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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29448_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		Lys-63-specific_deubiquitinase_BRCC36_[Operophtera_brumata]
Ontology
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
Transcript
Level		FPKM:0.53 TPM:0.53
ORF EntryO_SariMG11572_complete:A_SariMG_comp29448_c0_seq5
Sequence
(Nucleotide)
CAAAGACTACAATATAATACTGGATATTTACTATTGACTTCTCTATAAGCAAAACTTGGA
AAATTACGTTCTGTTTTTTCGGGAATAATTTTCTATAACAATGCTTGCTTTTATAAAAAA
ATATTTTAAATGGGAGACAAATAAATCACCTGAAACTGCAAAATGTCAGAGGTCTTTTCT
ATTAACTGCTTTTATTGGACTACTTGAAGATGTTTTGTTTTGGAAGAAAATGTGGTTATC
TTTAATAACAATATTGAACATAAATATTATAATTTTTGTATATATTTATTATGAGGTGAA
ATTATGTGGATTTATGTTATCCTCCTTATTGATTATATTATGTATGGATGCCTTTGAAGC
TTGGTTGAAATATAAGCATAGAACTTCTTGTTTGAAGAGAATTGCCAGTAATGATGGAGC
TAGATTGAGATCAGTATTCTTCCAATTGAATGAGTGGATTGATAAACAAAAAACAGATTT
TTTAGTCCTAAGAGATTCTAATCACACAAAGGCTTTCTTGCTGGCTAACATAGTTTTGGG
ACTTATCTTTATCATTGGAAGATATATTAGTGGCTACATAATAATATACACATTGTGTAT
GTTTTTATGTATGTCATATAAAATTGTGACACCAATGAGAAAGATGTGCAGATATATACA
ACAAGATTTAGAATCTGAGTGTGAATTTGAAGGTCTTATCCCAGATATATCAGACGTGGA
CATAAATTTAATGTCGTTTGAACCTGAACCAATGATAATAGATGAGAAACAAAATTATGA
TTATTGGAAGCCTGAGGACATGCCTTTAGAGGAAGGCAGTGATAGTTCTGAAAACAGTAG
TTCTCTTGTGACTAACTTTTCCACAGAAAAGATTCAAACTCTCGAAAAAGATGTTGAGAT
TTCTGATTCTAGTGAGGATGATTATATACCACTTGATCAACCAAAATTGCAACAATTGCA
GTCGACTCTGGAAGTTGTTGATCCAGCTAGTTCCTGGGGTAGCAGTGCATACAATGCTAT
TTGGAATTTAACAGGAGTTGTAACAAATATAATGACAGCTCAAACAGAAGTTGGTAAAAG
GAAGCGTGGTTCAAGCATGGATTCATCCGAAGGCTTTGAAATGATTGATGAAAATGACTT
AACATAAACATAGATAATTTCAAATAATTTTAAGTTGTCAAAAAAAATATATAAAATTTG
TATGATTATTTATTGATTTAAAATTTAAACATTACAGGACATGTTTTCTAATTTCGACAT
CATTTCTTGATGCTGTATTTTTAATGCCTTCAAACGAACACTATTTATTAAATTTCGAGC
TACAAGAGCTTCTAGCATTGGCCTTGACATCTGCAATAAATTACACGATTAAATTTCAGG
ACTATAATTCCAATTATCAGAAATATAGAGCTCAATTGTACCTTATCAACAATGTGCCCT
ATTGCTATAGTTCTCACTGCAGCGTTATGTTGTTTAGTAACTATGTCATGTGGTTCATTT
TGAGTAACTTCATTGCTGTATGCTTCATCTTCTTCATCTTTCAATATTGTTGGCAATTGG
ATGAGGGTTTCAAAGTTATTTCTCAATAAAGAATCATTGTTATTTATAATTTCCATCTCA
ATTTCCCTTCTACTTTGACTGGACCCTTCATTGAATGATTGAAAACATGTTATTTGCACT
GATGGTGCTTTTGTGGATTGATCAGTGAGGAAAACTGCAAATATTATACCAACAAAACTT
GTATCCATTCGTTGATACATGGACTGTGTAGAGAGATCAACATGTGAAGGCCAAACAGTT
ATATGTGGGTGTGAGTGATACCAGCCTACTACTCGTAGAGGTCGACCTAATTCTGCTGCA
AGTTCTTCAGCTTTCAGAGTAGCTTGAACCAATTGCTCTTCAGAAATTTCAACTCGATCC
GGTTTCTTGTCTAGGCGTCGAAGAATAACAGACGACACTATTGAAACCAGAGTCCCGTTA
TTATGCACCTCTCCAATTAACAGCCCCATAATTTCTTCTTTCTCGGTAGATAGAGCATGT
TGAACACATACTAAAGTTACATCCGAGGAAAGTAATACTTTATTGAGCATTACGTCTTCC
TTTATTATCATTCAATAAAAATAACAAATTATGTTTACGAAAAATGAATGTTCACACACT
GAAAAGGTTTATTGCAACTACAAAACAAATTTTTAATATTGTAATAATACGAATAATCGA
AAAAAAGGCGCAATTTTCAAAAAGGAATTGATTTCAGATTATTCAATTTGAAATTGAGGT
TTTACTTAAGTTATACGTTTGTACTAATTTTCTTATTTATCTCTGCCACTTTACTCTCTT
ATAGTTTTTG
(2350 bp)

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