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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29814_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_afadin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0017016 F small GTPase binding
GO:0021537 P telencephalon development
GO:0021987 P cerebral cortex development
GO:0030054 C cell junction
GO:0034334 P adherens junction maintenance
GO:0043547 P positive regulation of GTPase activity
GO:0045177 C apical part of cell
GO:0048854 P brain morphogenesis
GO:0048872 P homeostasis of number of cells
GO:0050839 F cell adhesion molecule binding
GO:0060019 P radial glial cell differentiation
GO:0060563 P neuroepithelial cell differentiation
GO:0070445 P regulation of oligodendrocyte progenitor proliferation
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:3.11 TPM:3.12
ORF EntryO_SariMG12899_3prime_partial:A_SariMG_comp29814_c0_seq4
Sequence
(Nucleotide)
GGCGAGGCGCGGGGCGGGTGCGGCTGGTGGGCGAGCCGGCACAGTCCGCCGCGCTGCAGG
GGCGCGACGAACTCGGCGAGGCCGGGCGGCACGCCGCGCACCACCTCCGCGCTGAACCCG
TCCGCGGGGACCAGCAGCCCCGCGCCGAGCCACGAGCTCTCCTCCAGCCGTACCTCGCGT
CCGTCAGCCCGACAGAGTTCGTCGGCGCGGTCGCGCGCGTGCTGCACCGCCGCCTCCAGC
ACGTCGGGCGCGACGAGCGGCGCGAGCAGCGCGCGCACCTGCACCGAGTTCAGCTTGAAG
CACGCGCCGAGCGCGCTCACCGCCTCCTCGCCCGTCTTGTATGTACCCTGGATAAGACGC
GCGGCCTGGTGCGTCCTGGCGAGGTGACAGTCCGCGGCGAGCTCAAGCCCTTGCCGCTCC
GCCCACGCAGCGAGCAGCGCCAGCCGGCTCGAGAGCGCCGCGCCCCACGCACGGCTCACA
CTGCTCGGCTCCGTCACCAGCTTATTAAAGCAGACGGCATTGATGTAGTGAAAGAGATGC
GAGAAGAGTTGTATGGTGAGAGCCGCGTTGACCCGGCACCGGCGCAGCAGCACCATGGCG
GTCGCGAGCGCCTGCAGCGTCGGCGCCGTCGCCTCCGTCGCGTCCGCCGCCGCGCCGCCG
CCCCCGCCCCCGCTCAGCGTCAGCGTGCACAGAGCGCGGGACAGCTCCTCTTGGAAACAC
GTCACCAGGTTACTGAAGGCCGTCTGTACAGTGACCGGTAAGAGCTCTTGCGCTTGCGTT
GAGAACGATGATATATGCCGGTCGTATTTCAGGAAATGTAATAATTCACTCGCATTCGCC
ATCCAAAAAGCTTGCGCGGCCGAATCCGCTGCACGTTCCTGCACAGTGGCGTGTATGAGA
GTGGCGACGTGGTGTAGGAACGCGGTCAGTTTATGCGCGCGCTCCGTCGGCGTCAGCTCC
TGCCGGTAATGCGTCGACGCTCGGTACCTGGCACATAGGTATAGCGTATAGACCGGGGCG
AGTTTGAACGCGGGTGCGTGTGGGTCGAGGCGCGTGATGACGGCCGACAGGAACTGCGCC
TGTCCCGCGTCAGGGAACTCGAGCACGGCCGGCAGGATGGCCTCCTGCCCGCGGGGACCT
CCACCGCCAGACCTGTTCTCATGTCCCGAACCGCCGCTCTTCGCGCTACAGATACTCTTA
GTCTCAACGTTCCCTTCCAAATCGAACGTCGTCTCATAGTTATCCTTGTACTGTGAATTT
GTAGACCTATTCGCGTTGGAACTCTGCTCGTGGACATTGTAGACGGACCCCGTGTGGTCA
TCCTTCCCGTAATCGTCCTTCGAGTCACTCAAATGTTGTGACATCATGAGCGATTCGTTA
TCGAGTTTGAGCGTGTTGTTGTTGTTGTAGGGCGCGGGATCATTCGAGTCTCTGTAGTAG
GTATCATTCGAAACGGGACTCATGGTTCTGATGTAGTCGTTGTCAGTCGTGTTCGCGTTC
GAGTCGAGCGTGTCCGGGTGATGCGAGGCGAGCGACGTCGGCGACATCGCACCGCTGTTC
TCACCGGGCGACGTCGGAGACCGGTCGTAAATGGAACCGGATCCATAGTGTTGCGATTGT
GCCAAATTTCTGTTGATAATGTTCTCTTGCGTTGGATCCAAGAATCGAAATGTCGAGACT
CGGCCAAATTTCAGAAGACAGTCGTGCTGCAATCGTTGTGTGTTCACAACTCGTTGTCCA
TTGAGGTATACGTGTGCATCCGTATGCAATGGAGTGACTGTGTAGCCACCGCCTTCTGCG
GGCGCAACTACGCAATGGCGAGATTGTATTGAAGGACCATACAGTTGCAACGTTGTACCG
TTCCCGGATCCGACTTCAACAGCTTCTGTAACTCTGACCCTGCGTCCATTTTCTAGAGGA
GAAGTATCCGGTGCAACTTCCACTAGTACGGGCTCGGTGCTTGGTCGAACGCCAGAACCG
CCCGTACTAGCTTTTTTCTTGCGACGCCGAGGCTGAGCGTCCGCCGGCCGCCGCCGTACG
TGGAACATTATGGAGCTGCGAGTCATATTCATCAACGCCAGCGGACACTCGTCGTCTTCT
AGTATATACTCCGAATTGTCACTCTTGTCCTCCTGAACAATACAATATTGCTGGGGATCT
TGATGCGACATCCCGTATTTATCGAGGGTCTCCCGTAATACTGTAGCCGCCGAGTCGTTG
ACAGACAGAAGCAGAGTTATATACGAGACGTCTGGTCTCAATATACCACCGTATATCCTT
AATGTTCCGCCTGTATCGGGGCCGCCATCTTTCGATTTAAACTGCTGCAGCTTCCTGCCG
AGCTTCTGTTGTCTACGACGGCGCATTACAGCTTCTGGATTGCTTATGCTGCGCATGAAA
GATGTCTCCGGTAGTTCTGTATATAATTTTTCAGCGACAGGCCTGTTTTCATCATTTGTG
TCAGATTTTAATCTGGACAGTTTCTCCTTTTTCTTCAGTTCTTTTTTCTCTCTTTTCGAT
AATTTTCTTTTGAAATTCTGGTCGCCCTTATCACTTGCCGAGGATAAGGGAACCTCGTTG
TTGCTAAGGCACTTTAACAGAAATCGTCCTTCGCGATCATCGGCGTGCCAGTTGAGCTGG
ACCAGGAGCGGTTTCTCGTGGGGCTCCAACTTGCGCTCGTCGTCTGGCCCGTGCGTCTCC
CACAACGAGTACGAGCCTAGAGACAGCATGCGCATGTCTGGACGGAACTTCTCGATAAGA
GTTTCTATGACATCGCTGACTGTAGCGTCAGAAGCGACACGGATACACTTCGTTGCAATC
TTCTGACCCAAATCTTGAAAGTAGAACCGCATTACACCGTGAAATTCCAAATTCTCATTT
GGTTCACTTAAAGCGAACAGGTCCAGCCGATTAGCGTTCCACTGTTGAATCATGTTGCGG
AGCGCCTCCCGCTCCAGCATACGCTTGTCCGCTGCATCCATCCTGTCACCGCATCAAGTC
AGCTTCAAGCACTTTTTCTGTACGATCTGCTACCACAAAAACAATTATAGTTTTTTAATA
TAACGTGTCATCTGGCAGTGATTTGATAAATATTCTCCAATAACATGCAAACATAATAAA
TCGAAGGCCAAATTTACTAAAAACTATCACTTCAATAAAACTTTGATATCGGTCAAAAAC
TTTTCAAGGCACAATATGAACAGCTAACTTCATTTTTTATCACATCACTTAAACCCACAA
TTCGTAATTCACAAATAAATTTTGTTGATAAAACACACAAACGCAGTTATTGCTTCCACG
ACTATAATTATTAGAAATAAAACTAAAG
(3328 bp)

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