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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29454_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_negative_elongation_factor_D_[Amyelois_transitella]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:5.50 TPM:5.52
ORF EntryO_SariMG11588_5prime_partial:A_SariMG_comp29454_c0_seq3
Sequence
(Nucleotide)
AACAATATTACTCCTACCGGAGGTCTGTGCACACGGAATATCAAATTTTGTGTCGACGGT
TTCGTGGATTTGGCTGTCGTAATAATGACTACTAAGAAATATGGTCTCATTTTACCAGAT
AAAAATCAGCAACGACCACTCACTTTCCAAGCTTCAAGAAATGTATTTGGAAATGATTCT
GACTCTGATGATGCCACAAGTAAAAAGCCCGTGTTGTATAGACCAAATGAGAGTAAACTT
AAACAGGCAAAAATTTCACAAGATAAAGCATTACTAGAGGACCCAACAGTTTACCAATAT
GATGAAGTATACGATGATGTAATGGAAAAGAAGGAGAAGGAAAAGGCAAAAACTTTAGAA
GACAAGAAACCACGTTACATAGAAAAATTAATGAAATCAGCTAATAAACGAAAAATTGAA
AATGAACGACGAATTGAGAGACAGATTCAAAAAGAAAGAGAAAAGGAAGGGGAAGAATTC
AAAGACAAAGAAGTTTTTGTGACTTCTGCTTATAAAAAGAAAATAGAGGAAATGAAATTG
GAAGATGAGAAAGAGAAACGCGAAGAATATTTGGAAAGTATAGGAGATGTCACTAAACAA
AGAGATTTAGGTGGTTTTTACCGTCATTTATATGAGCAAAAGTTGGGAAAAGATGAAAAC
AGTGACAAAAAAGAAAAAACAATATCAGATACTTCAGCAACAGAAATTACCGATAATACA
ACGGAAACGGATAATATTTTGTTAGATAAATCAAATAAAAGGAATTACAGAAAGAGAAAA
ATCTCTGAAAATAAAACAAATTTATCTGACGGAGAAATTGGAGCATCTGATGAAGAAATC
AACAGGGTAAACTTAGTAGATATAAAATTAGCGAAAAAGTCAAAGAATAATGAAAATATA
GATGCTGATTCTGACTTTTCTCAAGATGATTCAAGTGATGATGAGATCGAAACGAAAAAT
AATGATGCCATAGACATTTTGCCTGAGAATACAGCCAAAGAGGAAACTTGTGCTGAAACA
AGTTTGAATTCTAATAAGGAAATTGATAGTGTTGCTAGAAATGATGAGAGTAAATCAGAG
GAGGACAAACCTAAAATTGACATTTGGAAAAAGAGAACTGTTGGACTTGTATATCAAGAA
GCATTAAAGAGATATTACGAAAGAAAAGCTGCTAGAGGTAGTTAAATAGAAAATTTATTT
GAGAACAACTACAATTAATTGTATAACTTATTTTATTATCTTCAAACCACGACGTAGAGG
GCCTTGCAGTGAACTATAAACTCAGATACGGGATCGTTTTCGCCTTCGGCTCTCATTGTT
CCAGTAATCTCTTCATTTTCGACCATGGGCAATACGAGTTGGACGAATTCGGGCGTGTAC
GGCGGCGCAATCGCGTCCAACACCTCTGTAATAAAATATCTTATAAGGGAAATATCAGTA
TCTCCACGTTGCCAACATTGCTTTATGTATCTTAGCACGGGTACGACGCATCCACGACTC
AATAAGTTTACCATGCGATCTAGAAGCATTTTCTTTAATTCCAACTGTACTAAAATTTCC
AACTCTTCTTGTGGTGATTCAAATAATTGTACAAGCAGCTTCAGTAGTCTGTGATGAAGC
AACTGATGACATGAGGCGACCTCGTCCAACAGTGCTAAATGTACTGGACAATGTTCCGTA
CATAGTTTAAAATATGATGGTTCGGTGACAACACATTCAACCCACACTAGGACACCCATA
CCAACTACAGGAAATCTGATGCAGTGGTAAAGGGTGGGTAGTTCCGCAATGAGCTCACTC
GAACTGGCCGAGCTGCTGCACACGGCGTGCACTTTTTCTATAGCTTGAACAGTTGCTTTT
AGTTCATCTTTGACGGGCCTGCCTGGCGAATGGCTTTCACAAACACTGGCCGCATACGCC
AAGAGATACATGTACTTTGATTTGTGTTCAGGATTTAGTTTGCTCCCTAATTTGAACAGT
GAATCGACGAGAAGCTCTAAAAATTGAGGGATTCTTAATAGATGCACCGGAGGCGGTTCC
GATTGTGTATACGCTCTGAACAGAACTGATATATCGGCCGGATTGAGAGCGCCACGGGAC
AACATGGCTGCCAGAGCTGTACGAGCGTTCCGCCAAGACTCGCCAGCTGTCAGTGCCAAC
GTGATGGGTGTCACGTCGTGGCCACTCTGTTGGGCACATCTGGTTATTTCTTGTCCGAGT
CTTTTCATAATCGCACCACCTCTAGGCTCTTGTGATAGAATGTGTACAATTACTTGACTA
TACACATAAGTGTGAGCGCCGTGACATACCATTTTAGCACATTCATTAACACTATTTTGC
CAGTCATCGGAACTTTGAAGAAATCCGACTATAGCTGATTTTAAAACTCTAGAGAACACC
TCAATTTGTTGTGCCGCTGTGGATATACTTGTAATTTCGCCTTGAAAACCAGCATCCGAT
ATTAACTTAATTGTGAAATT
(2480 bp)

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