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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29820_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_topoisomerase_2-binding_protein_1-B_[Amyelois_transitella]
Ontology
GO:0000076 P DNA replication checkpoint signaling
GO:0000785 C chromatin
GO:0000922 C spindle pole
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0019900 F kinase binding
GO:0030174 P regulation of DNA-dependent DNA replication initiation
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0035563 P positive regulation of chromatin binding
GO:0045860 P positive regulation of protein kinase activity
GO:0071163 P DNA replication preinitiation complex assembly
GO:0071165 P GINS complex assembly
GO:0071168 P protein localization to chromatin
Transcript
Level		FPKM:2.89 TPM:2.90
ORF EntryO_SariMG12942_5prime_partial:A_SariMG_comp29820_c0_seq4
Sequence
(Nucleotide)
TTGATATGCCAATGTTTGAAGACTAAAGTGTATTTTACATGTGTTTTATTGTTTTCATTT
GATAGTTGTAATAAGTTAAAGATGAACGAAGAAGTTAAAGTTACATTTATAATTCCAACA
GACTGTCAAAATGAGAATGAATGTTCGGAAGATATGCAACTTGCTTTTGTCGCAGCCGAA
CAACATAGCGGCGGTGGTATACAGTCTAAATGGGTGCACGAAAGTTGTCTAGTAAAGTCA
TTAGAAGATATTACAAAAAGAGATGTCTTCGTATTATCTGAATTTAAAGGTGAAATATTT
GATAAACTGCGCAAGACAAAATGCTTGGTGGTTGGTCCGCGATGTCTTGCTTGCTGTCTA
ACAGAAGGTACAGCAATACCATCAGGACCTGAGCCAGTCTACACTGTGGCCATGAGAGAT
TTGATGGTAACAGCTAGTGGTCTCACTAAAGAAAAGAAGGAAATAATTAAGAAGAAGGTC
CACTGGATGGGCGGTATTTATAATACTGCGATGACAGTTGACACCACGCATCTCATCTCT
GACACTGTATTATCGGAAAAGTATATTAAATCAGTAGAAAAAGGAATACCAGTAATGTCG
GAAACATGGGTAGAAGCGGTTTGGGAGGCATCGTTACGTCTCAATATCAATGGTTCATCG
GCAGATTTCGATGCTCATCGTTTGCCAACCTTCGCTAACTTGCAAATTACAACATCGGGC
ATTGCCAAAAGGGATAAGCAAATAATTATGAAACTTGTCAATGATCATGGTGGAACATTT
TCTGGAGCTTTCCAAAGTGAGACAACTGATGTGGTTGTTTTGACGAAGGAAGGTATTGGC
AGTGAAAAGTACAAAGCGGCTATGGAATATGGAAAGGTCTGTGTTTTGCCAGCTTGGGTT
AAGGACTCTGCAGCCAGGGGTGTGGCGTTGCCAGTCACTAGGTACAAGATAACCGGTGCC
TCCACATCGTCACCGTTGGCCGAACACCGTTTGCCTGATATGAGTTTAAACTTCTCCCGA
ATAACGAACTCGCGGCCGCCGAGTAACTTTGTCGACGAGACGAGATCCACAGACGTCTCC
ACAATGTCAACTAAAATTAAGTTTTCACAGGAAATGAAAAAATCTAATGACTCTATGGAC
AAGGACATACAAATGGCGTTCGAGAATTTCGACATGAGCCTAATAAAAAAAGCCGGGCCG
ATTTTCGATGGATTTTGTATATGGGTGTGCGGTGTGGAGGGCGTGCACCGGGAGCGGTGC
GCGGCGTGCGTGTCGCGGTGCGGCGGTGTGCGCTACGACGCGGCGGCGGCGCGCGTCACG
CACGCGGTGGCGGGCACGCCGTCGAGCGCACACGCGGCGTCCAGCGCGCTGCCCGCGGTG
CCGGTGCTGTCGCCGCTCTGGCTGCTCCGGAGCGTCGAGGCAGGCCGGGCACTCGAGGAA
GCCGACTTCGTAATAGATGTGAAACCGAAGACACCGATGAAATGTAGCGGTCGCAAGCTG
CAAACAGATGTGGCGTCACCTATGAGCAAGAGAAACTTGCAGCTGTTACGGCGGGGGCCT
CTCGACTTGCCTCCTCCAGGCCCCGCGCCCGCGCCAGCACCCCCCGACCACCTGGATATA
GAACCACACGAGGATCTCGTGAACCACTATCTAAGTCAAGATGTACAACAAAATCTATGT
ACTCCTAAGAAGCAGAACCCAGAAGAACCAGGACCACGAGCTGAGGAGACAACCCTACGA
GAAGAACGGCCCGATATAACTGAGGATCTTGGAGACGAACCCACTGAAGAAATCGAACAG
ATATTTAGAGGTATGAAAATTGAAGTGCAAGGGTTAGACGACGAGGCGGTCATTGAGATA
GGGGCGGAAGTGGGCGCTGCCGGCGGGGTGCTTGCCGCGGGGGGCGCTGGGGGCTCGCAT
GTGCTCGTCCCCCTCGATTTTGACCCTGAGGACCTGATTACGAAGCACGCTGAACCGGTC
ACCGTCTTCTGGGTGAAAGAGTGCCTGTCGGAACAAGAGCTGGTGGAGATCCAGTACTAT
CACCGGCCGGTGCAGGTCCCGCAGTGGGGGACGGAGCCGCCGCTGCGTGGTGTTGTCGCC
AGCCTCAGTACGTATAGTGGGGTTGAGCGCGCCTTCCTCGACGAGCTCGCCAAGCTGCTC
GGTGCCACGACCCAGTTGCGTTTCTGCCGTCGCAACACGACAAACGCGATAGCATCCACC
CATTTAATATGTCCGACTGCGTCCGGTGATAAATATGCCGGTGCAGTGAAGTGGGGTCTG
CCGGCTGTGAGGGCCTCTTGGCTGCTGGACTGCCTTAAACAGGGGAGGAGGGTCAGCGAG
AGGGAACACCTCGTCGGGGATACTAAGGCACCCTCATTAACGGATGACATTGAAGAGGGG
GTGGAACCCGTAGAACAAGAGAAGGAAGAAACAAGCAAGGCCACAGACAAGGAGAACACA
ATGTTACCACCCGTTGCAGCAAATATTCCGAGACGTGGTTCGATGCCCGCTGTTGAAAAA
ACACCTATTGGGAAACATCTCAGCGATGGAGACGAGATGTCACCAGCTTCCCGGTACATA
GCCATGGCGCGTCAGGGCCTGCTCGGTGGGGATTCACAGGAGACTCCCAAACGAGTGAAT
CAACTCAAACAGGATGATAAACAAGGTGGTGGTAGTGGTGACGGGCTCCGCACGCCGCCG
ATAGAGGACGCTCTGTCTAGCCCCAACCTGATGGGATTCAGCCCGAGCACGCGGCGCCGC
TTACAGGCCATACGCCGCGGCGAGATGCCCTCCGGCCCTATACGTACACCCACTGACCCC
TTCGAAAGGAACGTAGAGACGCCCGATAGCGAGTTCGGATGCGCCCTCGCCCCGGACTCG
GGCCGCCTGTCCCCGGAGTCCCGCAAGCGGCTGTGGAGGCTCGTCAACGAACTGCCTTCG
AAACAACCTGACCCAGTCAGGGACAAACATACGCCTTTATCAGAGATCCGGAATAGATTT
CTCGCTCAGTATGGCGGTGAATCGTCGACTGGTCATATCGGCGCTTCTAGAAAGTTACAA
CTTCTGGATTCACCGGATACGCCGCCAGCGAAACTACTTAAACTATCCGATAATCGGGTA
GGTGGGGCAGCGGGGAACGTTACGTACGGGGAACTGAAGGGGAGGACGGAATCGAGCGCT
GCAAGCGCTGCGAGCGAAGCCGGTTCGCTTGTAGAGGTACAGCTGCAGCGGCTGGATGAA
GCGCTGGCCGGCCGGTTCAGCTCGCAGCGGGCACGGAGACCCACTCGGGACTCCCTCAAT
GCACCACAACCACCGCCGCCGCTGCCGCCCGGTGAGAGTTACCTTTAGTTATGTTAACTC
TTCATTAGGAGCGTTCTGTTATAGGACGTATTAAAAATCTCTTTTTTTTTAAAAGAACTT
TTTAATCGCGGAGAACTTTTAA
(3442 bp)

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