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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29492_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vam6/Vps39-like_protein_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0034058 P endosomal vesicle fusion
GO:0097576 P vacuole fusion
GO:1902774 P late endosome to lysosome transport
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:6.70 TPM:6.72
ORF EntryO_SariMG11744_complete:A_SariMG_comp29492_c0_seq1
Sequence
(Nucleotide)
AAATTTCATAGCGATTATAATTTGTAACAAAAGTATTATCAGATAGCTTACAAGTTATAA
AATTAAAATATCAATATTTACAAGGTATTTTATGATTACAATCAATAATTATCGACAGCT
CAGAAGAGATCTTTGTGAATTATCTAAAGCGACGTCAAAGGGCCATCCATAAATTACGTT
AAGGGCAGGATGTCGACATAGTGGGACAACGAATGGGAGGAGCAACAATTCGTGACGTCA
TATTTCAAAATATTGAAACCCGAAATACTAACTAATCAATGCAAAACTTAAAAATATTTC
AAACGCAAACAAAACTAATCTCAGAACTATAGATTTAATTTAATCATTTCTGGATGTAAA
ATATGTGACGTCACACACAATAAAGGGGAAATGTCACAAATGTTGTAACTAATTACGTAT
TTCGTATGAAGTAATTTATGGATGGCTCTAAGGAGATATCCAAAAAAAAGAAGTTTTTAT
TTATATACGTTTCAATCATTTATTTTTCAAGCCTACATGAATAATGTACGATATCGCCGT
TAGGGTATCGGACAAACGCGCTCTGGTTACCGAACCGTTTCTTACAGACTTGACAAACGT
CACATTCGTTTATCACAACGCTCTTTGATTCGTGGTACTGTTTCAGTTCTTGTACCTGCA
TATGTTCCGCGTACAGCAGTCCTTTGAGAATTTGCATACGTCTTTTGAGTGATAACTGGC
CATCGAGTGCGCTTTCAAGGAAGTGTTTGAGTCGAGTTAACGGTACACTGTCTGGTAATA
CCGCGAGAGCCTTTATAGGTGATATCTTATCAGCGTGTTTCTCTAATATAAACAGAGTCG
TTTCTAGATCGGGTTGCGATGTCTTCGGGTGTCTCGGTACATTCGCCAGCGGGCTGCTGA
TCGCGTTACTGTCGGGGTTCATCAAAATCCGCATCAGTATCACGTATATGTCTTGGGTTT
TCTCGTTAAATTTCTGGCTTACGTTCTCACAGTACTTTATTGCCCGTTCTACATCACCTA
GAATCAAAACATATATAGCAAGCGCTTGCTCGTGACGTCCAAGTTTACCCAAAACAACGG
CCCTCTCTTCGAACAAACTGTCCACGGGCAGATGCAACAACACTCTCTCCGGAGTATAGT
GAGTGGATTTTTCTAGAAACGCTAACATTTTTGATTTGGTATGCTGCAATTCCTCTTCAG
TTATATTCGCTTTCTTGTCTGTTATCTTCTCCCTGTATATATTTATCAAGGCGTCGTGGA
ATAATGAGTTCCCATCGTTCCACTTGTGTATAACATGTTCCAAATACGGTATGACCAAAG
ACTCGTGTTCTCTCAGCAGGAAATCCAGTATTTTAGGACGAGGCAACTTCTCTACTTCGT
TCACGTCCTCAGTGAATATCTTCAAACCTTCCTCTGGGTTTTCTTTTAAAATCCAATCGG
AGAATTTGAATATTAAATTGATGTGTTCAGCGCCTAAGTGCTGCAAATAATTCTTGGTAC
CGCGATATCCTTCAAGACTGGAATCTGGCTGTTTCGCTTGTTCTCTCAACAACTGAAGCG
CTTTCATGTGCTGCCCTTTAGTTTGATAAAGTATTATCAGTTCACTGTGTTTCCCGTGCT
GCACTAATGTTCTCTCTGCTTCTTCCAGGCGACAATTGTTCAGACGCAACAATGGCGCTA
CGAACGCGTCATTTGTCTGTAAGTAGCATTTTAATAAAGTAGTATCAATCAATTCCAATT
GTTGTGCGACATTTCTTTGACTGGGGCCTTCGTTTTGGCTATTATTTTGTTCGGACTCGC
TATCCCTGTTTATTTTCGATCTTAACTGTACCAAATATTCAATGAGAGCGTTCAAAGCGT
TCTCCAAATCTTTCCCTTTTAACTTGTTGGTTTTCGTTTCACCACCGCTTTTGTTATCTA
ATTCGGGGAATAGTTTAATAACATCGGCGGGATCGGTGTTTAGTTTCGTAAATTCTTTCA
TAGCCTGTGAGTAACATTTATTATCAAACTGTTCTAGAGCGTACAGCACTCGTATGGAAT
GTATCTTCTGTTCCTTCTCTTCTGGCAAACATTCTGACAAACTCGTCAAGTCGATGGCTA
TTTGAAACTGTTTGTCCTTTAATAACTGTTGACGTTGTTTCGTTATATCAACTGAACTGA
GACACCAGACCTGACCAACTGAAGCGACAAATATCAAACCACGTTTGCACCTATACAGCA
GTCTCGCTTTATTCAGTTCTGCCAATGTTTGTACAAACAGCACTGGTTCCACTGTTTGGA
CAACAACTTGGTCCTGTAGAAGGCCCAATAGGAATGGCTGGTCCCAGACGACAGCTAGTG
GTGCTTCGGTCCATTTGATAGTTTTCTTTATCTCTATCTTTATATTTATGTCAGTGGATT
CTTCAACGAGTACTGAAGTTTGATCTCGACCAAGAAGAAATGAGGTTTCATTGTATTTAG
CTATGGTCGGTTCTAAAGATTTAGAGCTACTTGTTGGAAATAATTCTTTCGGTTTTCCTT
CGGACACATCATATAATGTGTATTCCGCTTTAAAACCAACACATAGATATTGCAAGCCCC
AAGCCACAACTTTTGGCACATCAGGTACATTGAAATCTAACAACCATTTATATTCTCCCA
TCTTTCCGCAGTATAGTTGAAGCTTTCTTCGTATTACAACACATAGTCGTACCTCGGAAG
CTATTTCACCACTCGCTGATGTTGTAACTTTATTATCCACAGCAAACAATGAGGCACCTT
TGGTTTGATCAAATGTCTTAATCAATGGAAAATTTACACCATTTATATTGTATGTGGCAA
CAATAGAATCTGTCAGGCATATTAACAAATTGTCATCTGGAATAACTTCAATTTGTTGAA
TTGGCTTTTTGCTAAAGTTTTTTCTTAATCTTAATAGCTGCACTTGATATTTCTGATTAC
TATTATTTGCAGACAAAGAGTACATCAACAGATGACCTTGTCTAGTCCCTAATAATAGAT
TATTATCATATGCAGCGATCGCTTCGATTTGCATTGTAGCATTTAGTAAGTTGGAAACTT
CATAGGCTTCATGCATTTTGGATATATTGTTTTTTTAGCTTTGACTAACTTACACCCATA
ACCCTTTTAATATTTTCGTCGTATTTATTTAGCTCCGTCCTATATAATTCCTATAAAATT
TTGTCTTAGTCGCATACTATATTTGAAGGTTACTTGAACATTATTTTATAACAATATTTC
ATCGTATATACCTAAAATTTA
(3261 bp)

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