SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29571_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_exostosin-3_isoform_X1_[Papilio_machaon]
Ontology
GO:0000139 C Golgi membrane
GO:0001888 F glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008101 P BMP signaling pathway
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030201 P heparan sulfate proteoglycan metabolic process
GO:0030210 P heparin biosynthetic process
GO:0042328 F heparan sulfate N-acetylglucosaminyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.45 TPM:0.45
ORF EntryO_SariMG12008_complete:A_SariMG_comp29571_c1_seq2
Sequence
(Nucleotide)
CTAAGTACCTATTTAATAACTCACCTGAGAAAAGTACTGTATACATTTATGTCTCTCGTG
GAAATGTGTCTCGTCGGCAGAGAGAGTGACCGGACATCCGGGGCAGCGGAATGTCCACCG
TGACGTCACCTTAACGGGAGGTTTCCTAGTGATGTGAGCTACGAGGAAGTTCATAGCAAT
GTCTTCGCAGTTCATATATTCGTCGACGTAGTCTCGTATAGCGGCGGGCAGAGTGCGCCA
GTACGCCCACAAATAGTATCGATGGACGAACGCAGCGCCAGTCAACACCATACTCAGTTC
ACAGCTGTAGTTAGAATTGTAAAGGAAGCCATTGTTAAAATTAAGATCCCACGCGTGATA
TCGACCGGGAAAACCGACAATACGATCGCGATGTTCTCGCCAGACTCTGAATGCGAACAC
AATCTCATCGTGCCTCAAATGTGCATCGTCATCGACGCACAAGACGGCTTCGGTCTCGAT
CAGGTTGTAAGGGAGAAAACGATTATTAAGGGAATTCCTTGCGGTTCTAACGACAGCGAC
AGGCGCACCGCTTTCAGGCCACGAGCTCACAGCACTAGGGGAAGACGGTCCGTTCCACAC
CACTACAACCTTGTTCAAGTACGGTAAAGCTCGCAATCGAGCTAAGGCCGCCGCCAACAC
CGCTTCCCGTTCATAAGTGAGAATAACAACCGTGAACTGCTCCCGTGGTCTGTCGCCGCC
GAGCGCTTCGCTGAACTCTCTACCGGAACCCCCGGCACCGGCGCCGACGGGCCGGAAGCC
CGCCGCCGACCCTAAGAACCGCGCTTCGGAACTCACAACGGGATCCCATGGCAACTGCGG
GTACAGAGCGAATGGGTCGCCCCATTCGTTCCAGAGTTCGTACCCGTGCACCAGTCCCGC
GGAATAGTTCCTCCGGTACGCGGGGCTAGGATAAGGTGCCTCGAGCGGACCTAGCGTCTC
TTCCGGTTCTGCGTCGACGGCAGGCGGTTCGATCCGCGGCGGGTAGTATGAATCGTTGAA
AGCCGGAGCGCCTATAGTCGGCATCGCGGGTCTTGCGGGAATATGCAGCCGTGTTCGTAT
AATCGCCAGCAAGGTATCCACGCTGGCCTGTACGGAGCTCAGGTACCGTTCCCAGAGTAC
ACGGCCTTGTCTTCTAAACGTGATGAGATCGGCGTCGGTAAAGGCTCGCATAAAGAAGTG
CATTTCGGTAACGCGCGCTCGTGGTAGAGAGAGCACCGCCCGTCGCCAGTCGAGCACTTC
ACTATATGGTAAACGTGTTCTATCCCCTCCAAGAATAACTGGGATCGCTCCTGATCTAAG
CGCTTCGTAGATTCTCGCTTGTAAAAGCGCCGTAGTAACATATGCGCGATCGGCCGGTGC
TAGTATCAAGACGAACGTAGAATCGCGTAAGACCGCTCTCCGGGACCTGTCTGTGCCGCA
CAGTGCCCAGTCTCCTATAGGTACCGTCGCACGCTTCTCAACCGGTGGATCGCATTCAAA
CTGTAGCAAAAACAAATCAGAAGCAGGTGCAGAACTTGCCATTTTCTCTAGTACCTCTAT
AAGCGATTTATCTTGTTCTTTGTCAGGGCCATTCGATGGAAACTGCGAACCCTTAGAAGA
TACTTTCTCCTTGCCGGTGCTATAGGTGCGCAGTCAGCCCAAACGTCGCCTCCAGGAGGA
CCCAATGCTGGTGGAATAATCACATCAAAATCTTGCCGAAACTGATCTTGAGTGAAAGTT
GACTGCACAACCATAGCTCTGCCAGTGGAAGCCCCCCTGAACGCATCTCCAGATCCGACA
GACAATTCTCGTCGCGCCAAGTTCAACAAAACATGATTTCGACCATCGCCACCCCAAAAA
GGTAAACTTTTTACAGCTGTCTCGTTTAACAATAATTTATACGAATCAGTTGTTGACGAG
AAACCTTTATCCAAAGGAAATGCCTCACCGACGATAACGAGATAAATACATGCTTCGTTG
GGATCGCGGGTAAAGTGCGCATTGTAACCTAGAGTCTGTCGTAAAGTAGTTTTCAGAAAT
CCATCGACCTCTGCCCCAGCTAACGGAACGTATATGTCAGGATCGTACAGATAAACGGGA
AAACCTGAAGTTAAAGAGCAACGCGAATAATCGAAACAAGAAAACATGCGGCAATTTACT
TCTAGGGAGGAACTCACTGGAGGTAGGATAGGCGGGGGCCTGGAAGGAAGTATCTGGACC
GGAGGAGCGAGTTCAGGTGAATCCCTACGAATGGCTTCTAACTGGGCTAGACGAGCTTGG
TCAGCTGAAACGCGTAGACGTTGCAATTCTGCAGCCGCGCGGACGTACTCGACTTTTGCA
CTATCAGCTTTGGCACTCGCTGCAGCTGCCTCACGTTGTAATCGTCCCCGCTTTGCCTCC
AATTCTCG
(2408 bp)

- SilkBase 1999-2023 -