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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29701_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein_isoform_X2_[Papilio_polytes]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:0.66 TPM:0.66
ORF EntryO_SariMG12542_complete:A_SariMG_comp29701_c0_seq2
Sequence
(Nucleotide)
AATATAAATCTCAGTTTTGTGTTCGCTACATCTCTTCGGTGAGGCCATTGACGTATCCGC
TGGCGGAGGGTCCGGGTTCGGTGCTGGTCGACTCTAAACTGCCGTAGGTTGGACCCCGTC
GCGACAACACTCGCCACCGCCCCCGGCGGTTGGTTATGCCGATATAGCTGAGCATGACGG
GCAGGAAGATGAGTCCGTGCGCTGCGCCGAACAGCACGATGCCGAGGTACATACGGAAGT
AGAACACCTGGAAGATCTGACTCTTGGCTGTGCCGAGTACGATGATGCCGCCGAACTTCG
TGAGCGTGATGCCGGAGAGCACGGACGTGCCCATCTTGGCGAGCGCCTCGGAGGCGCGGT
CGACCCTGCTGCCGCCGCCCGACACGCTGAAGCTGTGCACCAAGTGCGAGCAGAACTCGA
CCGCTATGCCGACCGCCATCACCAAGTTAACGAGTGAGACGGCGTTCAGGCTTATACCCC
ACCAGTACATGAGACCGCCGAGGTTCACCACTATCATGGTGATCGTCACCACCACCACCA
GAGCCGAGAAGAGATCGAATCCCATAAGAACAAACGTCACTATGAATATCGATAGCACCG
ATATCCCCATCGATTTCAACGTATCCGGCCACATAGTCAAGTACTGTTCGTAGAACACGT
AAAACACTGAATAGGGGAACACGTTCACTGTGAAGTTGTTTCCCGTCTCCTTCAAGTTCA
TGTTGAGGGTCTCGGTGAGGTTGGCCGCCACGAGCCGAGCGGCTCGCATGGCAGAGTAGT
AGTCGTGGCTGGTCTTCAGCACGCTGTGGTACCCCTGGTATGAGGTCGCCGTCACCTTCG
CCAGGGTACCGTTGCTGATGTAATTGACGGCGTGCCCGTAAGCCGGGTGTCCGCCCTTCA
CGCACCCGCTGCTGGCCGAGGGGTTGTCTTGCAGGAAGTACGGGACGTAACGCTGGAAGT
CCTTCGCGCTGGGGCGACGCTCCGAGCCCACCAGTGGGATGTTACAGAGCTCACACCCGT
CAGATTTATCGCTGGGACAGAAACTGCTGTTCGATGGGAAGTATTTACAACAGGCCGGAA
TCGAAGCCCAGTCGAAGAAGTCGTCGAGCCAGGCGTTCGGCGGCTGCGCTATGTACGTCT
CCTTCGGTATCCGGTAAGCGGCGTATAGTTGCATGGCAACACTGTCCGGGCGGCAGTACC
GGGTGCCGCATATCATGTTCTGCGTCGCCGCGTCCGAGTAGTTGAGCCCCTCGGTGATCA
CGAAGTACACGGGCGGCCCGATGTTCAGGTACCGCTGGAGGTACTTGAAGTACTTCAGCT
GGAAGCTGTCCTCCGGCATCGACAGCTCCTGGTCCAGCCCTATCTCGATGTGCGGCGCCA
CAGCGACTGATGAGCAGAGCCACGCGAAGAATATAATCATGACGGCGGCTCTGACTTCCC
GCTTCATGAGGAACGGCACGTAGATGTGCTTGAAGAGGTTGTAGAGGGCGCCCTCGCCCA
GCTCCTGCCCCCCCTCGGACTTCGTACCCTGGACGCAGCAGAACACGTCGAACCTGTTGG
CGTTCTGTCTATGCGTGTCTATGGCCAGTAGGGCCACGAAACACGTGATCTGGAGCAGGA
AGTCGACCAGTAGAGCTGCGCCCGCGTAGAGTGCGAATGCACGTACAGCCGGCATGTCGC
TCAGCGCGCCCAGGAAGAAGCAAACAGACTCAGACACTGACGTCAGGAACATCGAGGGGC
CGACCTCACCCAACGTCCTGCCGATATGCTCGGCGACGGTCTCGTTGGGCCGCCTGCCCT
CGCGCTGGTTGGTCTGCACCAGGATGAAGATGTTGTCGACGCCGACGGCGAGCACCAGGA
ACGGGATCACCTCGACTATGATGAGCGTCGCGGGTACGCCCGCGTAACCGAACACGCCCA
TCGAGCACACGACCGACGCCAGGACTATCATCACACCGCCGAGTCCCAAGGTGACTTTGC
TGTCGATCAGAAGTCTCGAGAAGCCGGTGAACCGTCCGAGCGAGATAGCGATATACGCGA
ACATGATGAAGTACGAGACGAGTATAGTCGATACGTCCGACTGCGACTCCTTGTACAGCT
CGTCCTCAATCGACCTCTCCGACGTGTAAGCGATGTCCATATACGAGGGCATCTCGTTCT
CCGTGTAGTTCTTCATGAACTCTATGTACTCCTTCTCCCACGCGAGGGCCGGTTTCAACT
GTTCCTTGTCGTGTTTGTTGTTGACGAGGAAGGTGAGTATGAGGGCCGTGGCCTCGTGGA
AGCGCGCGCTCTTAGTGAGCGGCTCGCCCGGCGCCAGGAACCCCCCCAGCGCGACGGCTG
GCAACACCGGCCCCCCGTAATCAGACAGGCAACCGGACGAGGTCGGGCTCCTGGAGCAAG
TGAGCACGGTGTCTAGATAAGAGTTATCATCGGTATAGAAATTGTTAACGTCGTTCTGCC
ACCAGCCCCATACAGTCTGCAGGGCGCACTCCTTGGCCTGGGTCGGGCCACGGAAGGGGG
ACGAGAGTGGGGCGAAGCAGATATCCTGGATACCGGTCTCGTTGCCCAGCGCCAGTATCC
TGTTCTGCAGGTTCAAAACGTCCAGGAGGAAGGTGGAATTGAAGACCGGACCGAAGGTTA
TGTTACCTGATGCTGTCTGATACTCTATATTCGGTAATCCTTTCGACGTTATTATAATCA
TTTCATTCCTATAGAAGGGTTCGAAGTGCGAGTCATAGTACTCCCGCTCCTGACGCGAAC
GTGAGTTCGGCGACGCCCACAGCTCCACCGGGTCCGTGGTCAACTGCGTCGACCTTATAC
CGATACCGAGGGCGGCCACCAGGCACAGACCCATAAACAAAACGATCCAGGGTCTCGAGG
CCATCATCTGTCCCCACCACTGGAAGAAATCTTCTAATCTGTTCTCAGTCTCGGCACCGA
GTCTCTCAAAGAATGTCACTTCGCTAACACCGTCCGCTTGGTCCATACTCCTTGATATTG
CTGATGGGTTTATGGCCATTTCTTGGTTTGTTTCAGATGTTATACCGTTATAATGTGAGT
GATTTAGCAGTCGAGTGTACGTACTATCGCGATGGTGCAGCGGGCTTGTCTCCGGGCAGG
AACCGCGTTGTTCCGCGCGCGACCTTCCCTCACCCTGGTTGCAGCAGAAGACGCCGCTGA
GGAAGAGCGTGCTGAAGATGAGGAAGACGATGGTCATGATGGCGGCGTAACCGTCCACCC
CGAGCAGGGTGAACGGCGGCGGGGGCGGGGGCTGCGGGGGCGGCGCCGCGCACGACGCCT
CGCAATCCAAACACGAACACCCGGGTTGACCCGGCGGTCCGACATTGCAAGGTCTAGTTG
GGGGATTGGCGGGCGTGAACCCATCGATCGGTTCGTCGCCCCCCACGTAGTTGATCTGGA
AGGGCACGTAGGGAGAGCTCGCGTCGCCCATGAACGTGAACCAACGTTCCGGCGTACACC
CGACTGAACCATAATCGCCGCACATTAGATCCATCGCTAACTGATTCGAAGATGGGTTTT
GAACCTGTGCGCAGGAATTATATGTCGCCGATTTATATGTGTCGCTGAGGTAATAATCTA
TCTCTTTGATCCGCTGATGTGTTTTATTAAATTGTTCAACAACGGTCGGCTTCAAGAATG
CACTCTGATTGGTGCCACAAGTCATCGTGCATATGTGCTTCATGAAGTTGTCCATACACG
TCGGGCATCTGAACAGTATGTTTACCGCTAGACCGATCGAGGATTTCAGATTTTGAACCT
GTTCGTGATTACAGCAAGACAGGGTACCGGCAGCGATTTCGGGGCAATACTCCTCTAGTA
TCGGCCGAGCAGAATCTTCAATGGGAAGGGCAGTGCCATTGTAAAAACAATTTACTTTCT
TCGGTTCACTTGAGTTCCAGCATTCTCCGTACCATATGCAGTGACCCTCATCTCCTGACG
CTACTGGTATGTATACTGCTAAATGCAACAGCAGACAACCAAAGATCGCGGGTAGAAATC
GTCGCAAAAACCTTCCGTCGCCAGCCATTGTTCTCACTATATGAACACAAATTTTACTAA
TAATAATGTATTATCATATCACTAAATCACCCTATAAAGGCCCTTCAAAAAGATCACAGA
ACTTGATCGGGCAATAAAATAAATAAAAGTCTGTCCGACGCACTTTCATGCCCGTTCGCT
ATGCACCGAATTACGGACAATGATTGACTGAAA
(4233 bp)

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