SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29348_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nesprin-1-like_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:1.17 TPM:1.17
ORF EntryO_SariMG11346_internal:A_SariMG_comp29348_c0_seq2
Sequence
(Nucleotide)
GCGGGATCGGCAGCGGCGCGGAGTCGGCTGGCGACGAGGGACGGGATACCGATGCCGCTG
CAGCAGAGCATGCGGCCACTGCGGCTGACAACCGACTCTTCTCTGTTTGCAGGCGGTTAT
GAAGACCCCTAGCTTTGTCAAGCAGATCTCGTCCGTGGGAAAGTCCATCAACTGGAACGT
CAAGTTCAGTGATCGCCGGTTCGCATTCATCCAGATTATTCAAAATACTCTCAAGCGTGT
CTTCGTATTCCTTGAACTTCGCGAGACCCTCCCTCAAGCGCCTTTCGATTTGCAGCGCAG
TGGTCAACAGAGACTTGTGACTGTCATTAACATTCTTTAATTGCTTTCCAACTGTGTCTC
GGATAGACGGAGTCGTTACTTCATAACGCTCGATTTGTGCATGTCCCTTGCCCTCTAACT
CGTCAAGGGTAGACCTATACTTTTGAATATCATCAAGAAGTATAGCATGCTGTGCCAACT
GCTCTTCTGTTTGTTCTCTATTAGCAATGTACAAAGAGTTATGGGCCATGAGTTGGAAGG
AAATTTGCAATAGCCATTTTTCAGTATCTTGTAGCGACTGATGGTATTGGTTATAGTCTT
TGATTTCGTTCTCCAGCTCAGCTTTCTTCGCTGTGCACTTGGCTCTCAACGCTTTGCATT
TCTTTTCGATTTCTATAACATCATCTTTGACAGCCGGTTTCTTAGCCCAGCTACTCAATT
CAGCGGCTTCAGTCTTCAGTCTATCTAGCTCAGGTTTCTTGTTATCGATTTCTTCTTCAA
TGTGCTTGTATTTTTCCAGGAGAGTTTTCATTTCACCTAATTCTCCACCAGTAGGAGGAA
CTTTATCGAGGTTCTGTTCCATATCCTTAATCCATTGATTCATCTTGTTTTTACTGTCTT
CAAAATCTTCCCATTTACCAATAGCGACTTTGAGTTGTGTGGTAATAGAGTTGAGGTCGA
TCTTCAATTGGTCCCAACTTTCTTGTAAAACTTTGACATCGTTACGTAAACTGTCTTGTT
CTTCTGGAGGTGTATTGTTTACAGCTTTCTTAAATGCTTCTTGGAGGACAACAAGGAGGT
GATGACCTTCAGTCATTCTATTGTTAACAAGTTTGACAGTTTCCAATTTGTCCTTAGTGG
TTTCAATATCACCAACTCCAATAGAATCTTGTACTGTGCCGTGAGCTGTCTCTAACCACT
TCTGTAAATCTTCTTTAGCTTTGATAAACTCAGTGTGATCTGATAAGTTCTTCTCGCCGT
TAGAAACAAGACCTTGTATTTTAGTTAGCAAAGTCGTGTACTCTGTTTGAAGGTTAACAG
TCTTATCACGTACCCAAGCACAAGCGCTTTGTTCCATAAGGTTTTCACATCTATCATTAA
GTTCTTCTAAAATATGTTTGTGTCCCAATGCCTCGGCAAGTAATTCCCGACATTTTTCTA
GATGCTCAGGTGTAATCTTGTCTACTTTGTCCACAGTCTTCAATTTAGCATCAAACTCTT
TAACCCATTTACCCATCTTCTCCGATGTCTCTAAGTAATCCGACCAGGCAGATAAACATT
TCTCTAACAATTTCTTTGTATCCTTACAGACCTGTTGCAAGTTCTCCCATTCGATCTTCA
GTTGTTTAATTTCCTGGTTAATATTGTCTTTTCCTTCGTTTCCTGTAGTCTGTAGCACTG
CCTCACTCAATTTAATCGCTTTCTGAAGTAAGGCTTCACCTTTGGGTAGAGATTCAGTAA
TTTTGTTGACTTTCTTCAGTTTCTTTTGCACAGAGTCTTTTTCGCCGTGGGAATCCGAGC
ATTGTTGGATTTCAATCTTGCAATTGCGAATCCAGTCGTAGAAATTGTCGTATGATTCTT
TATATTGAATATGAGAGTTGACATAGTCTTCCAATTTAGCTATCATTGCGTTGACAGTCT
TCTTGATTTCATCATAACGTTTGAGCGTGTCCTCGATATCCTTAGACTTCAATGAAGTAT
CCTCCTGAAGTTTCTCATTCAACTTTTTAACTAAATCGCTGTGCGAGTCAATGTCCCTGC
TGAAAGTTTTAAATTTCTCCAGTTTCGCTTTTTTTTCAGATAAGTCGTTAAGTAAGGAAT
CATCTGATTGTATTTTCTGGTCAATGTCATTTAGCCATTCCACTAAAAGTTTGTGAATCT
TTGAGATATCATCAAATTGCGATGCTCTCTGCGTCAGTTTATTACGCACATCTTGTAAAT
CTGCTATTAGTTTATCGAATTCTTGCTTCAAGTTGTCTGTATCCTCCTGAATCTTCGCTG
CTCCCGCCTGTTCCGTATTCATTATTACCTTCTCTTTTAGTTCTAGAAGATATCTCAGCT
TGTTCTGTCCTTGCTCTAGTGACTGGCGCAGTTGTTTTACGGTATTGAGTTTATTGTTCA
CCTCTTGTAATGTATTAGGTATTTCAGCGCATTGGTTGAGTTTTTCCCGTGTCCTATCCA
ACCAGTCTTGACATTCTCCATATAAGGCATTGTGTTGCTGATGTTCCTGGTAATGGAGTT
CAAGCCTCTTCATGACCTCCTTAGCCAACGACAGCAAAGCATTGTACTTGGTGGTGAGCT
GTGTAATACCATTGGATATTCTCGTATCGGCACATGTTTCTAATAACATCTGGGCACGAA
CGTTCAGTTTGTCCAATTCCGCTTGCCAATCGAATAAGGTTTGTAAATGTCCTTGGAATT
CTTCTAAAACAACTTTCTTCTGTTCCAAATTATTCTGCAATTTATTAAATGATTGAACTA
ATTTTTCAGTCTTAGACAACCAATCTAGGGCTTCCTTATATTGCTCTTCGTATTCTGTCC
ACTTTACGATACCTCCCTCTATGACTGTTTTAGTGCTATTTAACTGCTCAACATAGGTAT
CGTACTCCTCTTGCATAAGAGCTACTTCTTCTTCGATGTCTTCCCTATCTTCATCGTCAG
CTAAGCCGCATGCGATCTCACCCTGTTGAAGCGCTTTCTGCAATTTCGCTTGACCCTCGG
GGAGCTCACTTTCTAAAACCTTTAGCTGTGAAATTTTGCTGCTTAATGATTCTTTGTCAC
CGGTAGCATCAGAACATTTTCCTAGCCTCTCCTTAGCAGCTCTTATCCATTGGACAAAGT
CTGATCCAGCATCGATGAACGCCTGGTGTTGTTCAACTGTTTCTTTTTGCTTCTCATACA
AATCTTTAGCTTGTTTCGTAAGAGTCTCATATTTAGTAGTAATCTCAGATGCTGGAGCTT
GTTGCATTAATTCTGAAGCCTTAGAAGTTACAGACTGAATCATGGGCTCAAACGAAACGA
TATCTTGTACAATATTGTTTGTTTGACGAAGTGTCGCTTTTCTCTCTCCTAAATTGAGGC
CTGTTGTAAGTCCGGCGAGGCGGTCTTGGCCTTTCTTTGATTTGGCGATTTTTTGTTCAT
ATACTTCTTGCAGTTTAGCCTCCCTGTCAGAGATCCATTGTTGGAGTTGTGAATAACTGG
AACTGTAATCAGCCCATTGGAGAAGCGAAGTTTCAAGATGAACTTTAGCTGTTGTCATCT
TTTTAACCAGACGATCCCATTCATTTTGAAGTTCTTTTAGTTCAGTATTAATTTTATCCT
TGCCATCAGATCTTGTATTTCTGAGCACTTTTTCACCGCTGTTTATAGTAG
(3651 bp)

- SilkBase 1999-2023 -