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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29347_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:5.47 TPM:5.49
ORF EntryO_SariMG11339_complete:A_SariMG_comp29347_c0_seq4
Sequence
(Nucleotide)
CACTCACGCGCCTCAGCTCGCCATTGCTTCACGATCGAACGACCAACGCCCGTGCCTGGT
GTCGTATTACTACTCTAAATATATCTCGTGAGCGCGATCGCCAATTTGGAAACGGTCGTG
CGCCGTGTTTTGATCCGGTGATTGACAGTGCCGACTGAAGAGTACTCCTTCTCTGAACCG
ACAAGGCTCGCACTACAGACATGGCACAGTTGATAACTGTGCGGGTTAATAAATCCGACC
ACCAGCCGCTGGGAATCAGGCTGCAGGGTGGCAAAGACTTCGGCACACCACTTGTCGTTC
AAAAGGTGAATGGCGGTAGTCCAGCAGAGCGAGCTGGTCTACAAGCTGGAGACGCGCTTA
TCCGTGTGAACGCCACTGACGTATACTCACTAAGGCATCAAGACGCACAAGACGCTATAC
GTGGTGCCGGGTCTGCTATAGAACTCACCATACAACGTGGTGGTGGCACATGGCGCCCTA
CGGTGACTCCAACCGGCAGTCTGCCTAGACCTGGTTCACGTCCCCTTGGTGCGGCACCAA
CGCCCGTCACCAACACCTCTTTGAAAGCGACGCAGCAGCCCACGCGAGCTTTTGGTTCAG
GCCACAACAATGTCGCAAAGCCATTTGGTTACATGAACGGTAATGACCCTGTGAAAAGCA
TAGTCAACAAACAGTACAACACGCCTGTAAACATTTACAGTGACAAAACTATTGCCGAGA
CACTCTCAGCTCAAACTGAAGTACTGGCTGGTGGGGTGCTGGGAGTCAACTTCAAAAAAA
ACGAGAAGACTTATGACGCGGAAAAGAGTGCAGTTTTCAAAGTTCTTCAAGAAGAACAAA
ATGACCCGGAACCAGTCGAAGTGCCGGCGGCGAGCTCCGTCCCGGCGCCGGTGAGCGGTC
TCCGGCACGTGCAAGCGCCCGTCACGCGACCTGAAGCGCCTCTCAACAACACGGGCGGTT
TGCCTCCCGGACAGAACATTTGCGAGGAGTGCGAAAGGCTCATAACCGGTGTGTTCGTAC
GCATCAAGGACAAGAACCTTCACGTGGAATGCTTCAAGTGCTCGACTTGCGGCACATCGC
TGAAGAACCAGGGATACTACAACATAAACGGGAAACTGTACTGCGACATACACGCGAAGT
TAGTCGCACGCCAGAACCCGCCCGCGCCTAACCTCGAGCCGGTCACCGTGCCACCTGGTG
CACGTATTCCGAGTAATACATACTCCACTCCGTTGCCGCCATTATCTACCAACAACTACA
CCAATGGATCTTCTTCACTCTTTAGTCCATCAAGTAACTTGTCCGGACCTAAGCCATTCG
GATCGTCAATCGGGTCTGCGTACTCGCCGTCGTTGTCTCCCCGGTCGGGGCCGATGTCGC
CGGCGCGGCCTGTGCCAGCGCCTGCATCGGCGCCCGTACACGCGCCTGTACACTCGCCCG
CTGCGCCTGCACCGACATTCGCACCTGCAGCTCCGCCTCAACCACCATTCGCTCCTAAAT
ATCCAGTTTCCATTTTTAAAGGTTCGAGTGTAGGAGTTACTCCTCGTGGTAAAACTTTTG
GTGTATCATCGGCCCCAAAACGAGGACGTGGAATTTTGAATAAAGCTGCACTTCCCGGCT
CCCGCGTGCCTCTTTGCGCATCCTGCAATGGAAACATTAGAGGGCCATTCATTACGGCAT
TGGGACGCATATGGTGCCCTGAGCACTTTATTTGCGTGAACGCAACTTGTAGACGCCCGT
TGCAAGATATTGGATTCGTCGAAGAAAATGGTCAACTTTACTGCGAGTATTGCTTCGAAC
AGTACATTGCACCATCTTGCGATAAATGTCACGCCAAAATCAAAGGTGATTGCCTGAACG
CTATTGGAAAACATTTCCACCCTGAATGTTTCAACTGTGTCTATTGTGGAAAACTATTTG
GCAACAATCCGTTCTTCTTAGAAGACGGATTACCATATTGTGAAGCAGACTGGAACGAGT
TGTTTACGACGAAATGCTTCGCTTGCGGGTTCCCCGTGGAAGCGGGCGACAGGTGGGTCG
AGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCACGGTGTGCAAAAAGAACC
TCGAAGGACAGAGTTTCTTCGCCAAGGGAGGTCGACCTTTCTGTAAAACGCACGCCCGCT
AGATCACCACAAGTTATCTATAATTCCGACACTGTTTATTCGACGATTACTTTTCGCCCG
GTTTCACCATCTCCTATCACTTCGCCTCCACCTAACTCCCCTTTATTGCGCAGAACAAGA
AAACTGGAAACACCCCTCCACTTCGATGGAGGATTGTTTTCCGATATTAGAAGCACAGAC
GGAAAATTACTAAGCAAAGTAACAGTGGATAAAGTGCTGAGATCAACACACCATGATATT
ACTGACTCTCCGAGTACTGAAGTGCATTACGATGAAAGAAATTATGTCGATGACATAACT
AAAACTGAGATGATAACTAATAAAGATGTAATTACAGTAAAATTCACGCCAGTACAACGC
GAACTTGAATCTCCGGACTTCTTGTCGACTATGCAGGAAAATCAGACCCAAGATAGTAGT
GTCACTTCAGTGGAATATATAAAGGATGATTTTAAAGATTTACAAAGTTACAAAATAGTT
AATTCATTATGCAAGACTAAATTATTTGAAATGCAACAAACAGATGATAATAAATTAGAT
ACGCCAAATACAGAGAACTGTGTGAAAGAGGGAGCAGATAAGTTAAATATGTCAGTATGT
ATGGACAAAGAGTACAGCCAAATGAAAAGGACTCCAAATGTTGAACTATTATCTGGAATA
GAAAAAGATAAATTAGATATACCGGATACAACTCACATAGTAAAAGAAGATTCAAAAGAA
CGTAGTATCACAGTATTCAACAACAAAGAACATAGTCCCTTGGCTAACTTTTTAGTCTCT
GAGCAATTGTCTAGAATAGATAATAAATTGCAAGAGAGTCTGCAGACATGTTTCGGCGTT
GATAATAATATAAATTTTACAGCACAAAACGAAGCAATCAATAAGAAAAACGAAGTATGT
GAATTAGAGCAAGATTTTGAACAAAAATCAAATAATTATATTAACAGTTATCCAGGCGAA
GTGATTCGAGAAATCGGTGGCAATCATGACAAGTTTGAAACTAATAAAAATGCAATAGAT
ATAAGTAAGTTGAAAGCGAAATCGAACAGTGGCCGTAACAAGATTTTCGGATTTCTGCGA
AATATTTATAATTTGCCTATACATTATCACGCGGCAATTTTATGTTTCTTTTTAATTGTG
TACAACCTTATATACCAGTACATTAAGCAAAAATATGAAAATAATAAGAAATTAACGTAA
TATTAAGGATATATAATCAATAAAAGTGTATGCGTTAAACTAGTCATTGCATAATTATTA
TTGTTCATAATTTGTATCTATTCGGTAGGTACATGTATTGTTTTTTTTTCCATTGGACGT
GATGTAAATAGCGACGGATAACCTCTGTATTTTCCATCAATTTTATTTACTTAACATTTT
GGTGCTTTTCTTATAAAATTGTTCACAAATTTATATTGCTGCTTGTCATTTCCTCTAAAT
AAGGCTTTGTACACAGCTTACGGAATGTTCTTGAACTGTTACTAACAACTCTACAGTCAT
TCTTAATTGTAATCAATCAATATTATTATTTAGTCCAAAAGTACATATTTTAATTTAATG
GTGCACCATAATTTAGTTTACCTTAGATTATAGGTATGTAACGTTTTTTTTTAAATTAAA
CTTTTATGTTTATTATAATGAAAAAAATATAATTTTAACATTAAATTGTGCCATTTGTTT
TTCTGTCTATAAATCTTGATCGTGTACACAAATTTTTGGTACGTATAAAGAGAAGTTTTA
TTGACATACAAAAATTAATTTGGACAATACGGTATGAAATGTAAGCTTAAATTAATAAGG
ATTATTTATTTGACTCCCTTTGACGCAATTATTATAATATGTAGGCTTCACAATATTGAG
CTTAATAATAAATATTTAATTTTTT
(4045 bp)

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