SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29901_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-14-like_[Bombyx_mori]
Ontology
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042995 C cell projection
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0097352 P autophagosome maturation
Transcript
Level		FPKM:0.36 TPM:0.36
ORF EntryO_SariMG13248_5prime_partial:A_SariMG_comp29901_c0_seq5
Sequence
(Nucleotide)
CGGAGTTTGCATATAAATTTGATAATCAAATTTATATTATTTACATTGGAATTTTGTGTA
CTTCAATAGCTGTACTATATTTCTATAAATTTCACTTTGTTACTATAGCATTTAGTTATC
TTTTGGGGTGTCTAGCCTGTTATTGTGGCCTAAATTCATCACTTTTATATAATTATGTAG
ATAAATTAAAGTGCCATTTATTCGGTGATATTAGAGAAGGTGTACAAACAAAACCGATCA
AATGCTGTTTAGCATGTGGGTCTAAAGACTGCACAAGGCATGATACAAGCACAAATGCAG
AGCCCTGGGTGGGCTTACAAATACACAAGCAACTTGATCAGGCCATAGAGGATTTCTACA
ATACAATTTTGGATCATTTTATAAATACGTGGTACAGCAAGGTCACCTTACGACCATTCT
TTGTAGACGAGTTGAGCCATCAACTGCGCTATTCGTCATCTTGTCTTTTACAACGGGCAA
TAAAGATAAACTACTCGAGGTTTTTAACGGAGCGTCTGGTACCATGCGCACTACGACATT
ACACGTTGTGTTGCGTTGGACCGACGGTGCGTTGGGGGGAGGGGGAGGGCCAGTTCACAT
TTCGCGTTCACCCGGCTGCCGCCAACCGTACTGCCGAGCTCGACTACCTCCGCTGCCTTA
CAAACACTCTCATGCCTTACCTCCTCAAGAGCCAGGAGCAGAACAACTCAATATTCCGCG
TGCTCATCAGAGAAATTTTCGCGGGTTGGGTTCTTTTGTCCTTGACTGATGTGTTAGCGG
ACCCTTATATACTAAATACCCTTATCATATTGGCGACTGGAGACGAAACTATGGCCGAGT
TACCCACTACGCCTAACTACAAGGTAGAATTCCTCGAGACGTTCGTCCGGCAGTCGGACT
CCCTCTACATAGAGAGATGCAAGCTGCTCAAGATAGACCTGGAGACGGTGCTGAACGACC
AGGATTACTTCTACGCGTTCATGCAGTACATGAAGAACACAAGTCATATACAACTATTGC
AGTTCTACCAAGATATCAAATCGTTTCAAATGAAAATATTGAACCCGGAACTGAGTGATA
CAGAGAAGGCAGCTCTTCACAAGAAAGCGTCAGCTCTGTACTCGGTGTATATATCCGAGG
AAAGCATGAGTCGAGTACAGCTCGAGCCGGCTATAGCTGGCGAGCTTTACGAGCTGTTGC
AAAGCACCGACAGTATTAAAAGACTACAAACAAGCAGAGCTCTATACCAAGCAGCAAGGC
AATCGCACAGCGTTTTAGAAAAAATTATGTTACCTAGATTTCTGCACAGCGAAGAATTTT
ACAAATTAATGATCGGCAGTAGAGTACCCACCGGCTACCAGAAGAATATGACAAGGAAGC
CACACGAAAGACTCCTGAATACAGCAATAAGGCTGGGCAACAAACTGAAAGGCGCCCTGA
AACCGCAAAGTATAGACGGGCAGGTGTTGGACTGTTTCACCAACACGGAGGAGTCGGAGA
GCGACGGGGCCGACAACGTGGACATCCTCAAGTACCTGGACAGCATCGCAGCCGAGGACT
CGCTGAGGGGGAACGATCTCAGTAATTACAAAGTGGTCCTGACTAATGTCGATATAAGAT
TGCAAGCTCCCCCCCGGCGCGGCACGGTGCGCGTGTTCACGATCGCCGTACATCGGCTGG
AGACAGCCGGGGCGGCTTCCTTCTGGACTGTGGAACGCAGCGAGCACGACTTCCATCTCC
TCAGGAGCAAGCTGCACGAGTTCCACGGAGACAGCTTGCTGCTGGACTTGCCTCTTCCCT
CTAGGAGAGGTTACTGCAGAAGAGTCTGCTCCGGACCAGCGAACTCCTGCGGATATTCCT
CACGGAGGACGGAGACTTCGCGATGGTGGTGCAGGCTTCGACCCTGAACGCGACCAGCAC
CGACCTGGTCAACATCTACCAGGCCGTCACGCACAAGCTGAGGAAGGAGAAGGGGCAACA
CCTGGACACGTTCCTCGGGAACTTGCTCGTCTCATCCGATATGGAACGTTACCAGGCATT
AAAGCAAGGCACGACTAGAGAAGTTGAGGAAGCTCAGGAAATAAGCGAAGAAGCCGAGGA
AGAACTGCTCGTCTCGAGGCGGCAAGGACGTGCGCGCGACATACACGACACGACGTTCGA
GAACAATCTCGGAATCGAACCCGCTCTCGAGCTCTTGCCGCAGCAGGGTTATCAGACCGT
CCTCGTCGGTTTCACTCACTGTTTCATGTATTTATTGAAACGGGTTATAGGAGCACGTGG
TTTACTCTCTGCGTTCTGCGGTACTGTGTTAGCTTACGGGAAGGAAACATTCGATCATCT
CTTCAATATTTACTTGAATACGGTACTCAGTAACTTACTCTCTGAGAGGAGACTCGCCCA
CCTGATCAGACTCGGACACGGGTTGTTGTTCGGGAAGAGATCGTCCCAGCCCCGGTCGGA
TCCGGCGAAGCAACGCGATCGGGCTCGCATCCAGCTGCGGGATGCGGTCCCGCAGTGCGC
GCGGCTCGCCGCCGGCCCGGGGTTGGTGCGAGCGCTTAACAACGCCTTCGATATCATACA
AAAACCTGAATTGAACAAACAGTTAGTCTACAATCTACTGGATTTGTGCATTGCGGAACT
TTTCCCAGAATTAAAAAGCGCTGAAACATTCCCTTCGAAAGTACCAAGAACTTGAGAAAA
TTATTACTATTATTGAAACATAATTTTGCAATATGATAAGGTCAAGTTTAGATTACATGC
AGTCTGATGAGATTTCATATTTTGTTCATGGTCAGTACAGTCACCTTATAAATAGTCTAA
ATATGAAATATCATGGCGCAGAAGCAAATGGTTTTTGGTAATTTTTAAAAATCCATTATT
TCTCCGGTTTGTTTTTAATTCACCTTGTCGCAATTATTCATCTATAATTTGAGGAAAAAA
CTAACTATGTATTTCCAAAA
(2960 bp)

- SilkBase 1999-2023 -