SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29631_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		nuclear_excision_repair_protein_rad23_[Danaus_plexippus]
Ontology
GO:0000502 C proteasome complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000717 P nucleotide-excision repair, DNA duplex unwinding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0032434 P regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048568 P embryonic organ development
GO:0070911 P global genome nucleotide-excision repair
GO:0071942 C XPC complex
Transcript
Level		FPKM:2.49 TPM:2.50
ORF EntryO_SariMG12228_complete:A_SariMG_comp29631_c0_seq5
Sequence
(Nucleotide)
TAAATGTTTACTGCATAATTTTGTCGAGTCAGTATACTCAGTTGATAATTTAGGATAAAT
TTAGTGATTCATCGTCAATTTAAAAAAGTTACAAGAAAATGTTGGTTACTTTAAAAACAC
TTCAACAACAAACATTTCAAATTGAAATTGACTCGGAAGAAATCGTCAAAGCCCTCAAGC
TTAAAATTGAAGTCGAAAAGGGTAAAGATTACGCCGCCGACAATCAAAGGCTTATTTATG
CAGGAAAAATTTTACTGGATGACAACAAGTTAAGTTCATATAATATCGATGAAAAGAAAT
TTATTGTTATCATGGTAACAAAACCTAAAACAGCAGAAATGCAACAAAGTTCAACCTCTG
CAGCCGAAGCTGGTGAAAGTATTTCTACTGAGAGCGGCGACGCTAAAAATGAAGTTTCAG
CTGAAGTACCTAAAACTGCACCAACTACGGAATCAGAACCTGCTGTAGAGCCACCTGTGG
CATCTGGTGACCTTGACTTTGAATCGATTGTCCAAAGCATTATGGACATGGGATACAACA
GACTGCAAGTGGAACAGGCCTTACGTGCATCCTTTAATAACAGAGAAAGAGCTGTAGAGT
ATTTAATAACTGGTATTCCTGAAGAGTTTTTACAGGAACAGGAGGCTGAAGAAGGCTCTG
AAGAAGATCCTTTAGGATTTTTACGTGACCAGCCACAATTCCAACAAATGCGTGCTGTGA
TTCAACAGAACCCAAGTATGTTAAACTCTATACTACAACAAATTGGTCAAACTAATCCAG
CCTTGTTGCGAGTAATAAGTCAACATCAACAGGCTTTTGTTAGAATGCTTAATGAACCTA
TCAACCCTTCAGCTAGTGGAGTTACTGCAGAAGAGAATGCATTGGACACTTCACAGGCTC
AGCAGCCACAAAATGTTATTCAAGTCTCACCTCAAGATAAAGAAGCTATTGAGCGATTAA
AAGCACTGGGATTCCCTGAGCATATGGTTATACAAGCATACTTTGCATGTGAAAAAAATG
AAAATCTTGCAGCTAACTTCCTTTTGGCACAAAATTACGATGACTAAAGTTTAATATCTC
AATGTATCAAATTGGATAGACAAAATTTTTAAAAGAAAAAAATATTTAACATGGTGTTTT
AAGTTTTTATTTATAAAGTTTCTGCTTTTTTCTTACTCTAAATGTTTTATGTTATCTTAA
TTTTTCATAATTCAATGTGTTAAATTTTGTTTACTTTATTTTAAAACTGTATTTTTCATT
TGCCTTCTCCTGTATTTCGCATATATCATTCAAATTCTAAATTTTTTTAGTTGAAAATTG
CAGGATAATTTGTCTTCAGAGTATGGATTTTAATAAATACATTATAAATCTAGATACTTT
TGAGTATTTATTGTAAAAACCAATTTCCAGTGCTAAAATTGAATAAAAACTTTATCACTT
GAATGTTAAGTTTATTATTGTAAGAAAACTTCAATGTGTCTTTCTTACATTCATTTATAG
GTGGCTTAAATCTTCACATATTTCTGGAACATTTTTTTAAACACCAAATTATGGCAAATT
TGTCTTTAAGTTCTTAGACCTTAACTTCACTTTATTAAATGTTATCCATTTTTTTTAAAT
AACCTAAACTATCTTACATATTTGCAATATTTCGTAAGAAAATCTGGCAAGGATACACTA
CTATTTATTGTTAAATTTAATTTCAATTTTTACTCTCTAATAAAAATCTGGTCTTACCTA
GAAAAATATGTAGTTGCAAAACATAGACAAGTGATGGGGCTTTCAGTAAATAAGAAGACT
GTACTATTACATCAAACAGTTAATATTATTTATAAATAGCACTAAGTTAACATAAAGAAC
TATGTTGGTATAAACTTTATTCTTTCTAAATTTAAAGGCACTTTCCACAATGTTTATCAA
TAAATCTATGTCACTTGCCATGATTGATAATGTGCAACATAATATATATTAATAAAATCT
GTACATAGATAGATATATACCTGCATTTGGTATAAACTATTTATAACCATATTATCTAAT
AAATACACATTACATCAATCATGGTAAGTCAAATACATAAAATCTTACATTTAAATCTGG
TAGTCAACTAAATTACCCTTTCAGAGAACAGGTATACATACAATATAAATAACAGATATT
ACAGATAACAAGGGATGGTTCTAGTAATTGTCCTGCAGAGAATCAAAATACTCTCCATAC
ACTTGCACTTTTAAAAAATTAGTCAATATGAAGGTACAGGATAAAGATAGAACAAATATA
TATATAGTATATACATATATATACTAAATAAAAAGTACATAAGGTTCATTTCAAATTAAA
GTTCTGCTTTCCCATATTTAAAACCATTATACATATATAAAGTATATACAGAATACTATT
TTATACATTCTTTACATATTTATTCTCTGTTTATTTATACACAATGTACAAAAAATTAAT
TTCATTTAATTCATCCATAACATGTACGAGATAGAGATATTTTAGAACTGTACATTGCAA
TATGGCTATTGCACAAAATAACTAAAATATTAACTTTGGCTTATCCATTACAAACACCAG
TGTGGTGTTGAATATACTAGTCAACTTATATAGGGGTACTTTTATCACTTCAGCATCGTC
CATCACAGACTTGTGTGACATATAATTAGTATAATAACAAACTATTTGCAAAGGAAAAAA
TGGATTCCGGCAAGTTTCACAAAGCAAATATAATCAAAAATAAGAAAATTAAAGGTGTAA
CTCAAAATTATAATGCCATCCAAATTTGCTTTTCCCCTGTAATTTTGGAATGGTAAACAA
AATTGTATCTAACATAAATGTAATTAGTGAATCTATAAAACAAGAATATTGATTAAAAAC
AAAAATAACTCATATGGATATTTGACGTCTACAAGCACATATATTAAGTTAAATGATATT
AAACAATAACAGAAAATACCAAAACAGATTAACAATTATACATAATTATCAAAACTAACA
ATACTTTATGCAAACCAATTATTCTCGACATTCTTTTAATAAACAATTTGAACAATTCTG
CTTAAATTTAACATAAATCAATATAAGAATCTGTTACCGCCCTTGCACATAAGTACATTA
AATAGCATGTGCCGTTTGTTTTCAGTGTCCGGGCAGCGGCGTACCCACTTACCCAGCTGG
ACCTCATTCTGTTTTTTGTTGGCAGTATAATTCTTTCAAAGATTTTAATTCTTCTATAAG
TGCTTTATTTTGATTTTCAAGGACGGCAACTCTATTCTCCAGGCATTTGATATATTCCTT
TTTCTTGCGACGGCATTCTCTTGCCGCCTCGCGGTTCTTTAATAATCGTAATTCACGTTT
CCGCGTTTGATCTTCTAACATGGGTCCAGGCACATAAAACTGAGCATCTTGGTTCGTCGC
ATATTGAACGATTGCACCACCTCCGGCACCTCCCGATACGGCTAACGTGTGAAGCCCGCT
CTCTGTCTGTAATGCTCCAGCTGGAATAACTGGTGCAAATGACAAAGAAGATGACAGCGA
CACTTCAGTCTCACATCCTGGTTTAGACCCCATGCGATTGTCTGCAATTTCTGCTCCTCC
AAGGTCATTGAGAATTTTTCGATAAGATGGTCTTCTTGTTAGCATTTCTCTATATTTCCG
TTTTGGACTTTCATCATCACTACAGCTATCATCACTACATGATTGTCCTTGAGTATTTAG
AACAGAGTTTGGTTCTGGTTTTATCTGTAATGTTTGAAGTGTTCCTTGAGTGGTGTGTAT
AACAGAACTTGGTTTACTGACAAGTATAACATTTCCCTTTGGTATCTGCACTGATTGTAT
ATTTGATGCCGTTTGTATAACTGATTGTTGATTGGGTTGTATAACAGATTGCACCTGTGC
AGAGGGAGCTTGTGCTGGTAATGTGAGCTGCACAATGCTAGTGACGGCAACGACGTGAGC
AGCTGCACCACTCGCGGAGGAGCCCGCACTCGCCAGTGACTCTGCCGAACCAGCACCGCC
AACGGTACCGTTCTCTTCGACCATTCCTTCCATTCCCACTAAGGTCACCTAAAATTCAAG
GTCAACTGTCTGTGCATTCCTTGTTCTTCCGATATGCTCAATGAGGGAAATGCTTGGTTA
TAACATTATCTGGCTCCCTTACGATGACACTTCACAGGAAAACCATTATTTGTGAATCCA
AATATACACGACCGTGACAGGTCGCAAGTTTTG
(4233 bp)

- SilkBase 1999-2023 -