SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29699_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Plutella_xylostella]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0031119 P tRNA pseudouridine synthesis
Transcript
Level		FPKM:0.89 TPM:0.89
ORF EntryO_SariMG12515_complete:A_SariMG_comp29699_c0_seq1
Sequence
(Nucleotide)
GTTGAATCAATCAGAATTATGCCATTGCTCACGTAATTATTGGGGGCTTTACCTACTATT
ATTGAGAATAGGGGTTTCTCCAATATTGTTTTGGTTACAGATAAAAGTCTATTGTGTAAC
CATTTGTAGCATATATATTTAAAATGCGCGTGCTATAATTACAACATAAGTAACTGAAGT
CCAGACAAAGCCTTCTATTGATAAATGATGCAAGTTTTCAGGAAACCACAATACAATATG
GCGCTTGACGTACCCCTGAATCTGTTTCATTGTGCGTACGAGATAGAAGATACAAACGAG
TGGGTGCACGATAAGGACGAACTGAGGTCCGTTGTTGCTGGGTTGCAACATTATTGGACT
CTGCACAGCATTAAAACAACAATGATTAAGGACAGTCTAGCTCAGCTCGAAAGTAAGTAT
AAAGTTATTACGAGAGCGAGCGAGACGGAAGATCGGGACAATGACGAGAGCAAGCGAGAG
GGAGTGATGGCGCACGCGGACTGCCTTATGCAAGGAGTCAAACCGAAGACCTACACGCCT
CTACTGAAGCGAGCGACCTGTTCAAGTCTAGAAGAAAAAATCGAGTATTACAAGAAGAAA
CGGAAAATAGCAGACGTCAAAGAAGAAGAATGAGTTTATAAAATTTTTAATATTTGAAAA
TTTGTTTTTGTTACATGTATCATATATACATTCATATCTATT
(702 bp)

- SilkBase 1999-2023 -