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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29574_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:2.59 TPM:2.60
ORF EntryO_SariMG12018_5prime_partial:A_SariMG_comp29574_c0_seq2
Sequence
(Nucleotide)
TTACACCAAATGATGAATCGCCGCCCAAGAAGAAAGCAAAGATGGAGAGTTCGATGACAT
TCGGTCGGTACAACAGCGGGACTGCTTCTAATAAAAACTTCTCGCCTGAGATTTTCAAGG
GTCCTTTAAAATTATTCGCCGGCGGTGACCACAGTTTCTTGATAATCTGCATTGATAAAA
TAGCATCAGTCGATTTCCGAACCCCGGACCAGAAGAAGCAGATACTAACATTAACGTTAC
CTAAATTGGCCACTTGTGAAGTGTTTAAAGACAATGATGTTGTAAATCAGGACTTAATGG
CGTATTTGGAGACAGTTTTCGGTTCACTTGCTTGTGTAAACGCTTCGTTCCTACAACCGA
ATAACGTCCACTTTGGATGCAACACTAAAGTACCGGGCGTCGATCTCAAGAAAGCTGAAG
AGGCTTTTACACTTGTTAGCAGATTTGAAAACACTTCCATTAAGGAACTTATATTTAGTC
ATTTAACGGAGAATATTATAAAGAAGATGAAAGTGTCGCCGCCCGATGCGGAAGCGCTAC
GAATGTTCCTCATTCTTCCTTTGTACCATGAAATGAGGAATCCGCGGCGACATCCCGAGT
TACAGGGTCCATTTGCAGAAGCGTTCAACAATTTATCAGCGCACCCTCAGAAGATAGTGA
ACATTTGGTGGGAAGCTCAAAGCTCCGAATATTTTGAAATGCTAGTCGATATATTTAAAA
GCGTTATTGTGTATGAGCTAATGCAGCCCGTAGTAAGAGCTAACAGGAAAATATATTTCT
CACATAGTATAATTCAGATATTGAACACGTTGGCGTCGTTGAACAAAATCAATTTTAATA
ATCCAAAGAAGCCTAAAATACAAGCGGAATGCTTCTATATAGAGGACCTTTGTAATTATG
TGGATATTGCGACGGATTATATTAACTGGTTGTCAGATCAAAATTCAAGTCAGCCGCACA
TGTGCAACTATGCGTTTCTATTCGACGTCCAGTGCAAGTCTCTATTGTTAAAAATAGACC
AACAGTTACAAATGCAGATAGCAATAAGCCGAGCTGCGACTCAGATATTCACCAGGCTGT
TTATGGATCCCTCGTACGAGTACCAGAGAGATCAGTTCCTGAATCTAACTGTATCCAGGA
ATCACATCGTTCGAGACACTATGACTCAGATCAGTAATCACGACACGTCCCAACTTAAGA
AACCTCTTAGGGTTGAATTTTTGGGAGAAGAAGCCGAAGACGCTGGTGGTGTAAAGAAAG
AATTCTTTCTACTACTACTGAAGGAAATATTCGATCCTGTATACGGGATGTTCAAACAGT
CTGAAGATACTAATATGATTTGGTTCTCCAATAACCCCTTTGAGGATGATGTTATGTACT
ATTTAATTGGTGCAATCTACGGCCTAGCTATATATAATTCTATTATAATCTATGTACCGT
TTCCGCTGGTACTGTATAAGAAATTACTGGGTGAAGTGGTTATGTTGGATGATTTATCTG
ATTTAAGTCCGACGCTTGCGAATAGTCTGAAAAGCCTATTGGATTACCCGGATGACAATG
TTGAAGAAGTATTCGGTTTATGTTTCGCTGTGAACACTGAGGTGTTCGATCAGATCCAAG
TGCACCCGCTGAAAGAGGACGGTGTAAATTTGCCCGTTACCCAAGAGAACAAAGCAGAAT
ATGTAGAGCTGTACGTCGATTTCTTGCTCAATAAATCCGTCGAGAATCAGTTCAAAGCGT
TTAATCAGGGATTTCAAAAGGTATGCGGCGGTAGAATAATTAAATTGTTTAGATCCCACG
AACTAATGTCCGTCGTCATCGGAAACGAAGAATACGATTGGGACGTATTCGAAAGTAATT
GCGAATATAAAAATGGTTATTCAGCAAATGACCAACAAATCAGATGGTTTTGGGAAATAT
TTCGTGAGATCTCAATAGAAGACAAGAAGAAGTTCCTATTGTTTTTGACTGGAAGCGACC
GCGTGCCCATACAGGGCATGAAGGATGTCAAGATACGAATTCAGCCAGTTGCCGACGATA
GGTTCTTTCCGGTCGCTCATACGTGTTTCAATCTGTTAGACTTGCCTCGGTATAAAACTA
AAGAGCGGCTCAAATATTACCTCCTGCAAGCGATACAACAGACGCAGGGTTTCTCACTCG
TATGAGTGAGATATGAATAATAAATAAATAAATGTTATATAATAAATAATGTATCATCAA
TATTGTGGTTCTTGTTCCCGTAAACCTGTTGTTTAGTTTGTTGTATTGCGCGTTCACGAC
TGAATTTATATAAGGGGTCAGTAGGCGAGGTGCCTAAATGTAACGGCCTCAAAACTAGTC
TTAAATTGATTCAAACGCGTGTGTATTTAAAGCCCTTTTTTATCTGTTGACTTTTTGTTG
TTTGTTTTGACAAAATTAAAAACGCATCAAATAATTATAAACATTATTGGCAATTGATTG
ATATTTTTATATAAAAAAAATATTGAGTTTTCAGATGACATTATACATACCCTTCCAGGT
AAAATCAAAATTAAAAAAAAAAATACCTTTGAAATTAACAGACTTATAAATATTAAAA
(2578 bp)

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