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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29883_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-rRNA_processing_protein_FTSJ3_[Papilio_polytes]
Ontology
GO:0000453 P enzyme-directed rRNA 2'-O-methylation
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001510 P RNA methylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0008650 F rRNA (uridine-2'-O-)-methyltransferase activity
GO:0016435 F rRNA (guanine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:3.95 TPM:3.97
ORF EntryO_SariMG13183_internal:A_SariMG_comp29883_c0_seq1
Sequence
(Nucleotide)
TCACTGAAGATATCACAACAGAAAAGTGCAAAACATCAATTAAGAAAGAAATTAAAACAT
GGAAAGCTGATGTTGTTTTACATGACGGGGCACCAAATGTTGGTCTTAACTGGATCCATG
ATGCTTATCAACAAGCGTGTCTTACCCTTAGTGCATTAAAACTCGCAACAAATTTTCTTA
GAGATGGTGGTTGGTTTGTAACAAAAGTATTCCGGTCAAAAGACTACCATGCTCTACTTT
GGGTCCTAAAACAATTCTTCAAGAAAGTGCATGCTACAAAGCCACAGGCCTCACGTAATG
AGTCATCAGAAATTTTTGTTGTATGCCAAGGGTATATTGCTCCAGATTCTATAGATCCGA
AATTTCTTGATCCTAAACATGTGTTTGAAGAATTGGATATTGTAAAGAAACAACATGCAA
ATATTTTACATCCTGAAAAACAGAAGAAAGCCAAGGCCGAAGGTTACCAAGAAAATGATT
ATACAACACATCACAAAGTCATGTTATCAGACTTCTTGGACCAGGATGATCCTATAGATT
TATTGCAAGGATGTTCTGAGATTGTATTTAATGACAAAACCATTGAAGATCACCCTAAAT
CTACTACAGAAATAAAGGAATGTTGCAAAGATATTAAAGTATTGGGCAGAAAGGATTTAA
AGTCACTTTTAAATTGGTTAAAACAGATGAAGGAATTTAAGTCGTCTCAGATCCAAAAAG
TTGATGAGAAATCAAAAGATAGTGTTCAAACTGATAACGAAGGTGAAGAAAAGGAAGAAC
AAGATGAAGAGGAAGTTGTTGATGCAGAAATAGCTGAATTACAGAGTGATGAGAGACGTC
AGCTGAAGCGTAAGAGAAAACAAATAAATAAACAAAGGCAAAAGTTAGCTGAGAAGATGA
ATCTAAAAATGGTACTTAAAGGTGATGATGGTCCTATAATGGAGAACCACGACATGTTTA
AGCTTTCCGACATAAAGAATGCTGAGGAATTAGCTCGTGTTATCGACCAGCAACCAGATA
TTGTGGCTGGAGTCAGTGATGATTCAGATGACGAGTTGAAATTAAAACCTAAATATGTGA
AGTATGATGTGGAATCATCAAAACTAGATTCTTCCGGCCTCTATTATAAAGATACAGACA
GTGAATTAGAAATGGAATCAGATTCTGATAATGAGAAAGAAAAAGAATCCTTAGCCTTTT
CGGATTCAGAGAATGAATCTAAAAAAATTGACAAACTCACAAAACTGAACACACTCAGAA
ATACCCAAAATACTGTTTTAAAAAGTAAACTCATAATACCTAAAAATAACCCATTACTTA
CTGACTTGGACAACACTGACCCCGTGTCCAAACGCTCTATGAGGGCACAGCTTTGGTTCC
AAAAAGACACTTTCAAAGATATCGACGAGGACGACGATGAAGCCGTTGACTTAGATAAAA
TGGCTGAGACATACAAGGAAAAAGGCAAGAAAGTTATAGACAATGAAAAATCGAAGTTGA
GTGATATTGACTTGAAAACAAAAGCACCTGAGACTTCTGCGAGTTCCGATGATGATTCCT
CTGATAGTGACTATGACGTGGAAGATAACATAAGAGAAAGCGCGGGTAATGCTCAATCCA
GCAGCAAAAAAAGATGGTTGAAGTTGTTCCCCAAGATGCG
(1660 bp)

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