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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29785_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat-containing_protein_59_isoform_X3_[Bombyx_mori]
Ontology
GO:0000349 P generation of catalytic spliceosome for first transesterification step
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0001824 P blastocyst development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0021987 P cerebral cortex development
GO:0071010 C prespliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
Transcript
Level		FPKM:0.08 TPM:0.08
ORF EntryO_SariMG12830_complete:A_SariMG_comp29785_c0_seq4
Sequence
(Nucleotide)
GTTTTACTACTCGTATAATAAACAATTGTGTCCATCGATATGATAAGAAACAGTTGATTA
GTTTTTAAATAAAATATAAATACTTATATAAAACAATGTCAGTGCATTGGAGTTCAGAGA
TATTAAAATGGGAGTATCGAGAACTACAAGCAACTGCAATGACGGTAGATTTCACAGGAA
ACAATGTGCTGCTGGCTGGTCGCCGATGGTTGGCAATTAAGCAGATAAATCATGATGACG
AAGGTGCCGAAGTAGTTAAGAAGTATCCTCGCCACAGCAAATATGACGCTGCTGGCGCCG
AGTGGTGCCAGTCTTATCACGGTCAAAAACTGTGTGCTATTGCTAGTAATCAAAGAGTAG
ATGTGTATGAATGGAGAGCTGGAAATGATCTCACCTGTATTTGCTCCCTCCGTGGTCACA
CTAGAGTTGTCAGTGACACACACTTTCACAGACAAGATCATAACTTGATAGCTACATGTT
CTATAGACACATTTACACATATGTGGGACTTGAGAGATGCACGAAAACCAATAATTTCAC
TTTGTGCAGTTGCTGGTGCTTCACAAGTACAATGGAATAAAGTAGCATCCCATATAGTTG
CTACAGCTCATGATGGAGACATAAAAATATGGGACTATAGAAAACACTCCTCACCGATAC
ACTACATATCGGCACATTTATGTAAAATTCATGGTGTTGATTGGAGCCCGCATCATGAGT
ACCAACTTGTAACATCTAGTCATGATGGAAGTATCAAATATTTTGATATAAACAATGCTA
GAAGGCCGGAGAATGTAATTATGACAAATTTTCCTGTGTGGCGTGCTATATACACTCCCT
TTGGCAGTGGACTTCTTACTATTGGTGTTGGTTGGGGTGGTCTACCAAGGGTTGAGCAGG
CTGGTGTTATTGGCATCTGGGTGGGAGGAATGTTAACTCACAGATTAGTTGGACATTCTG
ACACTGTACAGACAATGGTATGGAGACCAAATACATCACCTTCTAACTATCAGCTGGTTA
CATGGGGTAGAGACCAATCACTTAGAGTGTGGTCAATGCATCCCTCTCTACTCAAAATGT
GCAATCACTATTTACCTGATGATTCAGAGAATGATGATGATAACAACAGTGACACTGTGA
GCTACGCCTCTACAGTTGGTTCAGCAAATGAGATTTCTATCACTGACAAAGGACAGGACT
CTATATTGAATAGGTTACCTCACAAAACATCTATTGATGAAGAGTTTGAATCTATACGTG
AAATGGCTAATATTGAAGTTACTGATATGAATATTGAAACCAGGACATGTCAGATCCATT
CGGAACGTAATGGATATGTTGCCAACTTACAAGTAACTTTCCCCAGAAATGTGACTGAGC
AAACAATACCAAAATTTTCCTGGTTATCGGGTACTAATGTAGATAGTACGACAACCATCA
AAATATTACAAAATATAAACAAAACAGCTTATCGTAAGAAGAAAGAGGGGCACAGATGTC
TGTTACATTGTTTAAAAACTTTGGCAACATCTATTGACGAGATACCTGTAAAATCGAATG
ACGATAGCGACTCCATGAAATCAAGTCAAAGAAGTCAATCAGAGAGTGAAAATGCAGGTG
ATTCATGTATACCTTTTCCAAGGACTTGTGGAGCTAAATGGTGCGGAGTGAGCACACTAG
TTGTTTTTAATCGTCCTGCCAATGCTAGAAGACTTTCCTTGAAGCATGAATCCGGTACTC
CACGTTCGATATCTTCTTTGTCTTTGATGCCCGGGCTGTTTAGTACAGGATATAGTTCTG
TCTCTCCTCATGCGACGACCACACCACCACTTCTTACATAATAATCTGCAAGAGAATTCC
ATAGATGGCCTAATTGATCAGTGTATCTTCTGAGTCCACCTCTTATAATGGCATCAACAT
TAAGAGAATGTATTTGATCTGGGTTTTTAGATATCAATTCACATAACTCATTCCATAATT
GATGGTTTGATTTCCCATGTTTTGATTGAAAATTTTCATTGTTGACAATTTGTGCTAATT
TAACTGCAGCTTCATCTAGCTTATTAATAGATATTAAATAGTCAATATACTCTTCAGTAT
CTTCAGGGCACAATTTTAAATATCTTCGAAATACTCTAACAGCTGTTTCTGGTATGTTGT
GTTTTTTTAAGAAACTTAAGTAAAGAGGCCATATTCGGTGATGTTGCGTTATGGGCAAAG
CTCTTAAAGCACTATCAAAGGCTTTTCTTGTTATAATTATTTTACACTGATCAGTTAAGA
AGTTACAATAATCCATCCATATTCTAGGCATTTTATGCATAAATACTAAAGATCTTTCAA
AGCAATTATTCACATCATCATAGCAAATATCTGTAATGCAGCGGCCACGAATCTGAGTTC
TTCTAAGTTTTAAGTAGTTATACCAAAGTTTAAACGAACCAGGTAATTCTTTGAGGGCTC
TTTCATAGATCATATTTATCTCATGTTTTGGTGCAGCTTTTTTATGTTCTATGTATCTCA
ACCAATGTTTTACAGAAAATGGATTGCGTAAGATCTCTTCTTCATAAGGGAGATCTTCTT
CAGTAAAAAATATATCAACTTCCTTTCCGTCGAGAACAGGCATTGTGAAGTAACTGTGTG
AATTAAAGAATACGTTTCATTTAAAACTAATAATGTAGTCAAATTATACGTTTT
(2694 bp)

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