SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29528_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/threonine-protein_kinase/endoribonuclease_IRE1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0002119 P nematode larval development
GO:0003824 F catalytic activity
GO:0004521 F endoribonuclease activity
GO:0004540 F ribonuclease activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0006986 P response to unfolded protein
GO:0006990 P positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0030969 P obsolete mRNA splicing via endonucleolytic cleavage and ligation involved in unfolded protein response
GO:0035966 P response to topologically incorrect protein
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1902255 P positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator
GO:1904576 P response to tunicamycin
Transcript
Level		FPKM:7.01 TPM:7.03
ORF EntryO_SariMG11892_complete:A_SariMG_comp29528_c0_seq1
Sequence
(Nucleotide)
TATATAGGTATATAATAAAAGAGATCCAAAATGACTTGAAATCAAAACGAATCAATTACA
TTATTCACTGAAATGGCATATCATTTAATATCAACTTCACATATATAAATAATCTCTTAC
TAATAATAGTTTTTCAACGTTGAATTAAACGATTAATAATAATAATCGACTATTCTCTGT
ACTATTTACGTTTTCTCCTATTTGATATATTTATAGGCCATTTGTGCACATGCAAAATCA
TTCGGACGGTAATGTCCATACTGGAGTTTCTTCTCTCTTCTTCTCCTTCTTTTTGTAATG
ATGTCTATCTCTCATTCTGACATCGTCCTGTCTCTGTCTAAACTCTTGTGGGTCGTTCCG
CCACTCAGTACGCTTTCGGGGCGACCCCCCCTCCTTTCTACTTCTCCAGTTATCTAGACT
CTCATCTACGAACACTCTACTTTTTACAAACAACTCATTCCTATCCGGGTTGCACACCTC
TAACGGTATGTCCTTATCGTTGTTGAGTTCGACGACATCCTCCCTGTTGAATGTGAACGA
CTGCGAGTAATATACCTGCATGGTGTCTTCTTGACGGTACTGCTGCATCTGTAGCCAGAC
GTGAGGCAGCAGGAGTGGGAACCTCCTTAACCAGTACGTGACGAAGCCGTCTGGTAACTT
CCCGAGGCTCTCGCGAACCTCCGGCTCCAGTTCTCTATAGTGATGTTTCTTATTCCGTAT
AGCTCTGAGCAAGTGAGCGACGCGATCGCCGCGGTAAGTGCGGCGCGCGCGCAGGTCGCC
CGCGACCCGAGCGCACACGTGCGCGCGCCAGTCCCCGCGCACGACGCTCCGCCCACCTTG
CTCTAGCGGGTGTTCCCATACAGAACCGCAGCTTTCTACTTGATCACTCACATCCTGTAG
GAAGTTGAGCGTAGTCTGTTTACCCCAGAACATGGGATACTTGAGTATAGTGGCGCAGGG
GGGGCGAGCGCTCGGCCTTCGCGATATCATTGCACGTATAAGTGTCTTAGTCACCAACAC
CCCCTCCTCTGGTAGTACTTTATCTAACTGATCTAAGTTGTAATCTCCAGTAAGTATATT
CGCTTGCCTCCTGAGCACATCACCGAAGGGATGTTGACCTCTTGACAGTACATAATAAAA
CACACAGCCCAGTGAAAATATATCCACCAACGTTGTCGTCCTTTCACCGTTGATCATCTC
CGGTGCTATCCATCCGTCAGTGCCAGTAACTCCAGATCGCCGGGAGAAACTCACTCGCCC
TATATTCAGCTTCTTCGATAAACCGAAATCGGATATCATAGCTCTAATCTCGCCGTTTGC
CGTCGGCATCGATAACAAAACGTTATGCGGTTTCACATCTCTGTGCACTATATCCATGGA
ATGTAAATGCGAAAGGCCCAATGTAGCTTGTCTAAGAATTTCAATTGCGTTTATCTTACA
CTCAAAGTTTAACTTATTCTCCACATAATCTTGCAATGTCGCTGAACATAACTCCAGCGC
AATATACCTAAATTGTTTATCGCGTTCCGTGCAATAGTAGCGAACGACATGCGCGTGCGC
ATCCGACTCGCGCAGTAGCGTCACCTCCCTATCGGCGAACGTGAAACATTCCGGCAACAA
ACGTTTAACGGCGACCGCTCTCTTGTCAAAATTACCTCTGTATACGAAAGTACCCTCGCA
CCCTTTGCCCAGTACTTGATCAGTGTAAAAGCTAATCCTGCCTATTCTGACTTGACCGTC
GCCTATTTCCATCAGCTGTCCTGTCACTTCACCATGTGATGATGATGTAGAGGTGTTCGA
GCCGCGGGAACCGCCCTGCGATAGTTGTTGGAATTCACGAGCCTGTAACCGTAAATACCA
AAACATCGTTATGACCAGTCCGACTAATATTATTAATGCAACTTTGAGAACTTTGTTCTC
CTGTTGGTGTAACCAGACGTAAGTCTGTTTGTACCACAGATCCGGTCTGAAATTGACAAA
ACCTTCGAACAACTCATCGGTTTGCACCGAAACGGATATCGAATTCGATTTCAGATTCGT
CTCGTTCTCCACGTCCTTATCACCGGCGGAGTGATGGACCTGGCCGTTAATCAATTTAAT
CGAATTCGTACTGCTCTCTCTGGTGTTCAACAGATTCGAATTCGGCAACTTCGGCACCCA
GGACGTCGTCAATTCGGGCATTTTGTAATGTCCCAATAACAGATAGGGTGTCGATACGTG
CAAGTTCAAATCGTTCAGTTTATAATGGACATTCTTGAAGGGTTCGTACGTATTTTTGTC
TATATTCTCCCTGTCTATACTCTCGGCACTGGGGCCTTCGATTAGCAAAGGGTGCGCGTG
CCCGGTCGATATTGTAATCGTGTTTTTATCGACCAATGACGATAACGCATACAGACCGTG
GTTATGTTCACCGACGTATAATGTAGGGTATAATTCGATATTCGAATTCTTGATCCCCTG
TCCGTTACTCAAAGTGGACGCGTCTTCCATTATATGATCGAGCGTGTCGTCACCGATAGA
GTTGAAAGGCACAGATATCAATCCGTCTCTGTCCAACAGATAGGCCGCCACGACTGGAGT
TTCAAAGTTGTGCGACCAAACTAAATCACCAGTTTTACGGTCAAAGGACATCACTCGACC
GTTCGAAGTCGACGTGAAATGTATAATACCATAATCATTTAGCATCTCTTTACCCATGGC
ATGCGAAGTGTAATCAAAGAAGGTCACATTCCACTTATGGTTGACATTCTTCGAGTCGTG
CATCAGTATGTTATACTCAGTACGAGCTACGTAAACTCCCCTCTTTTTCTCGCGATCACA
TGTATTATCATCAGCTGTATTGAAAATTTTCGATTTGTCAAAACCTGAGACATGTTCCCT
AGATCCTGTCAATGGGTCCAGCATGAACCATGTGTCACTTTTCTTCCCTGTATAAAGTAT
CCCATCAGTGGACCTACACGGAGCGTTGGCTACCAACTCCGGTATTGTGAAAGGAAGTTT
TTTCAACATCTGTTGATCGCCTCTTGGTCCATATACATACAAGAAACCATGGCGAGGGTC
TGGTAAAAACTGCGGCATCAAATTGGCACCTTGATTTGGAACTTTTACGACGGGTTCGTC
TTTTAATTTCCAGATTATGTTTCCTGCTAAAGGTTCCACAGCAACCATGCCGCCCCCTAA
CGTGGCAAACAGCAGCGGTCGATCATCCAGAGCACGCGATAACTCTGTGCTCTCCTTTCC
TTCTTTATCTACAATAGAGCCCAGGCCACAAGACCCTAATAATAAAACAGTTAAACACAG
AAAATTCATTATTATCACTAACTTATTCATAACACAAACAAATTAAATTCCATTATTTTT
CATATAATAAGCGCAATTAT
(3380 bp)

- SilkBase 1999-2023 -