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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29821_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_calsyntenin-1_[Papilio_xuthus]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:21.55 TPM:21.61
ORF EntryO_SariMG12946_complete:A_SariMG_comp29821_c0_seq1
Sequence
(Nucleotide)
TTTTTTTCATTTTAAACCAACTTTATTTTTAGCTAAAATATAATAATTCATACATCAATG
AAGTTCCTTAGTAATAAATTTAATCATACAAAAAGGAAAAAAATAATATAAATGAATAAT
AATAAAAATGTATAATATAACATAATTATGCGAGTTTGTATGTATATAGCTACCGCATAG
TACTTATAGTTTAAGATAGCCCAATACAGACAGGCTGGGCTATAGAATGAAACGCCTACA
TTTGTGCTAGGTCCTATATAATAGCTGCTGTGTTCACTCATCACGTTCAGATCTTAAACA
TTAACATGGGAAATGTTCATCGGACGGTTTTCTAATGGAAATACATAAAACACAACGTTT
TTTTTAACTTAATAAAAATAACCACACAGAACGAAACGCGCCTTTGGGAATTTATAACAA
GTTCGTTATACGAGCACTTAATTAATTTCGAAATAATATAATTTTGCATAAAATGGCACT
AATATAACACTTTTATAATAAAACACAAAAAATAGGAAAAACTTTAAAGAGTTTTTTTAT
AAAGCTTTCCCGAAGGCGCGATTCTTTATAATCTATTCGTAATATTATTCTGACAGATAC
AAATAACCTCAAAACATAGACGAATAAAAACTGACAACTTCAAAATTGACACAACAAACC
ATTAATATTAGACATAAGTTAGAAAAAATTGACGTCAAAAAAAATCGATATGACCTTGAA
CTGTCAGTAGATTTGACATTTCGAATAGATTATGTATGGAGCACAAAAAAAAGACAGCTG
CTCTCGTGAAAGAAACAAATAAGTAATACGAACAGTCGAGACACACGAATGATTATGTCG
AGAATTGCTTTACGGTTGACACGACACTATTCGTTCCGGTTAACTACACACTAATATGGC
AAAAGTATTATTGATATGCTTCTCGTGTATTTGTGAGACGGCGACACACGGCGGCGCAGT
GACGTCACGTGACGTCAGGTGCCGTGCGCGACTGTGTGTCGCCGGGTGCACGTGTCCTGT
GCGACATTCAACAGCGGATAGAAAGAAACAGTTCAATCCTTAACTAGAGTAACGTCCTAT
ACGTCGCGACTCCTCTCATTAGCCATTCCTTAACATCTAATTGTTAGTAAAAATCCCTTA
ACACATTCCAAATATATATATATATAATTATATATAGTATATAGTAGCTGATTCTAAACA
GATATATGTATATGTGTATAATATCGTACAACTATTACTTTATTTCAAATAACTCTGTGC
CTAATATACATTTAAGCCGATCTCTTCGTGAAGCTCGTAAAAGGTTTATAAAGTTATGGA
CATTTTTTTTTCTTGTCGCGTGACAAATATATTATTATTACTAATAAGAGTGATTAAAAA
GCGGTCTTTGTACTAAAAATAAAATACGTCTGTGACGTTGTACTCGCATCTCGTGTACTA
CAAAATGGCGGGTGAATCCAATATGGCGTCTGTACATAACCTCTAAATGCGCAAATGGTT
GTTATACCTAAATATGTTAATATACCTAGATGCCACAATTGATAAATCTCAATGAAACTA
TATCGAATTAGTGAAGCATATACATACATACATACATATGTTGATTAATATATAATTAAT
AGTGTGTATCTGATAGCTTAATTCTAAAAATCTTACAATCGATTTCATACGAAATTACAA
CGACTACGGATCAATACATACATTTTACATTTATATTATTTTATTAATAATAATGTGTAT
TATTATTACACTAATTAAGATATTAGAAAGGAATAATAGAAATGATATATAATCCACCGG
AGCGACAACTAACGGAATCGGAACGAGCAGCAATGTCACTTCTAGGATGAAGCTAAGCGA
GGAGTTTTATTTCAATCATTTACGTATAAATTTGATATGAACTTTTTAATTTCGAAGACC
TTAACCGAGACGATAAACTACAGACAGACAAACGTAATTATTCACTATGATATATGTATA
TAATATAAAGTATTATATAATCACAATTTATCATAGAACATTGTGCCCCGCGTCTGTGTG
TTTGTGCTGAAGCTTTTATTATAAACTTATAGCTAAAGTACTTTATAAAGATGGTCAGGA
ATTACGATTCCGAACGGGAAGAGGGGAGAGGAGTGAGGGATGATTTTGAAATCAATTCCA
TTGAAAATGTACTTTCGCTTCCGAATGGTTACGTTACGATATTGTACCCACAGAAATTTG
TATGAACAAAACAAAATAGCTATATTAAAATCGATTTGTAATTATACTGGCCGATGTGTG
ATATGATTAAACGATAAATCTCGTATTAAATAGGCCAGTTTAAGTAGTATTTTAAACCTA
TAAAGAAAACAGTATACGCCACTAGTGTTGCTAGCGACATAACAACATAATTACATTATG
CACTCGCTTCGTATATTCAGATATAATATAACTGAATCCTAATTTCTTTCGTTCACAAGG
TTTGTACCGGGCAATAATTTAAAACGAATAAAAATAATCGGAATGTGTGATACGTATACG
ATTAATCGTTTCCCTTATAGTATAATCTTTCTCGATATCGTAACTGTAACGGTGGTAGAA
AGGGAACGGAGATGGGAGAGCGAGTGGAGTGGGAGTGGGGTATGTGGGGGGCGTGTGTTA
AGTACTGTCCGCTGTGTGCGTGCACGTGCATGCGTGCGTGCGTACGTGCGTGTTTACATC
GTGCTGTTGTCCCACTCGAGCTGGCTGATGTTCCTGTACTTGTGCTGCTTGCCCGGCATC
ACTTCGTCGTCGTCATCGTCGGAGTCGTGCCGGTCGGAGTCCGAGTCGGAGCAGGACTCG
CCCTCGGAACTCTCCGCTACGTTCTCATGCGTGCCGCATGTCGGTGCGGTCTCATCCATG
GGGTTGACGGTGATGGTGAGCGCGGAGTCGTCCCAGGCCATCTCCGCGTCGGTGGGGGGC
CGGAGAGGGTGGAGCGCGCGGGGCGGCGCGCGGTGCGGCGCGGGGCGGGGCGAGCGACGT
GCCCGCGCCCGCGCCACTGCCACGGCCCCGACAACGACCAGTACGCCGCACGACACGACG
CCGATCAGCAGCGCCACGTGGTTAGCGGCAGCAGAGGCGGGGGCGGAGGCGGGGTGCGTG
TCCGGGTGCAGGTCGATGAGTCGCGGCTGCGGCACGTCTGCGGAGTGCGCCTCGCGCTGT
GCGTGCGCAGCGAACACGCGCGGGGACAGCGCCGCGCCACCAGCACCACTCCCAGCGCCA
CCAGCCGCCTCCCACTGTTGATCCCTGGCGACGTCCGCCTTGTCCGCCATGCCGCTGGGG
TGCAGCTCGCGCGACAGCCCCATCTCACCACCACCACCACCCCCAGACATGTGGGGATGC
ACCACGGTCAACGTCTGTACGTATTCGTTGCTGGTGAACCTGCCGTTGAGCTCGGAGCAG
GTCAGTTTGAAGACGCGGTTGAGGTAGTAAGCCGGCTTCTTGTTGCTGTACTCGATTTCG
CGTAGCACCTCCTGATAGTTGTGCACGGTGTCGGCGCCGGTGAGTATGACGCCGTCGCGC
GTCACGGCAGCGCGTATGTCGTACCGCAGCGGGAGCTCGGCGGCGCCGGTGTCGCCGGCG
GAGGCAGCGGGTGCGCCCAGCGACAGCGCCTCGTGGTCCGGGTTTAGCGCCGGGTACACC
GACACCACGCACGAGTCTAACTTCTGCATCTCATCTGCTAAAGGATGCGCGTTCGACCTG
AGCGTGAGGGTGAGGTCCGGGAAGACTGTGAGTCCGGCGCGGAAGTGCGCGTAATCCTGC
GAGAGGTCCGCACTCCCGTTCAGGAGGATGGAGGGCGTCTGCGGCGCCAGCACCATCACG
TACGACTCAGCCGGGAGCGCCTTCAGCACGCGACCGTTGTCGCAAGTGATGGTGGTGGCG
ACATGCACGTTCCTCCTGCCGGGAGTGGGGAACGCCCTCCCGTCGCCGTAAGCGACGCGA
CGCAGCAGCGTCTCGACGTCGGCGACGCCGTCGCCCTCTACCGACACCGACTTCAGATAT
AGATCGGGCGCGAGGCTGAGTCCCTCCCGGCAGCGCGAGACGCAGGAGAGCGCGTGTGCG
GGCTGCACGTCGCCGCGGACCAGCCCGAGCCCCGCGACCCACCCGCGCAGGTAGTGCTTC
ATATCGTTCTCTGTACCTTGCCAGCATGCTCCGACAACGAGAGTAGTGTTGAGTCCGTGA
GCCGGATGAAGCGGCCAGTCATCGATCACCTCGGGACCCTTGCCGTCATTAGAGTGGTAT
GTCTCGCCGTCCACAACCAGCTCGACGTTCGGGAAGCGCACGTTCAGCGCGTAGTGATGC
CACTCGTTGTCGCACACCTCGGGAATCTTCCACCTCCACTCAGCCGGACGGAATATATTG
AGATCGCCATCGCCAAAGTCACGGCGCAGCAGCAGGATCAATCTGCAGTTCCTCACGAAC
AGCGCGAAGTGGTGGCGGTTCATCTTGTGATCGTCGGCGAGGCAGAGCACGTGCTCCTTG
CGATGCTTGTCCCCGTCCGGCGGCGGCGCGTGACGCAACCACGTAGTGATAGAGAAGCTG
CCGGCGAGAGAGTGTGAGAGCACCGACTCCGGCACCACGGCAGATGTCTCGCCGTCGAAC
TCGAACATCTGCTCCCCATCACGACCAGAATCAGGCTTCAGAGACTTAACCCACTCGTTA
CCAGCTCCTGGACTCGGCAGGAGGTCGATAGTTTTCGGGTCCAAACCGCAGATGGTGCGC
TGAGCGTGCAGAGAATAGGTATCCCTATCGCATCCGGTACCGGCCCTGGACGCTTGCAGA
GTGACAGCGGCCTGGATGCGGGTCACTCCTGGACAGCGTTCGTCCGAGGAGCACGTCTCG
AGTCTTGCGGCGGGGAATAGCGCCAAAGGACCACTCCCGGGGGCGTAGTCCACGCGCTCC
GCAACACCTTTCCATCCTGCTCGACAAGGTTTGTTGACTTTGATAGTAACCATCACCGGG
CTGGACTGCATCATCCCACAATCGTACGCGACAACGGATAAAATGTGGTTATGTGACTTC
TCATAATCCAGTGGTTCTGTGTTACGAATAACTCCTTCAGCATCGATAGCGAAGGGCTGG
CTCCGGTCAGTCAATATCTCGTATTTGCAAACGTCACCGAACCGAGGCGTGCAGTCCTTA
TCAGTGGCCTCGACTTGGAGTATCTCGTCGTAGATGCGCCCCTCGTCGACTGTCTTAACG
TAAGCGGCTTGACTGAACACTGGGGCGAATTCGTTTACGTCTGTCACCGTAATGTGTACG
GGCACCGTGTTGGAGTAGGAGCCATCGCAACCGACGGCCGCGATGTCGAATTTGTAGTTT
CGTCGTTTCTCACAGTTGAGCGGGTATCGAACCCGGAGCCTCGCTTCGTTCTCGTCTATC
ACCATTATCTCGAAAGGAGCTTCCCCATGATGCTTATTATTCAATATGAGGAAGGAACAC
AGTGGTCCGCGTGCCCTGATGGGCGGAGTCACCTCGACCAGAGTTTCGTTTTCCCGTATC
AGTCCATGGTATCCTTCCTCCGGCTCGGCCAGCTCCAAATATGGAACGTCTTCATTGTCG
TTGTTTCCCTCGGCGCTGTACACCGAAGTTACCAAAACTCCGACGCACAAAACGCTCAAG
AATCTCACAATCATTTTGTAAGATTATTTTACAGCACTGAGTTCACAGTTCTACCGATAA
GTAACAAATTACACTCTCGACATAATCAAACCAATGACACTCACGCTGTCGATCAGCGAT
CGTACTTTCGCAAATGGCGG
(5780 bp)

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