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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29699_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Papilio_polytes]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0031119 P tRNA pseudouridine synthesis
Transcript
Level		FPKM:0.71 TPM:0.72
ORF EntryO_SariMG12517_complete:A_SariMG_comp29699_c0_seq4
Sequence
(Nucleotide)
AATAAATGGAACCAAAAAAAAAAGCTGTTTGGTCATAGCAAAACAACAACATATGCAAAC
TGGCGAAGCTTTGATAAAATTCTAAATCATGGAAAAAATCGCACCAAAACGTAAGAAAAT
ATCCAATTCAAACAGAGAAGAGCTATTAAAATTGGAGAAGGAGGATTTGATTGAAAAGAT
AATCCAACTGGAAGCACACAGGACACAATTGAAGAACATTATCAGTAAAAATACATCAAC
TGTGAATGTAAAATGTTCTGGAAAACAAAACAGACTTTTTGATTTTTCCAAACGTGTCTT
ACTTCATGTACTTTACTTCGGCTGGCACTACCAAGGTCTTGCAGTGCAAGAAGACACAAC
AGAGACCATCGAAGACCACTTGTTTGGAGCTCTTTTAAAATCATGTCTTATACAGAGCAG
AGAAACGTCACAGTACCACAGAAGTGGACGGACGGACAAAGGAGTTAGTTCTTTTGGTCA
GGTAATATCCATTACACTCCGGAGTAAACATTCACCTGACAACCAGGATTTGCCAGAGTC
AATCGCTTCCGAGATGCCTTATTGTAAAATATTGAACAGATTGCTCCCTAAGGATATAAG
AGTTGTTGCCTGGATGCCGATATCTGTCGATAAACCGGAGTTTAGTGCCAGATTTGACTG
TAAGAAACGCACATATAAATATTATTTCCCGCGTTCGAACCTCGATATATCCGGTATGAA
GTTCGCGTGCGCTCGCGTTTCCGGTTCCCGCGACTTCCGTAACCTTTGCAAGATGGACGT
CGGTAATGGCGTCACTAGTTTCGTTAGGGAAATATTTAGCGCGGATATCGTTCCCGTCGA
CGAGAATGACGTAGATAAGTCAACGTCCATGTACTGTCTGAGGATCGAAGGTAACGCGTT
CTTATGGCACCAGATCCGGTGCATCATGGCCGTTCTGCTACTCATTGGTGAAGGAAAAGA
GAGTCCTGATGTAATCACTGACTTACTCGATGTTGAGAAACATCCAAGGAAACCACAATA
CAATATGGCGCTTGACGTACCCCTGAATCTGTTTCATTGTGCGTACGAGATAGAAGATAC
AAACGAGTGGGTGCACGATAAGGACGAACTGAGGTCCGTTGTTGCTGGGTTGCAACATTA
TTGGACTCTGCACAGCATTAAAACAACAATGATTAAGGACAGTCTAGCTCAGCTCGAAAG
TAAGTATAAAGTTATTACGAGAGCGAGCGAGACGGAAGATCGGGACAATGACGAGAGCAA
GCGAGAGGGAGTGATGGCGCACGCGGACTGCCTTATGCAAGGAGTCAAACCGAAGACCTA
CACGCCTCTACTGAAGCGAGCGACCTGTTCAAGTCTAGAAGAAAAAATCGAGTATTACAA
GAAGAAACGGAAAATAGCAGACGTCAAAGAAGAAGAATGAGTTTATAAAATTTTTAATAT
TTGAAAATTTGTTTTTGTTACATGTATCATATATACATTCATATCTATT
(1489 bp)

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