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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29701_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein_isoform_X2_[Papilio_polytes]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:0.62 TPM:0.62
ORF EntryO_SariMG12546_complete:A_SariMG_comp29701_c0_seq3
Sequence
(Nucleotide)
TTTGCATAGTTTTTATAAATTTATTATAATAATAGATTATGTAATTACATTACATATAGT
GGATATCATATATTCAGTTAGTACAAATATTTCACGAAATGTCATATTACTAACGATTCA
AACTAGTTGACAGTTACAATTAATATTTACCATGATATAGATATTTATTACTAATTATCC
AAGAAATTTCACTAATAAATTTACTTTCGTCGAATTACCACTTCATGACGTCATCATTAT
CTACGTTTTAGTGTTTTACGCTTAAAAAACTGAGATTTATAGTTTTTTTTTGTCATACAT
TTGTTTTTGTGATTTTTGCATATCCTATTCTATTAGTTTAAAGCTTGAACTTACTTTTTA
TCATCTGAATAAATTTTGTGAGAAAATTAAGCGTCTTAACTGGGAACTAACTATAGGGGT
TAATGATCGTCAGTTGTTTATAACAATTTGTGTATTGTTTTTTAAATATAAATCTCAGTT
TTGTTGCAGCTACTTTTTTTTTACTATTACTGTGTTCGCTACATCTCTTCGGTGAGGCCA
TTGACGTATCCGCTGGCGGAGGGTCCGGGTTCGGTGCTGGTCGACTCTAAACTGCCGTAG
GTTGGACCCCGTCGCGACAACACTCGCCACCGCCCCCGGCGGTTGGTTATGCCGATATAG
CTGAGCATGACGGGCAGGAAGATGAGTCCGTGCGCTGCGCCGAACAGCACGATGCCGAGG
TACATACGGAAGTAGAACACCTGGAAGATCTGACTCTTGGCTGTGCCGAGTACGATGATG
CCGCCGAACTTCGTGAGCGTGATGCCGGAGAGCACGGACGTGCCCATCTTGGCGAGCGCC
TCGGAGGCGCGGTCGACCCTGCTGCCGCCGCCCGACACGCTGAAGCTGTGCACCAAGTGC
GAGCAGAACTCGACCGCTATGCCGACCGCCATCACCAAGTTAACGAGTGAGACGGCGTTC
AGGCTTATACCCCACCAGTACATGAGACCGCCGAGGTTCACCACTATCATGGTGATCGTC
ACCACCACCACCAGAGCCGAGAAGAGATCGAATCCCATAAGAACAAACGTCACTATGAAT
ATCGATAGCACCGATATCCCCATCGATTTCAACGTATCCGGCCACATAGTCAAGTACTGT
TCGTAGAACACGTAAAACACTGAATAGGGGAACACGTTCACTGTGAAGTTGTTTCCCGTC
TCCTTCAAGTTCATGTTGAGGGTCTCGGTGAGGTTGGCCGCCACGAGCCGAGCGGCTCGC
ATGGCAGAGTAGTAGTCGTGGCTGGTCTTCAGCACGCTGTGGTACCCCTGGTATGAGGTC
GCCGTCACCTTCGCCAGGGTACCGTTGCTGATGTAATTGACGGCGTGCCCGTAAGCCGGG
TGTCCGCCCTTCACGCACCCGCTGCTGGCCGAGGGGTTGTCTTGCAGGAAGTACGGGACG
TAACGCTGGAAGTCCTTCGCGCTGGGGCGACGCTCCGAGCCCACCAGTGGGATGTTACAG
AGCTCACACCCGTCAGATTTATCGCTGGGACAGAAACTGCTGTTCGATGGGAAGTATTTA
CAACAGGCCGGAATCGAAGCCCAGTCGAAGAAGTCGTCGAGCCAGGCGTTCGGCGGCTGC
GCTATGTACGTCTCCTTCGGTATCCGGTAAGCGGCGTATAGTTGCATGGCAACACTGTCC
GGGCGGCAGTACCGGGTGCCGCATATCATGTTCTGCGTCGCCGCGTCCGAGTAGTTGAGC
CCCTCGGTGATCACGAAGTACACGGGCGGCCCGATGTTCAGGTACCGCTGGAGGTACTTG
AAGTACTTCAGCTGGAAGCTGTCCTCCGGCATCGACAGCTCCTGGTCCAGCCCTATCTCG
ATGTGCGGCGCCACAGCGACTGATGAGCAGAGCCACGCGAAGAATATAATCATGACGGCG
GCTCTGACTTCCCGCTTCATGAGGAACGGCACGTAGATGTGCTTGAAGAGGTTGTAGAGG
GCGCCCTCGCCCAGCTCCTGCCCCCCCTCGGACTTCGTACCCTGGACGCAGCAGAACACG
TCGAACCTGTTGGCGTTCTGTCTATGCGTGTCTATGGCCAGTAGGGCCACGAAACACGTG
ATCTGGAGCAGGAAGTCGACCAGTAGAGCTGCGCCCGCGTAGAGTGCGAATGCACGTACA
GCCGGCATGTCGCTCAGCGCGCCCAGGAAGAAGCAAACAGACTCAGACACTGACGTCAGG
AACATCGAGGGGCCGACCTCACCCAACGTCCTGCCGATATGCTCGGCGACGGTCTCGTTG
GGCCGCCTGCCCTCGCGCTGGTTGGTCTGCACCAGGATGAAGATGTTGTCGACGCCGACG
GCGAGCACCAGGAACGGGATCACCTCGACTATGATGAGCGTCGCGGGTACGCCCGCGTAA
CCGAACACGCCCATCGAGCACACGACCGACGCCAGGACTATCATCACACCGCCGAGTCCC
AAGGTGACTTTGCTGTCGATCAGAAGTCTCGAGAAGCCGGTGAACCGTCCGAGCGAGATA
GCGATATACGCGAACATGATGAAGTACGAGACGAGTATAGTCGATACGTCCGACTGCGAC
TCCTTGTACAGCTCGTCCTCAATCGACCTCTCCGACGTGTAAGCGATGTCCATATACGAG
GGCATCTCGTTCTCCGTGTAGTTCTTCATGAACTCTATGTACTCCTTCTCCCACGCGAGG
GCCGGTTTCAACTGTTCCTTGTCGTGTTTGTTGTTGACGAGGAAGGTGAGTATGAGGGCC
GTGGCCTCGTGGAAGCGCGCGCTCTTAGTGAGCGGCTCGCCCGGCGCCAGGAACCCCCCC
AGCGCGACGGCTGGCAACACCGGCCCCCCGTAATCAGACAGGCAACCGGACGAGGTCGGG
CTCCTGGAGCAAGTGAGCACGGTGTCTAGATAAGAGTTATCATCGGTATAGAAATTGTTA
ACGTCGTTCTGCCACCAGCCCCATACAGTCTGCAGGGCGCACTCCTTGGCCTGGGTCGGG
CCACGGAAGGGGGACGAGAGTGGGGCGAAGCAGATATCCTGGATACCGGTCTCGTTGCCC
AGCGCCAGTATCCTGTTCTGCAGGTTCAAAACGTCCAGGAGGAAGGTGGAATTGAAGACC
GGACCGAAGGTTATGTTACCTGATGCTGTCTGATACTCTATATTCGGTAATCCTTTCGAC
GTTATTATAATCATTTCATTCCTATAGAAGGGTTCGAAGTGCGAGTCATAGTACTCCCGC
TCCTGACGCGAACGTGAGTTCGGCGACGCCCACAGCTCCACCGGGTCCGTGGTCAACTGC
GTCGACCTTATACCGATACCGAGGGCGGCCACCAGGCACAGACCCATAAACAAAACGATC
CAGGGTCTCGAGGCCATCATCTGTCCCCACCACTGGAAGAAATCTTCTAATCTGTTCTCA
GTCTCGGCACCGAGTCTCTCAAAGAATGTCACTTCGCTAACACCGTCCGCTTGGTCCATA
CTCCTTGATATTGCTGATGGGTTTATGGCCATTTCTTGGTTTGTTTCAGATGTTATACCG
TTATAATGTGAGTGATTTAGCAGTCGAGTGTACGTACTATCGCGATGGTGCAGCGGGCTT
GTCTCCGGGCAGGAACCGCGTTGTTCCGCGCGCGACCTTCCCTCACCCTGGTTGCAGCAG
AAGACGCCGCTGAGGAAGAGCGTGCTGAAGATGAGGAAGACGATGGTCATGATGGCGGCG
TAACCGTCCACCCCGAGCAGGGTGAACGGCGGCGGGGGCGGGGGCTGCGGGGGCGGCGCC
GCGCACGACGCCTCGCAATCCAAACACGAACACCCGGGTTGACCCGGCGGTCCGACATTG
CAAGGTCTAGTTGGGGGATTGGCGGGCGTGAACCCATCGATCGGTTCGTCGCCCCCCACG
TAGTTGATCTGGAAGGGCACGTAGGGAGAGCTCGCGTCGCCCATGAACGTGAACCAACGT
TCCGGCGTACACCCGACTGAACCATAATCGCCGCACATTAGATCCATCGCTAACTGATTC
GAAGATGGGTTTTGAACCTGTGCGCAGGAATTATATGTCGCCGATTTATATGTGTCGCTG
AGGTAATAATCTATCTCTTTGATCCGCTGATGTGTTTTATTAAATTGTTCAACAACGGTC
GGCTTCAAGAATGCACTCTGATTGGTGCCACAAGTCATCGTGCATATGTGCTTCATGAAG
TTGTCCATACACGTCGGGCATCTGAACAGTATGTTTACCGCTAGACCGATCGAGGATTTC
AGATTTTGAACCTGTTCGTGATTACAGCAAGACAGGGTACCGGCAGCGATTTCGGGGCAA
TACTCCTCTAGTATCGGCCGAGCAGAATCTTCAATGGGAAGGGCAGTGCCATTGTAAAAA
CAATTTACTTTCTTCGGTTCACTTGAGTTCCAGCATTCTCCGTACCATATGCAGTGACCC
TCATCTCCTGACGCTACTGGTATGTATACTGCTAAATGCAACAGCAGACAACCAAAGATC
GCGGGTAGAAATCGTCGCAAAAACCTTCCGTCGCCAGCCATTGTTCTCACTATATGAACA
CAAATTTTACTAATAATAATGTATTATCATATCACTAAATCACCCTATAAAGGCCCTTCA
AAAAGATCACAGAACTTGATCGGGCAATAAAATAAATAAAAGTCTGTCCGACGCACTTTC
ATGCCCGTTCGCTATGCACCGAATTACGGACAATGATTGACTGAAA
(4726 bp)

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