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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29534_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cold_shock_domain-containing_protein_E1_[Amyelois_transitella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
Transcript
Level		FPKM:0.83 TPM:0.83
ORF EntryO_SariMG11909_3prime_partial:A_SariMG_comp29534_c0_seq3
Sequence
(Nucleotide)
GTCAGTGCTATGCTGTGTCGTGGTGAGGTTTGATAATTTTATTGTTTCGTATTTATTTGC
CTATCATTAGATTAGTATTCCGTCAGTACAAATTTCGAATATTATAAAGCCTGTGGGCGT
AATGATATTTGCCTTAATGGAAGTATCGTGAAGAGATATCAGTCGTTGGTGGTCGGTGTA
ATTTGTGCTGGTCGGCCTATTGGGCGGCCGATATCTATCTACATAGCAATATTAAAATGT
AGAACGATGTTCGGACGCGACGTTTGGTTATAATCCGGCGTTATTGTGACCATTGAACAT
CGGGTTCGTGTGCATTTTCTAATAGGATTGGATATATACGTAGCTAAATAAGCGTGTCTG
TTGCAGTTTGTGAATATCGGCTTAGAGAAGTATAGATAGCAATACAATTATACGATTATC
TAAAACCGAGCCAGTACACCACGAAGCTTTGACTCAGCAAGCATTGAAGACATCTGAGGA
TTTAGCTTAACATTATCAAAAGTAGTGTAATTTGCAATAATAGTGATTTTTGTGTTTAAA
TTGTGACTGTCGCGTTATTTAATTTCGGCGAGTTTGCGTAAAATCAGAAAAAGAAAATGT
GATTACATTATAAAATTTGTAACAAATATTTAAAAAAACATAAATACCATACAATTTACT
GTGATATATTGATAAAAATACTGAAATTTCGACTAATATACAAAGAAGAGCTAAAAAATG
TCCAGTAATCCTCAGTGGAAAATGTTCCAGCCGCCAGATTCACACTCTTCTCCCTTGCAA
GACATTTTAGATCTCCAACACTCTAATATGCAGGCCAAATCCTCTTATAGGAATGGCACC
TACAGTAGTGAGTACCCTAGCTCTCCCAGGGATAATTATAACAGTTCTAAATCGGGTAGT
GGAAATCGTTTCTCGATTGGTTATAATTTAGACACTTGCCCCGTGGGAGACACAATGTAC
TCTTCTAGTTCATCTAATAACACAACGCAGTATGATTCTATGAATCACCCACCTATTAGA
GAGACGGGTATTATTGAGAAGCTGCTACACTCTTATGGATTTATTCAGTGCTGTGAGAGG
CAAGCAAGGCTCTTTTTCCATTTTAGTCAGTTCAGTGGCAATACTGAACATCTTAAAATA
GGAGATCCAGTTGAATTCTGTATGGCTTATGATCGTCGTACTGGAAAGCCAATAGCCTCC
ACTGTTACGAAAATTGCACCGGAAGTGGTGCTGAGTGAAGCAAGAGTAACTGGTACAGTA
ACTACAGAAGTTAAAGGCGAAGGATCTGGAGATAGTACAGGAAGAATTTCATATGAGAAT
CGGGGTGAATGTTTCTTCTTGCCTTACACTAAAGATGATGTTGAGGGCAATGTAATTTTG
CATACAGGTGATGCTGTTAGCTTTCAGATAGCCACAAATCAGAGAGGAACTTTGGGTGCT
TGTCATATACGTTTTGAAAATCCATCACACCCAGTGAAATACCATGGTGTTATCTGCTCT
ATGAAAGAACATTTTGGTTTTATTGAGAGGGCTGACGTTGTAAAAGAAATATTCTTTCAC
TATTCTGAAGCTAAATGTAAAGAAAAGTTGACTCTTGGTGATGATGTAGAATTTAACATT
CATACCAGAAATGGCAAAGAAGTTGCTTGCAATATCAGCAAACTGCCAAGCGGGTCGGTA
GTTTTCGAAGATGTCAGCCCTGAAGTAATGCGAGGGCAAGTGTTGAAACCGTTGGAACGT
GGTAATATGGTCCGAGCAGTTCAAAACGATCCACTGCCCGGCCGACTCAGATACCGTGCG
GCTGATCATTCTGAAGTTGAGGTGCCATTTGGCGATAAAGATCAATGTGGCGAGTTTACT
CTACGCCATGGAGATTGGGTGCAATTTCAAGTGGCAACTGATAGGAGAGATCAGCTTAAA
CGTGCCACCAATATATCTCTGTGGGATGAGTCTTTTAATGTATCAGGAGAACGACGGGAA
CAGGGGATTGTCTGTTCGTTGCGAGAAGGTTACGGATTCATCCGTTGCGTCGAGAGAGAA
CAAACAATGTTCTTTCACTTCGCCGAAGTTCTCCGCTTGGGACAAGAACTTAGTGTCGGA
GATGAGGTGGAATTCACGGTGGACCCAGGGACAACATTTGCTAATTTAAACACACGTCAG
TTTGCTATTCGCATAAAACACTTGCCCGTTGGTACAGTGCTATTTGAAACGCTGATCGAG
CGAAGCGTACGTGGCGTTATCGCTAAGGAAGTCCAATTATTTACATCTTCATTAAGCCCG
GTCCGATCGGGATCCATTGACACAAACGGTCTGATTAATTGCGTAATTAATCAGACGAAG
AAAACGGTACCGTTTGTCGCTAAGAATGTCGAATCTAAAATGCAGCCACGGGTCGGGGAC
AAGGTTATCTTTGACCTGTATCAGGTGAAACGTACTAAAGAGTTGGTGGCAATGGCAGTG
CAAATTCAGCACAACCTTACCAATAATGGGAACGGTAGTAGCAGCGGCGCAGCTTCGAAC
AGTCGCGCCGTCATGCATGGTTTCATTGCCGCCCTGAAAGACGGTTTCGGCTTCATAGAG
GCATCTAACCACACTAAGGAAGTCTTCTTCCATTTCAGCAATCTTGAAGGCAGCCCCGAC
TCCCTGGAATTGGGCTGTGAAGTGGAGTATACATTGGGGCGTATTATTAGCTCCGGTGGT
GGGTGTGCTAGCGCTGAATTCGTACGGCCTTTGTCGCGTGGCACAATACCGATAGCAAAA
CCGTTGGAACCAACA
(2775 bp)

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