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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29527_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RNF19B-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044194 C cytolytic granule
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:7.09 TPM:7.11
ORF EntryO_SariMG11890_complete:A_SariMG_comp29527_c0_seq1
Sequence
(Nucleotide)
TTTGCCTAGTGCTGCCATTTACTAGGAATTTAGGAAAAACTAAACGAATCACAGAATAAT
ATGGGGTTACACATATGATTGGCACAGGATTAATATATACTCATCCGTAATGGACATTTT
TTTATACGAGAATAACAAACACATAAATACACAAGAGTCAAGAAAAGACAAGATTTTTAT
TAATTACTCCGATCTAGTCTACGTTATACCAAAGTAAACGCAATTCAAGCTAATATAAAC
ATTTATATAATACACAAACAGCTATACAGCGATTATAAAGTTCTAGAAGGTTCGCGTGTA
CTCCATAACGTAGACTCGATAGTACATACAAGTCGCTGGAAAAGGTTCATTGAACTTTTG
ACATTTTAATGGATATTTGTATTGTCGACGCAAAAGCTCCTTTTAGCTTCTCTACTCTGG
CAAGAGTATTATTAATAATGAAAAAACCCACAAAAGATAAATAATGTAAAATAGTTAAAT
AAAGAGAGTTGGAAAATAAATCGTTGAATTTATGATTAGTCCAACAAACAACTACCGTAA
ACAGATTTAAATATTTGTGTTGTATTCAGATATTTTAAGGGGGAAAAACATTACAGGAAA
CTAAATTATCTACGGATATTTGAGAATAGAAGAAAGAAAATAATATTTATTATAGAATGC
GAAACGTTAACAAAATGTTTACTAACAAATATTCGGCTAACAACGGCAGCGACGGACGAG
TCTTCGCGATAGGTAAAAACGTAAACGCGTGACGTCATTAATCACTAACGTTAACGGCGT
ACCACGTATAACTCACTTTTAAACATAACATTTACATCCGTTACAAAAATAGATATCTCA
CAGTGTTCTTCTATTGTCGATTGATTTTTCAAAAATCATATAGTTTGTACGTATATAAAT
AAACACAACAGCAGTCTCTGACTGAATCATAGTCTAAATCAAAATCAGATACGATTATGT
GTCGTCGAATACAAAAAAATGACACTTTCCCGAGCGAGGTATCTTCGAGTTTCGATTAAT
GAATGAACGATCTCCTGACGATTGGGATGTCATTGGCGATGGTGGGGCGTCATCTTTCGT
TAGGAGGTATGGTGGGGCGGGCTAGGGGAGCGCGGGGGTCGCGGCGTGCTGGGGTCGTCG
GGGTCCGCAGGGGTCGCGGAGGAAGTGCCCGCTTCAGGGTCCGGGGGCGGTGCCGGTGAG
CCGTATAGGAAGAGACTCCGCAGTCGCGCCGACCGCGAGGAGGTTGATGGGAGGTCGTCG
GGCCAGCTGGCGGCACTGGCAGCGCTGGCGGTGTCGTACGCGGCGACGTCGACGGTGACC
TCTAGCCGGTGCGCGGCCGGCGAGTGCGACTCGTGCCCCCCGAGCGAGCCCGCCAGCCCG
GCGAGCGAGGCCGCGCGAGCCTCCGCCTGCTGCGACCCCGCCGACAGTGATGCGTCACCT
ATGCTAGGTTCGAGACGTCTCGAGGCGGCGTCGAGGTCGTGCGGAGGCGCGTCGTCGTCG
AACGCGGCGGCGGCTGCGGGCCTGGGCGAGGGGGGCGAGCCCCACCCCCCCGCGCGGCAA
AGCGACACCGGCACGACGCCGTACACGTAGAACAGAAGGATCGGAACACCGATACCGACG
GCGAGACCCGCCACCAGCGGCGACACCACCAGAGCTGCGGCGACGGCGGCTGCGACCGCG
GCCCGGCGCTTGGCGACAGTGGCGCGGCGCAGGCGCCGGTGCGCGCGCCGCCCCGCCCAC
AGCGGTAACCCGACCAGCAGCGCGGGCAGCGCGACCCCCGCGACGACCGCGATGCCGAGC
GGAGCACCCGCCAGCGTGCCGAGCTGCCACAGCAACTTTTTCTTGCGCGACCACGGCTTC
TTGCCCCAGAACGTGCACCCGCTCGGACTGAGATAATGTAAGTCTGAGACGACTTTCATA
CAGAGCCAGCAGAACTCGGCGCCGCATACGCAGCACACCATGTGGTTGCAGGAGCCGTCC
TCCACCTTCACTATCAGCACCGAGCAACGTGGACACGGCTTTACGTCACCGTGGTCGATA
TCGGAATGTGAGGGCTGCGGTGCGCTTGGCGGAGACTGGCGGCTTCTCCTTGCGGCGTCG
CATGTTTGCGTCGGGTGCCAGGCTGCTTTGCAGTGATAACAAAAGGACGCTCCACAGCCG
GGGGCGAGGCAGGTGAGCTTCGGACACGATGCGCATCCTGTCGCCACTACAGCGAAACTG
CAGTCCGGGGCGGGACACCACCTCGTGTCGGGGTCAGCGGCGAGAGCGCGCCTCACAGAG
AACTCTTCGTATTTGTCATAGAGGGAGGGATTGTCTACTATGCGACGAACATCTGAGGGA
TGCACGTTCTCGTGGCAGACGGGACAATTGACCGGCACCCGCGCTTCTGAGATCTCAATA
GCCAGATACTGGCGCAGACAAGGTTCGCAGCATCGGTGAGAGCACCAGGCCAGCCTGACC
GTCGCACTCGCGTTCAACACCGACAGACATAGCGGACATTCCAATATATCGCCCTCTTCA
TCCTCTGCTATAAACTCGACTGTCGTTTGTTTGTTACTCTGCGACTGCTCAACACCGCTC
TGCTTAGACGATCTCCCATCGCTTTGATCTAATACTGTATGTGCTAGTCTTCTGCCCACC
AATGGGCTATCTAGTAGTAGTGTTCGGAGCGACCAACGGCCGAGCATTCCACCGCCCCAG
CTGCATCCTCCACCGCTGCCACGTCTCATCCCTTCACGTTCCACCATCACACCAAAACAG
TACACATAACACACCGAGCGACCGAATCCTGTTCGCACCTTTCATGCACTACTGCCGAAG
AACATTGGACTGTAAACTAGTCTTTACACAACGCGCTGTTGAGTAACATAACTCGTAACG
CATCAGCAAGAGAAAGTCCCGACGGCGAGACTACTACGTCCCCACACCGTTTATCGAGAA
CGAGATGCACTTTCTGCCGAACAGCATTAAAAACCACCGATTAGTGGAAACTAAAACTTG
TCATGCAATACAGACACCGCGATATGTTAAAACACACTATCACAGGGTACATAGTAAAAC
ACATTTCATCGTGAATGCAACCACGTCTAGTAACGGTAACATCTGTAACGCAATTTTATT
GAAATAAAATGTACCTATAAGTCTAACTTAATCAAACTGCAAAATGTACCTAATATCTAC
GTAAAATACGAATCCCAATCCGCACACAAAACACAAATACGCCTT
(3225 bp)

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