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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29534_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cold_shock_domain-containing_protein_E1_isoform_X2_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0008584 P male gonad development
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
Transcript
Level		FPKM:8.37 TPM:8.39
ORF EntryO_SariMG11907_5prime_partial:A_SariMG_comp29534_c0_seq2
Sequence
(Nucleotide)
GTGAGATTTGATTGTCGTAATATTTTAACATTTGAATGCATAGAAATGTAATTTAAAAAG
TAACCTAAAATAAACGCATTTGTTCACATCTTAGTATAAAAATGTATCTAATAATAATAA
TAGGTAAAGTAATATTGAACCAAACAATAGAATATAGTACGTTTGTTAGGAATCTGTTAC
AACTGCCGTTTAAACCCTACCGAACTTGACAAACCACATATTACCATTCACTTAAATATT
TATATATATATGACAACTCAAACGGAATTTTGAACAACGTATATCTATGCGTAAAAGAAC
CTCTACTTCTTCATAAACTCAAAACAAACAAACAAACAAAAAAAAAAAAAACAAAGTCAT
TCAAAATTAAAATTGATATGTTCTCCGCTCATTACTACTACTCATAAGCCACATCCGTGA
CACGTGTTACAATTATGAATCATCGATGAAAATACATTTATTTGAATCAATTTTTTTTTT
TTAATCATTATACCATTGTTTATTGTATAGAACTAAATAAATTAACAAAACAATTTCTAA
ATGCTGCTAAACTAAAGAAGGATCAATCAGTCTCTTGTGAATAAACAATTTGTGTGAAAT
CAAAACCGAATAACTAAAGTGTTTATTGATACTGCTAACGGTTATGCAGTATCAATATTC
ATTGTTTTGGTCGTGCCTCGCTATCTCACTCGCGTAACAATTCTGGAATGGGGCGACGTG
GGCGAAAGCCCCGGGAACCGTCCGGTCCGCGGGGAGCACGTAAAGTGACAACACGCGGCC
CGGCGGATTCCTCCATTGACAGAGTCCGCAGCCGGGCCAACAGCCGCTCCGGCCGTTCAC
CGCGGGATTTACTGATCGGTCTAGCGATCTTAACGACATTGCAAGCTGATGATTTCCCAT
TTCTGGGATTAGTGAGCATGACGAACTCGACAATATCACCAGACTGCAAATCGGAGTGGT
TCCCGCGAACTTCGGACATGTGGAAGAATAGACGGCGATTGTCCTCCCCCTCCACTGACA
GGAAACCGAAACCTCCTTTTATAGCATCGACAATGGCACGCCGCTTCTTTCTTATTGGCA
CAATGTTAGTGGCCCTGCCCTCCACGTCGGCTTGAAATGTAACCGGATCGCCAACTTGCA
GGATCTCACGTTTGCACGCGAGTCCCATTATACCGAATTCGTACGATGTCCCATTTTCTA
CTTGTATCATTCCTGAATACTGGGGTTGATCAGGGTTAAGAGCTCTCAGAGTTCTAGTAA
TTGTACCGGAGAGTGTTGGTTCCAACGGT
(1289 bp)

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