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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29825_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ribosome_biogenesis_protein_BOP1_homolog_[Plutella_xylostella]
Ontology
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
Transcript
Level		FPKM:5.51 TPM:5.53
ORF EntryO_SariMG12955_3prime_partial:A_SariMG_comp29825_c0_seq1
Sequence
(Nucleotide)
ACATCATTAATTGAGCCCATCATTACTAGACCCTAACTATAACCTATAACACATGTTTTT
ATTATAAGAAGAGTTTTTATTAAAAATGCCTCCATTTAGAACTGGATTATTAAAAAGGAA
AAATAAATCGTATGAATCAATAAAAAGCTCTTCGAAAGATGAGTTAGATAGCGAAGATTT
AATAAGGGGTGAGCTAAATGTTGAAGGCGACGCTACTGACTCCGAGCACGAGGATGAACC
AGAAGCCACTTCTGACCAAGAACAAGATGAGGTGCTGTTTGATGATACTGCTGACTCTAC
TCTAGGGGAAGATGAGCAAGTTGAATATGCAACAGATGAATCATCGGAACTGACAGATTC
AGAAACTGATTATGAAACAGAAGATGATGAGGATGTCAACAAAGGTAGCAGCGATGAAAG
TGTTGATAGCGGTGCAGAGTCAGGTTCTGGACCTACAAAGTCATCCTCTAGTGCTAGTCA
AATTGAAACATCTAAGCAGAATAAACAAAAGCAAAAGAATTCTAAAACAAAAAGAGAACA
ATTGACAAAAAAAACTGAAGACAATAAAAATAGTATAGATCGACTAACAAACAGCATCCA
GCAGACTAGTGTCACACAACCAGTTGCCCAGAAAGATGAATATGAGTCAGGAGACACGTC
TGACGAGGAGGAGCGGCGCAACACGGTGGGCGAAGTTCCCATGTGGTGGTACAATGAGTA
CTCACATGTTGGGTATGATCTCGACGGACGACGTATCATGAAGCCACCGCAGCGAGATCA
CATTGATGAGTTTCTTAGAAAATGTGAAGATCCTGAGTTTTGGCGAACAGTACGTGACCC
TGCGACCGGTCAGGATGTGGTACTCAGTAAAGAGGATTTACAACTCATACAGAGGCTGAG
AGAGGGACACGTACCAAATCCTGAACATAATGAATATGAGCCGTGGATAGAATGGTTCAC
ACGGGAAGTGATGCAAACACCCATCCGTGCATTCCCGGAGCACAAGCGCTCCTTCCTGCC
CTCGCGCTCGGAACAGATGCAAATCAGCAGGATCGTGCACGCGCTCAAGATGGGCTGGAC
CAAGACAAGGAAACAGCTCGCACAGGAGAGGAGGAAGAGGAAGGAAAGAAAATTCTATAA
TCTCTGGGGATCAACCAACTCTGAGGAGGAAGAGAAGCAGCGCGGCATCCACAAGCACAT
CCCCGCCCCGCGCCGCCCTCTGCCCTCACACGCGGAGAGTTACAACCCTCCCCCGGAGTA
TCTGCTCGACGCCAAGGAGATGAAGGAGTGGAACAAGTTGTCAGAGACGCCATGGAAGCG
CAAGTACACGTTCCTGCCGAGCCAGCACCGGTCCCTGCGGGAGGTGCCCGCCTACGAGCG
GTTCACCCGCGAGCGTTTCCTGCGCTGCCTCGACCTGTACCTCGCACCCCGCGCCATCAA
GATGCGGCTCACCATCACCCCGGAGCAACTGGTGCCCAAGCTGCCCTCCCCCCGGGACCT
GCAGCCCTTCCCGACGGCGGAGGCGCTCTGCCTGCGCGGGCACTCCTCGCTCGTGCGCTC
CGTCGACTTCGACCCCTCCGGACAGTACATCGTGAGCGGCGCCGACGACGGACTCCTCAA
AGTTTGGGAGACGAGCAGCGGCCGGTGCCTGCGCACCATCCCCTGCGGGGACAGCGTCAC
GCGCGTCGCCTGGATCCCGGTGCAGGGGCTCAGCCTGGTGGCGGCGGCGGCCGGCGTGAC
GCTGCTGCTGCTGAACCCCGGCCAGGACATCGGGGCGCACCGCGTCGCCGAGCAGACCGA
CGCGCTGCTGGAGGAGCCCCCGCCGCAACACGACCTCGAAATGGACGAGCGCACGCGCGC
CTGTGTGCAGTGGGAGCGCGTGGCGCCGGAGCAGTGGGCGCGCGGCGTGCGGCTCGCGGT
CACGCACTTCCGCGCCGTGGCACACGTGGCGTGGCACGCGCGCGGCGACTACGTGTGCGT
GACGGTGCGCGAAGGGGCGTCCCGCTCCGTGCTGGTGCACCAGGTGTCGCGGCGCCGCTC
GCAGCTGCCGTTCACACGCGCCAAGGGGCTCGTGCAGTGCGCCCTGTTCCACCCGACGCG
GCCGCTGCTCGCCGTCGCGACGCAGCGCGCAGTGCGGCTCTACGACCTCGTCAGCCAGCA
GCTCGTGCGGAAACTGCTCACCGGAGCGCAGTGGATCAGCACGATGGCGATGCACCCCGC
CGGGGACAACCTGCTCGTCGCCTCCTACGACAGAAAGTGCATCTGGTTCGACCTGGAGCT
GTCCTCGAAGCCGTACCAGACGCTGCGGGTGCACGGGGGCGCGGTGCGGGCCCTCGCGTT
CCACCGACGGTACCCGCTGTTTGCCTCCGCCGGGGACGACCACAACCTCGTCGTCTACCA
CGGGATGGTCTACAACGACCTACTGCAGAACCCGCTGCTGGTGCCGCTGAAGCAGCTGCG
CGGTCCGGAGCCCCGCGACGAGCTCTGCGTGCTGGACGTGCGGTTCCACCCCACGCAGCC
CTGGCTCCTCGCCGCCGGCGCCGACGCCACCATCAGGCTCTACACATGAACCCTATACCC
TATACATATAAATATATATTTACATTACATAAAAAA
(2616 bp)

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