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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29713_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		Uncharacterized_protein_OBRU01_08225_[Operophtera_brumata]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005813 C centrosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
Transcript
Level		FPKM:5.72 TPM:5.74
ORF EntryO_SariMG12606_5prime_partial:A_SariMG_comp29713_c0_seq1
Sequence
(Nucleotide)
ATTTAATAAAAATGTGACACAAATACTTAATCATTTATTTCATATCCAAACATGTCTCTT
CCTTTTTCAAGCAATAACAGAGATGACTCCTTGATTCTTTCTAAGATTTCTATCAGTTTA
TTTTTAGGGAACACTTTATACAAGCATCTATTCTCTCCAGCAATAATGTTGCTCAATTTG
ACAGCTTCCTTGTGATTGTTAATGTCTTCATTACATTGTAATATTTTCAAGATCAAAATG
ACAACTTCTGGAATACATAAGCGTCTCAATGTTTTTAATTGTTTCATTCTCTCCATATTT
TCATTTTTACCAAATTTTTCTGATGTAATACTATCACTCTCATCTTGCAACCATCCACCA
GGAAATAATAAAACATTATAGAGTAAATTCTTAGCATGCTTTGATTGATGCAAAACAGCA
TTGGACCACCTTGCCTTTTGTTGTTCCACTTGTGCACATCTCTGTTCATAGTGAACTTTA
TCAGCAAATGATGCATCCCCTGATAGCGGTTCAACATCTTTTGGCTGACCACTAATGAAA
TGTCTGTACCAAGTAGCATATCCCTCTAAGCCATCTAAATATGCTTTGAGACATAAGTGC
TCTCTTAGTTCTGAAGAAACAGAAGGTACTTTATTCAGAAACTCTGGGAAGAATTTATTG
ACATTACCAATACAAAATAATGCAGCATCAGTGTTTCCAATAAATATAAATGTGCGTATC
ATGGCATTACTCAACCAAAGTGCCTCTTCAAATTGATTTGCAATCAATGAAAGCCATTCC
AGAGATGATATCACTTTGCTGATAAGGGTTTTATCCATTTCCACAATAGTAGTTTGTGTC
AATGTCAAGTCCAAGTTACCATAGCCTTGTTGTATATCAGTAATTGCTTTTTTTATGGCC
ATTCTAGCTGATGCTGCAATATCAATACCTGCACTTAACCCTGCTTTTACTACTCTTTGT
CTGTAATCACTTTTGTGTATGTGATACATAAAATTTGCATAAAGAAAAATTTGCCTTTCA
ACTGGTACTGTGGAAGTATAAAATGCTACAAGTTCTGGATATTCTACAGCTCCATCAATC
AATCGTTCTACTAGTAGCATCACATATCTTTCCAGTATTTTGTCCCCAACATCATGCAGT
GGATCCTTTCCCATCAATCTGAGCACTAATACAAGGTGAGCTAAAAATCGAATAAATCTT
TCTTCCGAGTTATCTATCCAATCAAGTGAATCTTGTAGAATAGCTCTAATATGACCAAGC
ATAAGATGTCTTTGACAAATTTGGTAATATGATTCTTTTTTGCCATCCATCATAGATTTA
ACAGCACTAAATATTTGTTGAAGACCTAGCTCTTCAACTTGAAGTTCAGACTGTAACAAT
TCCAAGACTTCACTTGTGGTTGTATTAGCATCAACTGTAGCATGATGTTCATGTAAAAAC
TTATCCACTCTAGCTTCAATTTGCACTCTTAAATGAGCCCACAGTAAATCCTCCCAACTA
CCATGACATGCTGGTAAAGCACTAGGAAGGTGGCCACTTAGAATACCAATTGTAGCTCTG
TAATGACAATTTTCTGTAATATTGTTGGCGACACCCAAAGCACACCACTTCCAAAGATCT
CTTGAAGGATTTCCAGTAATCTCTAAAGAATCTTTAACCTCCTCTCTATGTAAATAGTGA
AGTAAAATCCAACCCTGTAGTACAGCTCCACGCCAAGGTTGCCCTGCATTAATACACATT
GAAACAGCTTCTTTGAATTTACCACATCTCACTTCAGTAAATACCCTTTTACATAGATCA
TTATCATCTTTTAGATCATCAGAATGTATGACCTTTTTTTGACGTTTTGGAGCATCTGGG
TCGATACATGTAACCATGGAATTGTTTCTTTCTTTATTAAATAAACTAGTTCCAATCAAT
AACTCATGTAGAGTATTCCCCCAGTGTATGTTGTTACCAATAACCGGCCCACTAGATTTA
GTCGCTTCTTCTTGATAGGCAGCAGTAGCTTCTAGCCAATCTACTAGCAGTTGTAGGAGT
CTCAACTCGGAATCACTTCTAAAGAGTGCATTCACTAATGTTTGCTGAGATAAAGTGGTC
TCTGTAATAAGGTTATGCAATGATTCTGGATGCTCTGTAAGAGAATCAGAATACAAACAA
TGCAAGAGCTTCCAAGTGTTTGCTTCCTCAGCTAACCAATAGTTTTGCGAATTGCATCTA
TTCCATGGTTCCACTAATTCTAGTGAATCACAACACGCTTGACCTAACCTCGCCAATACA
TCAAGGATGTCGTTTGAACGACTTGCTTGAATTATTTCAAAAAAAGCTTCATTTAAGTCC
TCGCCGGCATTTCCTGCGTTTATAGTCATAGACGTATCGTCGAATACTTGCCGCAAACTT
GTATCGTTAAGATTTTTGAAAATCGAAGTATCGTTAAAAGTTGGTGTAACGTTCAAGGCA
TCTTGTCTTTGTAATAATTGTCTGTTGCGTCTGTTTTTAGATGGGGTATATTGTGTTGAA
TTCAATTGAATACTTGTATCAAAATTTATAGACATCTTTTTTGGTATCTCAGGTCTAACA
AATAGGTGTCTCAATTTTCTCACAGTCACGGTCCACAAAGTAAAGGTATACGCTATACAT
AACAG
(2645 bp)

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