGATTTTTTAAAATATGACCGTTTTAAACATATTCTATGAGCGGT
TAATTTAAAAAATACAATTAATAATATTAGTTGTAAGAAGTGTCAGTGCTCCGTGGAGAA
GATCGGCGGGAAGATGAGCCTCATGAGGAAGAGTATGGACGGACTGGACATGTTAGGGAG
TAAGAATGCTAAAGACAGCCCGTGTTACTTCTGCAATGAGTTCTTTGAGATGGGACAGTT
ACAGAACCATTTAAAACAATGCGGCAGTATACTGGAACAGTGCCCACTGAGGTGCGGGGC
CTGGATACAGAGAAAACACAAAGAAACTCATGTCAAAGATTGTCCACAGATGGAAAAGAC
GCGTAACGCGACGTCACCGAGTCACGCCAGCATGCCGGCGCCGACGCCGCCGATGGTCAC
CGTCACCAACCACACGTGGACTCCTCGTCCAATACCAATGGAGGATTGTCTCTCTTATTT
AGAGAAAGAAGTGGCTAATATCAAATTAGTAGTGACAGAGGAGTCAAGTCACCGTGATAT
CCAGGCAACAGAACTAGAAACTCTTCGCTCTAAGTTAGTCTTAGTTGAAGAACGAAGTCA
GCATTTTTTGTCGACTTTGGTTTCGCTCAGAGCTGCGGTCGACGACGAAGCGAGTAGATC
GGCCAACTGGGCAGCGCAGTTTAAGCACGACCTAGCAAATGTCCAGCTTGCTTTACAGGA
GCTGCAAAGTCAGCAGTTGTCAACTGTGATGCGGCTCGAAAGTGCAGTCAGCAGTCTCGT
GCATGAACAGCACGAGAGAGAGCTCCTGGAGCAAGCGCTTACCCAGCATGACAACAGAAT
CCGCACGGTAAATAGACTTGAGGAAGTGATAACATATCTAAAGCAGACTGTAGAAGAGGA
GAGAGAGCGGAATGCTGAAAATCGAGCCGCTCTGGAGGCGGAACTGCTAGAAGCTCGTAG
ATCTTCGGAACAGTTAGCACAGCTGTCGGTATTACGCGCAGAACTGCAGAACACAGAAGC
AGAAAGACCATCGATAGACAGATTGGCTGTGCTGGAAGTAGCTACTGCTAACGCTAGGGC
TGAAGCTTCAGAGCAATCGTCCCGGATGGATATCGTGATGCGAGACCTCAGGGCGCTCAC
TAAATCTTACCACAAATTGCGGACAGAGCTCGCAGACTTCCAAACGAGAGTCATTTTCGA
CCAACACGGGACTGGCAGCGACGATGGCCATTTTATATGGAGAATAGATAACTTCACAGC
TCGTATGAAGGAAGCTAAAGACAACGACGCTGTCCTCAGCAGTCCACTCTTCCGTACCAG
TAAATACGGTTATACGCTCAAGGCCGAAGTGAACTTAAACGGTATCGGTAAATGGAAGGG
CAGGCACATTACTTCGACGGTGAGGCTGGTCGGTGGTCCTTATGACCCCTTGTTGGAGTG
GCCTTGCGACCTCTCAATTAACATCGTGTTGAAGGACCAGGCGACTAATCGACGACAGGC
GATGGACATTGTAAAATCTCTGCAGTTACGTCGAAAGTCGTCGTCGAAACGTCACGATTA
CGACGAAGGCGGAGAAGATGAAAAGACCAAGTCAAACGAGGCCCTCGACAAATCTGTACT
CCAGATGAAGCGGCAATACATATTCATACCGCACACAAGTCTGGACAAGTTCGAGTATAT
AAAAAACGATGTCATGTTCGTCGAGTTTATTGTCAATCAGTGACTCGTCCGACGAATCAT
CGCGACCACATTGACACGTGCCCAACAGATACATAGTTCAGAAGAATAAAAAAACTAGGC
AGCCATGTGTACTGCCGACAGAGGTGAAAACTTGAAACTAAAAAAACCGTTTTTTTAATG
CTTAAATTTGTTAATTGCAGTTATTAAGACTTGTTGACAAGACTATAACCTAACATTTGG
TTGTTGCTCCGAGCAATAATTATGTTCGTTTTCATGTAGTTACTGCTGCTGCCTAAGTAA
AAGTTATACTTTATTCTCTGAGCGCTAGGCGCTTAAACGCCATCTTGCACTAAATAATTT
TTGGGAGTTGCTTGTATTTTTTTTTACTTGAATTCTTTCTTTCATATAGAACAGTCCATG
AACAATTATGACCGTTGATAGGTCTATAGACAGTCGGTATCATGTCAGCCCACATATACC
GCGGCTAAAGCATCTAGATAGCCCTCTGCTACTGTTTTTTCTCAAGTGTATAGTGGTCGC
TATTCGCTCTATAAGCAAATTGCTGCCTCTTACGCCCCGCTGCGTTCACCTTTTTCATCT
TAACTCTAAATAAATGGTCACCACATATTTCTGGTCTACATAGGTCGATGTGGAGTATCA
TTGCGGGCCCCACTTTTATGGATACCATGATAGTTAACATATTTTTATGAGTTGTCAAAT
GCGAATTCCCTATACATTTTGTGTGGAAATAAAAACCTATGTATTCATTTTTAAAAACTT
AATTCACTAACTATATACACACTCAAATTTGGACCAAAAATGTTTGAGACATCGGGAGCC
GTACAAACACCGACCGAGGACCGCATTCGGCCCGCGGACCGCAGTTTGACGATCACTGCT
CTAAATACACTTAACCACCGATTTTGATTTTTTTTTTTTAATATGTATCAATTTTCATAA
TATAACTTTTATGTATGTTACTAAAACTGTACATGTATTTATTTAGTTAAATAAATA
(2757 bp)

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