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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29479_c1_seq7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8_isoform_X2_[Papilio_xuthus]
Ontology
GO:0000281 P mitotic cytokinesis
GO:0001669 C acrosomal vesicle
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007032 P endosome organization
GO:0007049 P cell cycle
GO:0007265 P Ras protein signal transduction
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019897 C extrinsic component of plasma membrane
GO:0030496 C midbody
GO:0031313 C extrinsic component of endosome membrane
GO:0036459 F thiol-dependent deubiquitinase
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:3.56 TPM:3.57
ORF EntryO_SariMG11672_3prime_partial:A_SariMG_comp29479_c1_seq7
Sequence
(Nucleotide)
ATTTTGTATGATAATCTCTGTATTTCGTAACAACAAATGTAGTAAATATTATTATTTACA
AGTCTAAATTGCGATAGTTATTTATTAACACGGCGTAAGCGACTGCATTCGTCAATATGA
CTGAGACGCGTAGAAAACAACTACATATAGGAAAATGCATTGAAGATTTAGATAAATTGC
ACAATGTGCCCGATCTAAAGACAAAAAGGGCAAACGCGTTATGTAAATCAGCAATGAAAT
TGTTTGAGAGTGCTGAAGAGGCTCGTGATAAAGGCGATGAGGAATCTTCTTACATTTATT
ACATGAAATACCTCCGTGTGATCGCATACCTGAGTAAAGACAAGGAGTATTTGAAGAATA
AAACGTACTACAATAGTATGCTTGGTGCTAAAAATCCAAACAAAGCGATTGATGCTGCTG
AGAAACTGAAAAATAGTCTCATTATCAGGTATTCAGTAGAGCAGAAAGTGAAACGTCTGA
ATGATATCAAGGAGAATGAAATGATCAAACAAAAAATAGAAGAGAACAGAAAGAAGGCTA
TAGAAGCTGTAACAGTCAATGAACCTGTTCACCCTTTAGGCTTACCAGACTTAGATGAAG
TGACAATAAAAAGTGAACAGTTGTATACAATCCTAAAGGCTGGTAAGTTGAAGGTGATGA
TACTGGATGCTAGACCCGGCAAGGACTATGTCGAGTCACACATTAACTACCCAGCCTGTG
TCAGTGTACCTGAGGAATGTATCGCACCTGGGCAATCTGCAAATGTCTTGGAGCAGAATC
TTCCTCCGGCATCACGTCCCGTGTGGGCGGAGCGCGCCGCCATGGAGCTGATCGTGATGC
TAGACTGGAACAGCACTACCTTCATACCCGGAAAGACTTTGCACTTACTTAAGACCATTT
TACTTAAGTGGGACGTAAAAGTTCAATACCCTAGACCACCGTTGGCTCTCAAAGGTGGTT
ACGAGGACTGGCTGCTGAAGTATCCCGCACTTACCACAAACCCTCAAGCAGTTCCACCGC
GGCAAGACGACTTCATGGATGACATGTTGGACGAGATCGAGTACCCGACGTGGTCTGATG
TGGCCTTGTCTCCGACCCATGCGAGTGTTGTTCAGCGCAAGCCGGGCGAACCACTCGTCG
ATCGTACTAGCAAGGCGGCTGCCTTACAAATGTACGAGGAACGGAGTCGCAACATGCAGC
GTATCCTGGAACAGCAGGAGCGGCTGGTGGACACCTCCCTCACCCTCGAGATGCAGAGGA
TCGAAGCCGAACAGGACTGGGAGAGTGTCCGAATGAAGCGGGAAACGGAACAGCAAGACG
AACTCCGAGCCACATACCAGCTCCGCGAGCAGGAGATCATCTCCCAGCTGATGCAGCTCG
AGAACAAGCAGTTTGACATGGAACAAGAGAACCAGAGTCTCCGCGAACAGCTCGAGGAGT
ACCAGCGCCGGGAGAAGGAGGAGGCCGCCCGCCTCGCGGAGACCATCGCCAGCGCAGACC
TGGAGGCGGAGTCTGCAGCTCATGCTGAAGCTGAGCGAGCCCGCGCGGCCGCCGGGCGGG
AGCTGGCCGCCAAGCGAGCCCGCATCGCCGCCGTGACGCAGCAGCGCGACCAGCTCGACC
GCACCCGGGAACTCCTCGAGCAGGAGAGGAAGAGGAAGCTCGCCGAGGCCAGGGAGAAAC
GGAAACCCCACCCCGACAAGATGTCGTCTGATGAGGAGGAGGTGCCCGCGCCGGCCTTCG
ACCGGAGCACGAAGCCGGCCAAGCTGCCTCCCTCCACGGAGCTGCACCACCGTGACTTCC
AGCCGGTCTGGGGGGACGTGGGTCGCGGTCTCACTGGCCTGAAGAATTTGGGTAACACGT
GTTATATGAACTCGATCATACAGTGCTTGAACAATACTGCCATCCTTGTCACTTATTTCT
GCAACGGGCAATACTTAGAGCACGTCAATAGGTCCCACGGCACTCGCGGCGCCATCGCGG
AAGAGCTAGCGGCCGTAGTGCGCGCGCTTTGGTCCGGACAGTACCGGTTCATCGCCACGC
GAGACCTCAGGAACGAAGTGGGTAAACACCAGCGCGCGTTCCGCGGCTGCGAGCAGCAGG
ACTCGCACGAGTTCCTCACCATCCTCATGGACTGGC
(2136 bp)

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