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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29348_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nesprin-1-like_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:3.13 TPM:3.14
ORF EntryO_SariMG11350_5prime_partial:A_SariMG_comp29348_c1_seq2
Sequence
(Nucleotide)
CGCCCCCCGTCCCCAGCGGACTCCGCGCCGGTGCCGATCCCGCCGCGCGAGCTGCACGTG
AGGGCGCGTCTCGAAGACCTCATCGATCAGGTACAAAGCCATCTTGAAACCCTCGGCGAA
GCCGTCCACGGAATGGAGGAGGCTATGAAACAGGTCTTGGAAATTCAAGAATGGATAAAC
GTACACAGCGCTCTGGCACGAGACTGGCTTGCCAATCCATCGAAGCTGAGGCCGGAAGCT
GCCAAACAGGACATGGCAGCAATGAGCGATGCATTAGTATCCATCGGAGAAAAGAGAAAC
AGACTATTGACAGAGATACCAACTGAAGGTCTTGAAGATGAGATCAACCTAGAAGAAGAC
CTCGACAATTTAGAAGAAGCGATTGTAAAAGCTATTGAACGTGAGAAAGGCAACCAGGCC
ATCATTGACGATTTCCGTCATAAATGCCAAGAGATACACGAATTGTTCGATTCAGTTCTA
AAAAAAATGTGCTTGGCTGACAAGGGATCTGGACTACCGTGTCCACAAAAGCTCAGTGCT
TTGAGAGAATTATCTTCTGAATTTGGACAAGCCGGTAAAGAGAAGGTTGATAACATCAAA
GCAGTGGGATCACAAGTCATCAACATTGTCAGTAACTTAGAATCTCAGCAAGTAGAAGAA
CAGATGAAATCAGTTGAAAGGAGGTATAATGATATCGCAAAACGAATTCAACGCAAACTA
CAAATGCTTGAAATTACATACAAAGCCATCGATGGAACCAAAAGCGAGGTTGCTGCTCAA
AATGAATGGTTACAAAAAGAAATTGATAACTTATTACATCCAGAACCACTTGGTTATGAG
AGTAAGTCAGTTAAGGAGAGACAAAAGAAGGTAGCCAATTTACTTAAAGAGACAGACGGT
AAGAAAACTGTCATTGACTCCTTGGAAAAAAAGGTAAGCAACATTCAAGGAGAATTAGAA
CCTTCAGAACAAATGCAATTAGAATCAGAATTATCTGAATTGTCGTCAAAACAAAAACAA
CTTGCTAGTCTTATTAAACAAGAAATCGAGAGACTTGGAGCATCCACAGAAGATAGAAAG
AAACTTGAAAATGATATAGAAAAAGCAAAGAACTGGCTCAAGTCTAAACTGGCTGAAATT
AAGAAACTCGGAGGATCAGTCCCATTGGAAGTTGCTAGAGTAGAAAAAGAGATTAATGCC
CATAAAAAACATCAATCCGAATTGTCTGATTTCCATAATGATACTTTAACCGAAGTCATG
CGTCAAGGTAACGCTGTATCTAAGGACTGTTCACCTGAAGACCGTGCAAAGTTACAATCC
ATTTTGGAGGATCTAAACAAATCATACATGTTTGCTAAAGTTGACATCGATGACAAATTA
GCAGCATTAAATAAACTACTACAAGGCAGAAATGAATTCGAAGCTGAAGTTGCCAAATGC
CAGAGTTGGCTCAATGAAGCAGAAGTAGCAGCTACACCGGAACTAAGAACATCAAACCTA
CAACTTCTTGAAGAACAGCTTCTTAAATATGAGAAACTAAGTAAGGAGGCAGAAGATGTA
GAAAAGATTATAGGTAAGATTAGAGATAAGTCTAAGGATATTATGGACTCTTTATCAGAT
TCGAACAAACTGCAACTCAAAGAACAAGTAAATATTCTTTCCGACAAATTTGCTAGAATC
AATGTCATTATAAATGACAAGAAGAATATATTAATAAAACATATCAAGGAATACAAAGAC
GCTGCAGGCAAGATCGCTGCTGCTAAAGAATTCTTAAATGAAATCCAGAACAGGCTTAAA
GCTTTGAACAAACCTATTGGAAGTAAAGTTGAAGATGTCCAGCCCGTTATCCAAGCATAC
GAGTCGATATTGGCTGACTTAAAGAAAAATAAATCAATGTTGAATGAATTACAAGGCGGT
AATCTTAATGATCTCCAAGACATTCTCACTCAACAAGATGATTTAATGAGCAATATTGAA
GATCAAATCGCTAAACTTAAGCTATTGCTCCTATTGCGCGAGCAATTCTTCGCTCTTGTC
AAAGAAATTGAGGAATTCATCTCTAAATACACAGAACTTACATCTGAAATTGAGAAATCA
AACGATTCTCTGGAAGACAAGATTAAACGTTACGATGACATCATTGTTAAAATTCAAGGT
TGTGAAGCTCTGCTTGCAACTGCCACCGATAAAGGTCAACAAATAGCTGCAGAAGGTACA
GTTATCGACAGAAATAATATAACTGAACTTTTGCAGTCATTAAAACAACAACTTTTAACA
TTAAGGAGAATCGTAGAGTCAAAGAGACAGGAACACGAAAGAGCTGCTGCTGAACATAAA
AAACTGGCATCAGATCTGTCTGAAATATTAGAGTGGCTACACGACAATGAAGCTACTGTA
CATTCAAGACCGTTATTGAACAGAGATGTAGCTAGCGTTGACAAAAAACTGATTGAACAC
GCTACACTTGTTAAAAATATACAATCGAACCTCGATAAATTTACAAAGTTAACCGAAAAC
ATCAAGGGCGATGACGGAATACCCGGAGCGTTGGTAGAGATGATCTCCGAAGGGAATTCC
CTGAAGACTTCATTGCCGGCGGAACTGGCGAACAGGGAGAAATATCTTCAAGACAACAAA
AAATACAGACAGCAGTACTTACAACTTGTTGAAAAACTGAACATATGGGTGAACGAAGCA
AGTATACGGCTCGACATGGGCAAGAATGGAACCGACTTCGAAAACATCGAAGCAGATTTG
GAAGAACATAAAACATTCTTCAATTCTTCCGAACCTGAAATGAAAGATTTAGTCGGAAAG
AGAATGCAAGATATCGTGGATAAAATTTGGGCCTCCCTTGCCTCTTCCGAGCAGGAGGAA
CTCTCCAAAGACCATCAGAAGCATAACCAACTGTTAAAGAACACTTTGAACTCTGCTAAA
TCTCGTCAAGCTCAACTTGAACAAGATCTGGAGATCTGGAAAGACTTCTGTCAACTCATC
GAGAAGATCAAAGCTATTTTGGACAAGAACGATATTCAAGATGAACCCATCACTTCGGTG
GACGCACTAAGACTGCACTTGGAGAAATTGAAGCATGCCAAGAATGATCTTGAGAACCAG
CAGCCGCTCTTGGACGTAGTCCGGGAGCGAGCTCGCGAACTGTGCTCCGGCGCTGATGCA
GCCAGCGGTGAGAGGGTCGAGCAGAAGACCAGGGAACTAGCCGACAGGTGGAACGTTTCC
TGCGAAGGTCTTGCTAAACGAGCAGCAACCGCTGATCAGCAACTTCAACGTTGGACCCAG
CTTTTAGAAGCACAGAGGAGCTTGGCGGCTGCCATTACAGCGGCATCAGACCGTCTTAAG
CAATTGGATATCAACCCAAGTACCAGGAGGCGAGCTTTGGACACCAGGCACGCATTGCAG
GAACTGCAAAGCGACGTGTCCAGTTTGGAAGACAGCCGGGATGAGTTACTGGAACACGCC
GAATACGTTGTGAATCTACTTAGGGTTCACTCCAAAGATGCTGCCGAAGAGAACGACAAG
GCCGTCAAAGATCTCGTCGAGGCGTACGAGAAATTGCGACAGACTCTAGCGGCGCGGCTC
GCGCAGATCGACGACATAGTGTCAGAATTCGATCGTGTGTCAGAAAGAATCGACGAGCTC
CGACAACTGATAGAGGTCTCCATCGCTAAAGTTAGAACTTTTTACGTTTTCGGTGAGGAC
GAGGAAGACAACGTTCGATCCCTTATTACCGAAGTTTCGGAATTAGTCGAACGCACGAAG
AACTTTACAGAAGAAAGCAGGAAACGCTACGGGGGTTCCGCCCCGGCGGACGTGGCGCAG
GAGCTGTCTGCTTTAGAACTTTCATCTGAAGCTCTGGCCGCAGCGATGGAAGAAAAAGAA
AGGGAATGGAAGCGTGCGAGAACGTCTCGCTCAGAATACGCAACTGATGTAGAAGACGTG
CAAGCGTGGATCCGTGCTGCAGAATTGACAGCGCGAGACCGCACTTTACCACCTGAATCT
TACAGAGAACGCATTGTCACGACCAGATCTGAAGTGCCAAATATTACTGACCGTGTGGAG
CGACTGACACGTAATGCGCGCGCCATCGTTGAGGGTAGTCGTGATGCGGGTGAAAGACAG
TTAGTCCAGTCAACTGTGATGGCACTATCGGAACAATTCGCGGCTGTGTGTAGTGAGCTG
GAAGCGCGGCAGGCTGCCGTCGAGGATGCATGCGATGCCGTAGCCAGATTTTTAGCCCTT
TTAGAGAAAGTTCTGTTATGGGTGGAGACTCAACGCGCATTCCTAGCGCGGCCACTCCCA
TTGGCCGACTTGCAAGAAGCGCAACAGAAACAGACTGAATATGGGAATGCACTCAAGAGC
TGTAAGCAGCAAGCCAAAAATTTAGCAGATATGGCCAAAGAGATAGAGGCGATTGAACGT
GTCACGAGCCCCGGGGATCTTCCCTCGAGGCTAGAATCAGCAGAGAATGCTACCGTAGAT
GTTGAGAAAAGATTGGCGAAGACGAACGGACTTCTGCAGGAACTAGCGGAGGAATGGGAG
AGATGCGAAAAGAAACTTAAAGACGTCGGCCACTGGCTCGAAGCAACTTCAAGGACGCTT
GAAGCGCCCCAGAATGCGAAGAAGCCACTTAGAGACAGGCTGGCTGTTAGGGAAAAAATT
ATAAATGATATCTCAACACAGAAGACAAAAATATCATATGCAGTCGAGAAACTCAATGTA
CACTTCGGACCGGATGGCGTTGCGGCGCAGTCACAGGGTCCAGTGGGGGTAGAGGCGAGC
GCGCAGACACTAGTGAGCTCACTGGATGCACTGGACAGCACGACGGGTGCGCAGGCGCGG
CAACTCGGTGCCGCATTGGCGCAGGTGGAGACCTACTGCGCGGACGTGGCGGCGTTGCGA
GCGCAGCTGCTGCAGGCGGAGCAGCATCTGCGTCACGCGGCGCAGCCCAACTACAGTCCG
CGTGACCCTGAACGAGCACATCGTCATCAACAGGAATGCCGCGAGCGAGTCAAATCGCTA
CAAAGCAAGATTCAGGCGCGAAACGAGCGAGTCAAGTTGTTAGTGCAGCGCGGCGTTCCG
GACGCCGATCCGCTGCGGGACGTATAAATCGTTATAAACGTTCTCGTTTAGTTTTAAGTT
GATTCATTTCGCCTTCTGTAATTTTTTTAAGTATCACGTAAATTTACGCTAAAATACACA
CGAAACGTCGCAAAA
(5235 bp)

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