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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29608_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_Collagen_alpha-1(XI)_chain_[Operophtera_brumata]
Ontology
GO:0001501 P skeletal system development
GO:0001894 P tissue homeostasis
GO:0002062 P chondrocyte differentiation
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0007605 P sensory perception of sound
GO:0030199 P collagen fibril organization
GO:0046872 F metal ion binding
GO:0048705 P skeletal system morphogenesis
GO:0051216 P cartilage development
GO:0060021 P roof of mouth development
GO:0060023 P soft palate development
Transcript
Level		FPKM:1.06 TPM:1.06
ORF EntryO_SariMG12120_internal:A_SariMG_comp29608_c1_seq1
Sequence
(Nucleotide)
ATCTCCTGCAGGTCCATCTTGACCTGGAGCCCCTGGCTCTCCTTGTAATCCTGGGGTTCC
ACGTTCTCCTTTGTCTCCAGGCATACCGGGAATACCTGGATAACCTTGATCGCCTTTAGG
GCCAATCACTCCTGTTAATCCCCTTTCCCCGTCTCTACCCGCATGTCCTCGTCTACCTTG
ACGGCCTGATAGACCTTGCAATCCCCTGGGTCCTGGAGGTCCAGGCTCACCCGGATCTCC
TTGTTCTCCTTTAGGACCTTCTGAACCTACTTCACCTTCAGGTCCCGCTGGACCAGTTAG
ACCCATAGGTCCCTCAGCACCACGCATTGCAGCCATGTGCTGAGTTAACATTTGGCGGAG
TGCTTCTGATTGCGCGTCAGGCCCTTTCTCGTTACCTGATTGCTGCAAAGGAACAACAAA
GACGTGCCCGGGCGGTCCTGGGAATCCTTGCTGTCCTTCCGATCCAGATTTCCCAGGTTC
TCCTTTCGGACCTCTAGGTCCTTGAGGTCCCGGTGGACCTGGATATCCGCGGGGACCCGT
ATAGGTACTTGAACCGCCATAATCGTAATAAGTCTCAGATGAATCATACGATGAAGAGTT
TCCGTAGAACTGAGGTGGGTGCGTAAGCCAATCTGAGTCTTCAGTCGTTGTCATAGGTGT
GTACGAAGCTTCTGTAGTGGAAAGAGTTATCTGAGTCTCTCCATTGTCATCTCGCGTAAC
CCGTGTTATATCTCTGTCGGTGGATGACTCTAAGCTCTGTGCTGGTGTATTTTCGACCGT
CTCTGGAGTCGGTCTCAGGAATTCATTGTCGTCTGTGAAACTGCCGAAGATGCTATTTTC
GTCAGAATCAGTTGAAGTTAGATATTGTTCAGCATAACCGCTAGAATACGTTGTGATTTG
CCAATTTGGTCTAACTGTTGAGAGTTCTCTACCAGCGAAGGCCCACAAATTGTTAGTCTG
ATTCAAATCTGGGAATCGGCGTATTCCTATATTTACATTTTCAGGGTTCTCGCTGATCAC
TACTGGTGTAGTAGACCTTTGTGTTGTAGTAGTATTTTCGTTGGATATAATATTATGATC
TTTATTTTCTTGATATATGTTCGATGACCCTCCTAAGACGTATCCAGATCCACCACAATC
TGGTGCAATTGAATGACAAAACTCGTACGCAGTATCGGGTTTATTAGAGAAGTATAGTAA
(1200 bp)

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