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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29699_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Papilio_polytes]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0031119 P tRNA pseudouridine synthesis
Transcript
Level		FPKM:2.62 TPM:2.63
ORF EntryO_SariMG12516_complete:A_SariMG_comp29699_c0_seq2
Sequence
(Nucleotide)
AATAAATGGAACCAAAAAAAAAAGCTGTTTGGTCATAGCAAAACAACAACATATGCAAAC
TGGCGAAGCTTTGATAAAATTCTAAATCATGGAAAAAATCGCACCAAAACGTAAGAAAAT
ATCCAATTCAAACAGAGAAGAGCTATTAAAATTGGAGAAGGAGGATTTGATTGAAAAGAT
AATCCAACTGGAAGCACACAGGACACAATTGAAGAACATTATCAGTAAAAATACATCAAC
TGTGAATGTAAAATGTTCTGGAAAACAAAACAGACTTTTTGATTTTTCCAAATGTCATCA
TAGACGTGTCTTACTTCATGTACTTTACTTCGGCTGGCACTACCAAGGTCTTGCAGTGCA
AGAAGACACAACAGAGACCATCGAAGACCACTTGTTTGGAGCTCTTTTAAAATCATGTCT
TATACAGAGCAGAGAAACGTCACAGTACCACAGAAGTGGACGGACGGACAAAGGAGTTAG
TTCTTTTGGTCAGGTAATATCCATTACACTCCGGAGTAAACATTCACCTGACAACCAGGA
TTTGCCAGAGTCAATCGCTTCCGAGATGCCTTATTGTAAAATATTGAACAGATTGCTCCC
TAAGGATATAAGAGTTGTTGCCTGGATGCCGATATCTGTCGATAAACCGGAGTTTAGTGC
CAGATTTGACTGTAAGAAACGCACATATAAATATTATTTCCCGCGTTCGAACCTCGATAT
ATCCGGTATGAAGTTCGCGTGCGCTCGCGTTTCCGGTTCCCGCGACTTCCGTAACCTTTG
CAAGATGGACGTCGGTAATGGCGTCACTAGTTTCGTTAGGGAAATATTTAGCGCGGATAT
CGTTCCCGTCGACGAGAATGACGTAGATAAGTCAACGTCCATGTACTGTCTGAGGATCGA
AGGTAACGCGTTCTTATGGCACCAGATCCGGTGCATCATGGCCGTTCTGCTACTCATTGG
TGAAGGAAAAGAGAGTCCTGATGTAATCACTGACTTACTCGATGTTGAGAAACATCCAAG
GAAACCACAATACAATATGGCGCTTGACGTACCCCTGAATCTGTTTCATTGTGCGTACGA
GATAGAAGATACAAACGAGTGGGTGCACGATAAGGACGAACTGAGGTCCGTTGTTGCTGG
GTTGCAACATTATTGGACTCTGCACAGCATTAAAACAACAATGATTAAGGACAGTCTAGC
TCAGCTCGAAAGTAAGTATAAAGTTATTACGAGAGCGAGCGAGACGGAAGATCGGGACAA
TGACGAGAGCAAGCGAGAGGGAGTGATGGCGCACGCGGACTGCCTTATGCAAGGAGTCAA
ACCGAAGACCTACACGCCTCTACTGAAGCGAGCGACCTGTTCAAGTCTAGAAGAAAAAAT
CGAGTATTACAAGAAGAAACGGAAAATAGCAGACGTCAAAGAAGAAGAATGAGTTTATAA
AATTTTTAATATTTGAAAATTTGTTTTTGTTACATGTATCATATATACATTCATATCTAT
T
(1501 bp)

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