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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29747_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		Ataxin-1_[Operophtera_brumata]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008022 F protein C-terminus binding
GO:0008266 F poly(U) RNA binding
GO:0008344 P adult locomotory behavior
GO:0008542 P visual learning
GO:0016363 C nuclear matrix
GO:0034046 F poly(G) binding
GO:0042272 C nuclear RNA export factor complex
GO:0042326 P negative regulation of phosphorylation
GO:0042405 C nuclear inclusion body
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043569 P negative regulation of insulin-like growth factor receptor signaling pathway
GO:0043621 F protein self-association
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048286 P lung alveolus development
GO:0051168 P nuclear export
GO:0060079 P excitatory postsynaptic potential
GO:0060252 P positive regulation of glial cell proliferation
GO:0098794 C postsynapse
Transcript
Level		FPKM:7.26 TPM:7.29
ORF EntryO_SariMG12713_complete:A_SariMG_comp29747_c1_seq1
Sequence
(Nucleotide)
AATTGCTAATGCGCTGGAACCTTGACATATTAACGTTATCACCAACTTAAAAGTACAGCC
GACAAAAAAAATCTAATAGTTAATTTAAACTTATTAAATTATTACCGTAATTAAGACAGG
GAAAAAGAACGAAAATATGATTTCAAATTACTATTATACTAACGGTACTGAGTGTTCAAT
GTTCCGGGATTACGTCACCAAAATGGCGACCAGGCGCATCAGTAATTTGCGGACCTTATA
CCGCGCTTAGATACCGCAAATTAATTTAGAATCACGCACACATCGGATCACTGGGGCAGT
GTCAATTACCGCTTTTAATACGTCAAATCGAACACAAACAGCTTTGATAGAGTAGGAGAG
AGGTCCCTGCGACGAAGGCGATCACAACACTATTTTTAAGGTAGCAGTTCTCCGGGTACG
GTGTCCGCTGTTCAACGTTTCTTGTGAGGAGGTATGTCCTCGCTTACGTCGGAGGCGGAC
CAGCGACGTTTGCGAGCGTCCTCCTTAACGCTCAGGTTCTCTGGGTGCGTTTGCGGGGGA
GCGGGGGACGGTGCGTGCTTACGTGGTACTAGTGAAACGCAGACGTCGCCTACCTGCAGC
CGCTGCACGTGTAACCCGTACTGGGCGAGCGTACGTTCAGGCCTGAACGATGCCCACCCG
CGACCGTAAACGAAGAACGGATGTTCCACCGTCGATTCCAATTCCACCTGTGAACGGTTT
CTGTCATACGTTAGAGTTAGCGCTAGCCTCTCCCCTCGTTCTTCGAGTCGCAATAGAGTA
CACTGCGTGAGTGCTAAATCGCCATTACGGTCCGCGCTCATAACAAAGTCTTCAGTTCTC
ATCTCTTCGACACGCCTTAGGGAACCGTCTTCGAGTCTAATGAGTGCTCCGCGACAGAAG
TGTGCCGCTGGAGCTCCACGTTCTGGCGACGTAGGGGGCTCTTCTCGAGGTGGAGGCGCA
GGCGCCGGTGCAGAAACAGGCGGTGACTGCGGCGCCGGTGCTGGCGGCACGAACCCCGAC
GAGGGGCGTGGCCTCAGCGGGTAACTCGTCTGCGGCTGCTGCGCCCGCGACCGGTACAGG
TACGCGTAGGACGTCGGATGCGGTAGAAACGGAGCGTAGGCAGGCACCGAGGGGAAGGGC
GCTTGAGGCGTGGGCGCAGGGTGTGGAGCGTGCGGCGTTGGTAGCGGGTCGCGTACCGGC
GGCCGCCGTGGTGCATACCGCGCGTAGGGTCGCGGCGGCGGCGCTAGGAACTCCGGCGTC
ATCCCGGCCGGAGGCGGTGGAGGGTACAGGTGGCTCAGCTGCCCGAGCTGCAGCTGGGCG
AGCGCCTCGCCGGGCAGACTCGCCGAGATCATCGGACGGGGTTTCGTGGCACTGTCTCGA
CACGGTCACGGGCACAGCATGGCAGACTGCGGGACACAGCAACGGTTGAATGAAGATCTC
ATCCGAAGAACAGTTCCTTCAGCTGCCTCTCGGATTTGGTCACTTGTGTCCGGAATCCAA
TAAATAATACACGATCGTGACGTCCACGAACATTCACTACTCGCGTGTCGGCTTCACTGC
GGTAGGAAAATCAACGGGCGGAGATCAGCATGAATGATATGACGGGTAAATGTCGCGACG
AAACAAACGCAGAAGAAATGCGGCATCGGCGCGGGTCGCAG
(1661 bp)

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