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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29904_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_histone-binding_protein_Caf1_[Papilio_xuthus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016581 C NuRD complex
GO:0030308 P negative regulation of cell growth
GO:0035098 C ESC/E(Z) complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048545 P response to steroid hormone
GO:0070370 P cellular heat acclimation
Transcript
Level		FPKM:6.09 TPM:6.11
ORF EntryO_SariMG13257_complete:A_SariMG_comp29904_c0_seq1
Sequence
(Nucleotide)
AGATTTTGTTTGGCGCCTTTACGGGGCCGGTCAGAAAAGTGGTATTAGGACGATAATTTT
TCATTTGTGCTTTTCGTATATTTATTAGCAGACCATAAAATGGGTGATAAAGGCGACGGA
GAAACATTCGACGACGCGGTAGAAGAACGAGTAATCAATGAAGAGTATAAAATATGGAAA
AAGAATACTCCATTCTTGTACGATTTGGTGATGACACACGCCCTGGAATGGCCCTCGCTT
ACTGCTCAGTGGCTCCCTGACGTTACCAGGCCTGAAGGAAAAGACTACTCGGTTCACAGG
TTGATACTCGGAACTCACACTTCAGATGAACAAAATCACCTATTAATTGCTAGTGTACAA
CTGCCAAATGAAGATGCTCAATTTGATGCAAGTCATTATGACAATGATAAGGGAGAGTTT
GGTGGTTTTGGTTCCGTATCTGGAAAAATAGACATTGAGATAAAAATTAATCATGAAGGT
GAAGTGAACAGGGCTCGCTACATGCCCCAGAATCCGTGCGTCATCGCAACGAAGACCCCT
TCATCAGATGTTCTCGTGTTTGATTATACGAAGCATCCATCTAAGCCAGAACCATCCGGA
GAATGTCATCCTGATCTTCGGTTGCGTGGTCACCAAAAAGAAGGCTATGGTTTATCCTGG
AATCCCAACCTGAATGGATACCTTCTATCAGCAAGTGACGACCATACGATCTGTCTGTGG
GATATCAACGCAACACCTAAGGAAGGTCGTGTTATTGAGGCCAAGTCCGTGTTCACCGGT
CACACGGCTGTCGTGGAAGATGTCGCGTGGCACTTGTTGCACGAATCACTCTTCGGTTCA
GTTGCTGATGATCAGAAACTGATGATTTGGGACACCAGGTGTAACAACACGTCAAAACCA
TCTCACACAGTCGACGCGCACACCGCTGAAGTAACTGTCTTAGCTTCAATCCATATTCTG
AATTCATATTGGCCACTGGGAGTGCAGATAAAACTGTCGCGCTTTGGGATCTGCGTAACC
TGAAACTGAAACTTCACTCGTTCGAATCTCATAAAGATGAAATATTCCAAGTGCAGTGGT
CGCCTCACAATGAAACCATTCTCGCGAGCAGCGGCACTGACAGAAGACTTCACGTATGGG
ATCTTTCGAAGATAGGTGAAGAACAAACGGCAGAAGACGCCGAGGACGGTCCTCCAGAAC
TGTTGTTCATACACGGCGGACATACTGCTAAAATATCAGACTTCTCATGGAACCCGAACG
AACCTTGGGTCATCTGTTCCGTATCTGAAGATAATATCATGCAGGTATGGCAGATGGCGG
AGAATATATACAACGACGAAGAGCCAGAGACGCCCGCCTCGGAACTAGAGTCCGGAGTGA
ATGTGAACCACGGCTAGCGGTCGTCCCTCTCGCCCCTGCACCTCGCCCCGCACTCTCGTC
CCGTGACCTCGCCCCCTACTCCGCCGCGACCGTCTCAACCTAACTACGTGAAAACGATAA
CAGCTCTCGCATTTAGAGTTGTGAAATTTGGATCTCGACATTTTTGAAACATTCTTTTTT
TATTACTGTTTTTAATTAGTTCGAAGAGACCGGGGACTTTTGATTCCGTAATTAACACTA
AAACTACCGATATTTCAAATATCGCACTTTCACTATGAACGTGATCTAATATCGCGATGA
AAGTTTAAAAAAAAAATCTGCTCCTTTGTGTGGTTTATTCGTCAGTATTTTTTTATGGAA
TCATTAAAAAAATATATTTGAACCAATTTTTAAACAATAATTAATTTAATGTAGCTTATA
GTGTAATTGTTTCATAACTTAATATCTCGATTTATGATTTGAGTCAGTTTCGTTCTGAAA
GTGCGATATGTCTAGTGGTCTACGGGTCAAATGATCCGAGTTTAATTATTTTTTTATTTT
AAAATGTTTTAGAGGAATTCCTTAATAAAAACAATAATAAGAGACGAGTCGATATTGAAA
AACACTTTTAACATATTTTTCAATAAAAGTAGTCCGTCGCGGAACGTTCAGTGTTAAGTT
AGATATGCGTTAGTAAAATATAGTAAGCTTATTCGTTTGTAAGCTATTTCCCCACAAGAT
AAAACTCTATTGATATTTTCTGTTTTAATTATTTTTAAACTTGAAAGCCAGTCCATTTTC
CAGGTTTAACGTCTTTAGTTCTGGCATCTTCATCTTTTTTTTTACTTAATATCAAATTAT
GTGTTTACAAAAAAGATGAACCTTGTAACACGATTAACGGGCGGTTTCAATATTCGGTCT
CGATCTATTTTTATTTTTACCTATTGAAATCAAAAAAAGGAACCCTGTTTTTCTCGTAGT
TTCAGATCAGTCAGAAAAACTTTTATTTTTGGTATGATCTCTAATTTAAATTGTATGAAG
TTTACAGAACCTCAAAGAATTTATTTATTTATTTTTCTAACTTCGTGTTGTAGAACTCGG
GAGTTTGTAATGATGTATAAAAATCATTTAGTTCAAAGGGACTGGCTTCAATTTCAATAT
AATAATAACAAACAGACTAAGTAATTTACTTTACTATAAATTATTTACATTATTTCATAA
TCCAAGTTACCGCTCTTTTACATTGATACGTACAGATAAGATATGGTTCATAGACAACGT
CAAGCACCATTAAAAAAAAAACAAGATATAATTTTTTTACTTTTTTCTTCTAATTACTCC
AACCCTTGCTATTAGTTTTTTTTTGTTGTTGTAATATTTCATAATTAAATTATCTTTCAA
TAATAAAAAAACATACCAGTAACAATATAGATTTTTAATAATTATTTGTTCAGGTTACAA
TGAGCAATTTCAAAATATTCTCGTCTCTTCATATTATAATTGGGACCTAATGATGGTGTT
TGTGGCTGGCATTTAGGTAATTAAAAAAATAAAAACAATTTCTTACATGTACAATATATA
ATTTTTAATGTATCACACAATTGTCGTAAACCTGTTGGAGATGTGACAAGCACGTTTTAG
AGATGTGAAGAAAGTAATTTCGTACATAGATATGTAAGGTTATGAGAATATCATAAGTTC
AGGTAATGTGAGTTGTATGAATGTTTAAATTGAGTTCTTGATAGGTGACACGACTGACCT
TTGGGTATTTTATTTTGTAATGGAATGTAATTTTGAGTAAAAAAAAATTCGTACGATTAA
AACTTATTCTAAGAAAAATTATT
(3203 bp)

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