SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29550_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_FF38_05870_[Lucilia_cuprina]
Ontology
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005247 F voltage-gated chloride channel activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0012506 C vesicle membrane
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030165 F PDZ domain binding
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1903959 P regulation of anion transmembrane transport
Transcript
Level		FPKM:0.96 TPM:0.96
ORF EntryO_SariMG11944_5prime_partial:A_SariMG_comp29550_c0_seq2
Sequence
(Nucleotide)
CACGACGGAGATAAATTGCAACGACCGGGAGTCTCTAATAGGTGGTCCTGTAGGGGAATC
GGTCGTATTTTCCGGAATGCAGGGTGATGATGATATCCCAGGAATTGGTCAATATGAAGA
CTTTCATACTATTGATTGGCAAAGAGACATTGCACGTGATCGTATGCATCACAGATACAT
AGTCAAGAAAAGACAGGACTCAATATGGGATTTAATAAAGAGTGCTCATGATGCATGGTC
AGGATGGGTTTGTGTTCTATTAGTGGGTATAGCTACGGGCATAGTTGCAGGTGTTATTGA
TATTGGAGCTTCATGGATGACTGACCTTAAGTTTGGTATTTGTCCTGCAGCCTTTTGGTT
CAATAGAGAACAATGTTGTTGGTCAGATACAAATACTACTTTTGATAGTGGGAATTGTTC
CCAGTGGTTGACATGGCCTCAAGTTTTTGGCGACTATGGAGAAGGAGCTGGTGCTTACAT
TATAAGCTATCTCTTCTACATAGTGTGGGCTTTGCTGTTTGCTGCACTTTCAGCTTCACT
AGTTCGCATGTTTGCGCCCTATGCTTGTGGATCTGGTATTCCTGAAATCAAAACAATATT
GAGTGGTTTTATTATCAGAGGATATTTGGGTAAATGGACACTCATTATCAAAGTGGTGGG
ATTGATCCTGTCAGTATCTTCAGGATTATCACTGGGGAAGGAAGGCCCTATGGTTCACAT
AGCCAGTTGCATAGGTAACATCTTATCATACTTGTTTCCAAAGTATGGTCGAAATGAGGC
AAAGAAGCGTGAAATACTTTCGGCGGCAGCTGCCGCCGGAGTCTCTGTAGCATTTGGAGC
CCCGATCGGTGGAGTACTCTTTAGTTTAGAAGAGGTTTCCTATTACTTCCCATTGAAGAC
TCTATGGCGTTCATTTTTCTGCGCTCTGATAGCTGCTTTCATTTTGCGTTCAATAAACCC
GTTCGGTAACGAGCACTCTGTTCTGTTCTTCGTAGAGTACAACAAACCGTGGATATTCTT
CGAGCTGATACCTTTTGTTGGTCTTGGAATCATTGGGGGCTGTATAGCTACCATATTTAT
AAAAGCCAATATATTCTGGTGCCGTTACCGTAAATATTCGAAATTGGGACAGTATCCTGT
AACTGAAGTCCTGGTTGTAACCCTTATTACGGCCATCATAGCATATCCGAATCCGTATAC
ACGTATGAATACTAGTGAACTCATATACTTGCTGTTCAATCAGTGCGGAATATCTAACTC
GGATCCTCTGTGTGATTATAATCGCAATTTCACCGATGCAAATTCGGCTATAGAGAAGGC
AGCTGCCGGTGAAGGGGTTCATCGTGCTATTTGGTTGTTGGTCCTGGCCCTTATATTAAA
GTTGGTTATGACCATATTCACATTCGGTATTAAAGTGCCCTGTGGGTTATTCATACCTAG
TCTTGCATTGGGAGCAATTGCTGGCAGAATTGTTGGCATTGGTGTGGAACAGCTAGCGTA
TCATTATCCGAAGATATGGTTATTCATACCTAGTCTTGCATTGGGAGCAATTGCTGGCAG
AATTGTTGGCATTGGTGTGGAACAGCTAGCGTATCATTATCCGAAGATATGGTTATTCTC
TGGAGAGTGTTCGACAGGCGATGATTGTATAACTCCAGGCTTGTATGCTATGGTAGGTGC
AGCCGCAGTCCTTGGAGGTGTCACTAGAATGACCGTGTCTCTTGTGGTGATAATGTTTGA
GCTGACTGGCGGTGTACGGTACATTGTGCCTTTGATGGCGGCTGCCATGGCATCAAAATG
GGTCGGAGATGCCCTCGGCCGCCAGGGTATATATGATGCCCACATCGCATTGAATGGATA
TCCATTCTTAGATAGCAAGGACGAATTCCAGCATACATCTCTCGCTGCCGATGTTATGCA
ACCAAAGCGAAACGAGACGTTGTCAGTTATAACCCAAGACTCCATGACCGTGGATGATGT
GGAGACATTACTCAAAGAAACTGAACACAATGGTTACCCGGTAGTTGTGTCTAAAGAGTC
TCAGTATCTCGTTGGATTTGTACTGCGCAGGGATCTCAACCTCGCTATAGCAAATGCCCG
ACGCACTATTGAGGGTATTACTGGGCAATCGGTAGTGATATTTGCTGGGTCTGTAAACCC
ACCGCTGGGACCTCCGCCGTGTCTTCATCTTAATCGTATTCTGGACATGGCACCAATCAC
TGTCACCGATCAGACCCCTATGGAAACTGTCGTGGACATGTTCAGGAAACTCGGCTTACG
ACAGACACTTGTTACACACAATGGGCGACTTCTCGGCGTGATCACTAAAAAGGATGTTCT
TCGTCATGTAAAACAAATGGATAACGAAGATCCCAACTCTGTACTGTTTAATTAAAATAC
TGAAGTCCTATTAACTATTCGTATATTTAAAAATCCACAACAGATGTATAACCGCGAGTC
TAAATATATATTTCACTATATAATCACATTATTGTCGCTGGTCCGGATCGCGTACGTTAT
TATTAACTAAATATGGTGGCTTTCTATGATGAAAAACTTCCAAAAATTTCAATTTTCAAA
TTATCATCATTATAAGAAACAACTTTTTCTACCGTACGAGTTTTGTTTATAATTGATTAA
ACATTCAAATCAATCCAAAACCCTGTCAATAATTGGTATTTTTTTTATGTTATTTAAAGA
AACAGTACACTGTGTATAATTAAGTGTAAGTTAA
(2734 bp)

- SilkBase 1999-2023 -