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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29814_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_afadin_isoform_X3_[Bactrocera_cucurbitae]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0017016 F small GTPase binding
GO:0021537 P telencephalon development
GO:0021987 P cerebral cortex development
GO:0030054 C cell junction
GO:0034334 P adherens junction maintenance
GO:0043547 P positive regulation of GTPase activity
GO:0045177 C apical part of cell
GO:0048854 P brain morphogenesis
GO:0048872 P homeostasis of number of cells
GO:0050839 F cell adhesion molecule binding
GO:0060019 P radial glial cell differentiation
GO:0060563 P neuroepithelial cell differentiation
GO:0070445 P regulation of oligodendrocyte progenitor proliferation
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:3.27 TPM:3.28
ORF EntryO_SariMG12894_3prime_partial:A_SariMG_comp29814_c0_seq3
Sequence
(Nucleotide)
GGCGAGGCGCGGGGCGGGTGCGGCTGGTGGGCGAGCCGGCACAGTCCGCCGCGCTGCAGG
GGCGCGACGAACTCGGCGAGGCCGGGCGGCACGCCGCGCACCACCTCCGCGCTGAACCCG
TCCGCGGGGACCAGCAGCCCCGCGCCGAGCCACGAGCTCTCCTCCAGCCGTACCTCGCGT
CCGTCAGCCCGACAGAGTTCGTCGGCGCGGTCGCGCGCGTGCTGCACCGCCGCCTCCAGC
ACGTCGGGCGCGACGAGCGGCGCGAGCAGCGCGCGCACCTGCACCGAGTTCAGCTTGAAG
CACGCGCCGAGCGCGCTCACCGCCTCCTCGCCCGTCTTGTATGTACCCTGGATAAGACGC
GCGGCCTGGTGCGTCCTGGCGAGGTGACAGTCCGCGGCGAGCTCAAGCCCTTGCCGCTCC
GCCCACGCAGCGAGCAGCGCCAGCCGGCTCGAGAGCGCCGCGCCCCACGCACGGCTCACA
CTGCTCGGCTCCGTCACCAGCTTATTAAAGCAGACGGCATTGATGTAGTGAAAGAGATGC
GAGAAGAGTTGTATGGTGAGAGCCGCGTTGACCCGGCACCGGCGCAGCAGCACCATGGCG
GTCGCGAGCGCCTGCAGCGTCGGCGCCGTCGCCTCCGTCGCGTCCGCCGCCGCGCCGCCG
CCCCCGCCCCCGCTCAGCGTCAGCGTGCACAGAGCGCGGGACAGCTCCTCTTGGAAACAC
GTCACCAGGTTACTGAAGGCCGTCTGTACAGTGACCGGTAAGAGCTCTTGCGCTTGCGTT
GAGAACGATGATATATGCCGGTCGTATTTCAGGAAATGTAATAATTCACTCGCATTCGCC
ATCCAAAAAGCTTGCGCGGCCGAATCCGCTGCACGTTCCTGCACAGTGGCGTGTATGAGA
GTGGCGACGTGGTGTAGGAACGCGGTCAGTTTATGCGCGCGCTCCGTCGGCGTCAGCTCC
TGCCGGTAATGCGTCGACGCTCGGTACCTGGCACATAGGTATAGCGTATAGACCGGGGCG
AGTTTGAACGCGGGTGCGTGTGGGTCGAGGCGCGTGATGACGGCCGACAGGAACTGCGCC
TGTCCCGCGTCAGGGAACTCGAGCACGGCCGGCAGGATGGCCTCCTGCCCGCGGGGACCT
CCACCGCCAGACCGGTCGTAAATGGAACCGGATCCATAGTGTTGCGATTGTGCCAAATTT
CTGTTGATAATGTTCTCTTGCGTTGGATCCAAGAATCGAAATGTCGAGACTCGGCCAAAT
TTCAGAAGACAGTCGTGCTGCAATCGTTGTGTGTTCACAACTCGTTGTCCATTGAGGTAT
ACGTGTGCATCCGTATGCAATGGAGTGACTGTGTAGCCACCGCCTTCTGCGGGCGCAACT
ACGCAATGGCGAGATTGTATTGAAGGACCATACAGTTGCAACGTTGTACCGTTCCCGGAT
CCGACTTCAACAGCTTCTGTAACTCTGACCCTGCGTCCATTTTCTAGAGGAGAAGTATCC
GGTGCAACTTCCACTAGTACGGGCTCGGTGCTTGGTCGAACGCCAGAACCGCCCGTACTA
GCTTTTTTCTTGCGACGCCGAGGCTGAGCGTCCGCCGGCCGCCGCCGTACGTGGAACATT
ATGGAGCTGCGAGTCATATTCATCAACGCCAGCGGACACTCGTCGTCTTCTAGTATATAC
TCCGAATTGTCACTCTTGTCCTCCTGAACAATACAATATTGCTGGGGATCTTGATGCGAC
ATCCCGTATTTATCGAGGGTCTCCCGTAATACTGTAGCCGCCGAGTCGTTGACAGACAGA
AGCAGAGTTATATACGAGACGTCTGGTCTCAATATACCACCGTATATCCTTAATGTTCCG
CCTGTATCGGGGCCGCCATCTTTCGATTTAAACTGCTGCAGCTTCCTGCCGAGCTTCTGT
TGTCTACGACGGCGCATTACAGCTTCTGGATTGCTTATGCTGCGCATGAAAGATGTCTCC
GGTAGTTCTGTATATAATTTTTCAGCGACAGGCCTGTTTTCATCATTTGTGTCAGATTTT
AATCTGGACAGTTTCTCCTTTTTCTTCAGTTCTTTTTTCTCTCTTTTCGATAATTTTCTT
TTGAAATTCTGGTCGCCCTTATCACTTGCCGAGGATAAGGGAACCTCGTTGTTGCTAAGG
CACTTTAACAGAAATCGTCCTTCGCGATCATCGGCGTGCCAGTTGAGCTGGACCAGGAGC
GGTTTCTCGTGGGGCTCCAACTTGCGCTCGTCGTCTGGCCCGTGCGTCTCCCACAACGAG
TACGAGCCTAGAGACAGCATGCGCATGTCTGGACGGAACTTCTCGATAAGAGTTTCTATG
ACATCGCTGACTGTAGCGTCAGAAGCGACACGGATACACTTCGTTGCAATCTTCTGACCC
AAATCTTGAAAGTAGAACCGCATTACACCGTGAAATTCCAAATTCTCATTTGGTTCACTT
AAAGCGAACAGGTCCAGCCGATTAGCGTTCCACTGTTGAATCATGTTGCGGAGCGCCTCC
CGCTCCAGCATACGCTTGTCCGCTGCATCCATCCTGTCACCGCATCAAGTCAGCTTCAAG
CACTTTTTCTGTACGATCTGCTACCACAAAAACAATTATAGTTTTTTAATATAACGTGTC
ATCTGGCAGTGATTTGATAAATATTCTCCAATAACATGCAAACATAATAAATCGAAGGCC
AAATTTACTAAAAACTATCACTTCAATAAAACTTTGATATCGGTCAAAAACTTTTCAAGG
CACAATATGAACAGCTAACTTCATTTTTTATCACATCACTTAAACCCACAATTCGTAATT
CACAAATAAATTTTGTTGATAAAACACACAAACGCAGTTATTGCTTCCACGACTATAATT
ATTAGAAATAAAACTAAAG
(2899 bp)

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