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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29479_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Amyelois_transitella]
Ontology
GO:0000281 P mitotic cytokinesis
GO:0001669 C acrosomal vesicle
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007032 P endosome organization
GO:0007049 P cell cycle
GO:0007265 P Ras protein signal transduction
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019897 C extrinsic component of plasma membrane
GO:0030496 C midbody
GO:0031313 C extrinsic component of endosome membrane
GO:0036459 F thiol-dependent deubiquitinase
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:6.14 TPM:6.16
ORF EntryO_SariMG11652_5prime_partial:A_SariMG_comp29479_c0_seq1
Sequence
(Nucleotide)
GATCGAGTTTCTTGCCGGCTCTTATCGACTGTGTTATTTTCCGAACTGGTGGTAGTCTTT
TGAGGTTCATAAGCGCCGTATTAGGGCTTAATTGAATAAAGAACTTTTTGATTTTGATTC
TCTGAAACTCTAAGCTCGCAAACTTAGATATTACTGTAGTGATGCAACGGAAGTGACGTG
ACGGAAGTAAGACAAAGATCAAAATGTAATCTTAGCGAAAACAGAAACAAATGATGAACG
GAAGCTAGAGGAATAGTATTATGAAGAAATCACTTTTTGAAATTTCAACAGCACGTTTTA
GAATTAAGAAATCAGGACATCCTGGTTCTCCTTCGTCTACGTCTCCTTTTAAAAGCAAGA
GGCAAAAAGCTCTCTGTCATAAAATCAATGCATAAAAATGCATGTTTAGGACTGACTCGT
TTTTGTCCATTTTTTATGGTAGCTCGGGAAAGTGATGCGTCTGTTGTAAGATTCGATATC
ATGGGAAGGAGGGGACATCATACTAGAAAGGAGTCCATTCCATTTGTGTACGATCCGGCA
AAGGTACGAGATCGTGATATTTTTTTTTTAGCAACTAGATGGAATCTCATGGCTGGATAG
AATCTTTGGTTATGGAGACCAGAATCTAAATTCTTTTGTAAGGAACGCAATTGGCGACGG
ATTATTCCAGAGGAATGGGTGCATGCACGTAAACTCGCATTTTTAAGTTAAATTTCTGTT
ATAAAAGTTGCAGATGTAGAAACCTTAAACATATGATACGGAATAGGCGAATAAATATAC
ACATTTACTCCAATATTTTGTATTTCATTTGTTTTTTTGATACCATCTTAAGTTATTCTA
AGCTAACACATAATCCTTAAAATGATGTCTTTTTTCACTTCAGCTTGAAGCTAAAGCAGC
TTTGGGTTTATTATATACATACATTCATTCAAGACTTCAGGTTAGGCCGAGTGATTAAAA
AACCAAAATTTTGTTGTCCAGATAACACCAGATTTACGAATAAGTTAACTATATATAATT
AATACAATCAAATTTGTAGTATTCGTTAGTTTTAATCTAGATATTAACAATTCCATAAAG
TGACAGTGGCATTAGAGTTTCCGGGATTTAGTATCCCCCATCCCTTCCATTTCAATCACC
CGTAAGTGTTACGTTTATCACAAACTCGTATATATATATTATACACTCTCTAACTATACG
TGAATTTATCGATAGCATATAAATAACAGACAGAAAGAAAAATATATTAACATCACTATA
ATTTAATTTTTTCAAATAGGTATACATCGAATGTTTTGTGCATAAAATCGAATGCAAATG
AATGAAAAAAAAAAAAAACAACAAAAGAAACGATAATAAACAGGCAGAATTATTTATAAT
TAATTAACAATCAATACTTACATGGAAACATTATCCGAGTGTCAATAAATTTTCTTTTCA
CAATCCACAAAATCACAAAATTAGCACTGTTTTAGCACAAGTTCACTCGTGATTCGACAC
AAACACACACTGTGACGTTATATTCGATTAGTTGAGAGTGACGTCACACAGCCGGCAGAG
TGTCTCGCAGAGGCACTGTGTCCGGAGTGTGATCACACCTGCCGCACCGGTCCGCAGGAG
CTGTAAAACAGTATGTAAGCCGCGCTCGACTTCACTTCGCTCGAGGGTATCTCCGTCACG
ACGTGGTCGTCATACTTGTACCATTTCCCGTAGAGATTGCTCTTGCAGTAGGCCGTGTAA
TGGCCGCCCTCCATCGAGCCGTAGTGGTTGGAGACCGCGTACAGGCCGTAGGGGTGGCTG
CCCGGGCAGTGCAGCGCGAACTGCCTCATGTCCAGCTCGTCCAGCGGGAACTCGATGTAG
GTCTGCTTCTTCCTGTACGCGTTGCACATGTACTCCTTCGGGTCCACGTAGAACCGCTTG
AAGTGGATCACGAGGACCGGCGGCAGCCGCGATATGTCCAGCTTCTTGACCGCGTCGCGC
TTCTCCTTGCAGTCGGGGCAGTTCCAGCCGGGTATCGTCTCCCCGTTCAGGTACAGCTTC
AGGCAATCGCTGAGCGAGCACCGGTTCGCGTTGGCCGGCAGCTCGAGGGAGAGGTTCGAG
AAGGACTCGTAGGTGACGCTCTGCTTGGAGCAGACGGTGCACTTCACAGTCGACTTGATC
TGCCCGTAGAACAGCTTCAGTATCAAGCTCTCCTTCGACTTCGTGTACTCGTACCAGGCC
TTCTCCGAGGGGGGGAGGCTCTCCTTATGCGGTGGAAGGTTGATGGTGAACTGCAGGTCG
AGATGGAGCCAGTCCATGAGGATGGTGAGGAA
(2312 bp)

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