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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29347_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_PDZ_and_LIM_domain_protein_Zasp-like_[Plutella_xylostella]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.71 TPM:0.71
ORF EntryO_SariMG11335_complete:A_SariMG_comp29347_c0_seq3
Sequence
(Nucleotide)
CACTCACGCGCCTCAGCTCGCCATTGCTTCACGATCGAACGACCAACGCCCGTGCCTGGT
GTCGTATTACTACTCTAAATATATCTCGTGAGCGCGATCGCCAATTTGGAAACGGTCGTG
CGCCGTGTTTTGATCCGGTGATTGACAGTGCCGACTGAAGAGTACTCCTTCTCTGAACCG
ACAAGGCTCGCACTACAGACATGGCACAGTTGATAACTGTGCGGGTTAATAAATCCGACC
ACCAGCCGCTGGGAATCAGGCTGCAGGGTGGCAAAGACTTCGGCACACCACTTGTCGTTC
AAAAGGTGAATGGCGGTAGTCCAGCAGAGCGAGCTGGTCTACAAGCTGGAGACGCGCTTA
TCCGTGTGAACGCCACTGACGTATACTCACTAAGGCATCAAGACGCACAAGACGCTATAC
GTGGTGCCGGGTCTGCTATAGAACTCACCATACAACGTGGTGGTGGCACATGGCGCCCTA
CGGTGACTCCAACCGGCAGTCTGCCTAGACCTGGTTCACGTCCCCTTGGTGCGGCACCAA
CGCCCGTCACCAACACCTCTTTGAAAGCGACGCAGCAGCCCACGCGAGCTTTTGGTTCAG
GCCACAACAATGTCGCAAAGCCATTTGGTTACATGAACGGTAATGACCCTGTGAAAAGCA
TAGTCAACAAACAGTACAACACGCCTGTAAACATTTACAGTGACAAAACTATTGCCGAGA
CACTCTCAGCTCAAACTGAAGTACTGGCTGGTGGGGTGCTGGGAGTCAACTTCAAAAAAA
ACGAGAAGACTTATGACGCGGAAAAGAGTGCAGTTTTCAAAGTTCTTCAAGAAGAACAAA
ATGACCCGGAACCAGAGCCTTCTCACTTTTACTCGCGAGCGAGTGTGGCGCGAGTCGGCA
CACCTTGCAGCCTGCACAGCACGCACCGGTCGCGGTCGCGCACGCCGCGCGTCGGTTTCA
CGCCGCAGCCGGCGTCGCGTCCGGCGTCCGCGCCGGTGCGCTCTAACACCGGGACTCAGA
CACCGGCACGGGAACTGCTGACGACGCAGCCGGCACACCGGCCCAGCATACCGGTCGGGT
GCCACGAAGTACTCCCGGACGGACGCATAGCACTGGGAGCGCCGGCCAGCCCGCAGCCGC
AGAACACACCGGTGTCGGTCCTCAACGACACTCCCTATTGCTCCGATTGTAGACGCTACA
TTATCGGTGTGTTCGTACGCATCAAGGACAAGAACCTTCACGTGGAATGCTTCAAGTGCT
CGACTTGCGGCACATCGCTGAAGAACCAGGGATACTACAACATAAACGGGAAACTGTACT
GCGACATACACGCGAAGTTAGTCGCACGCCAGAACCCGCCCGCGCCTAACCTCGAGCCGG
TCACCGTGCCACCTGGTGCACGTATTCCGAGTAATACATACTCCACTCCGTTGCCGCCAT
TATCTACCAACAACTACACCAATGGATCTTCTTCACTCTTTAGTCCATCAAGTAACTTGT
CCGGACCTAAGCCATTCGGATCGTCAATCGGGTCTGCGTACTCGCCGTCGTTGTCTCCCC
GGTCGGGGCCGATGTCGCCGGCGCGGCCTGTGCCAGCGCCTGCATCGGCGCCCGTACACG
CGCCTGTACACTCGCCCGCTGCGCCTGCACCGACATTCGCACCTGCAGCTCCGCCTCAAC
CACCATTCGCTCCTATTACTGAACCACAAACTACGAGTAGTCCATATAAAACAGAATACA
AAAGCCAAGCAGAGGAAAGACTTATAAGGAAAATGGCTAAAATGGCTTTAAATGGTTATG
AGATTGGCATACAAAGAAAAATTAAACCAGCTGACCACATACAATCTATGGCTGATAGAA
TCCAGGATACCATAGTTACTAAACACCCTTTGAATGCTGATGGCACATCTTCTGGCGAAA
ACAGTCATGATAATACTTTAAAAAGATCGCCTAACAAGATATCAGATCAAAGTTACAAAA
TGTATGATAGCATGATGAGTATTGGTGATAAAGTAAAGGATATAATATATAATAACGAAT
TAGAGAAAAGTAATTTTAATGATAGCGTAGCTGTGTGTGGTAGTGCACCAGTTCCTCCAC
CGCTGCCTACTTCTCCCATGCCTCTATTTAATATTCATAGCACACCTACTGGACATATAA
CAGCTCAAGCCAATATAAAGAAACAATCAGATAGTTTTCCTAAAAATTTTACAAGTCATA
TTACATCAACTGCTGAGTTGGAAAATAATGATAAATCATTAAATGGTAGCGATTACTCTA
GTAGTGAAGACTCCAGCAAAGAAACGAATACATTAAGAAATAAATCATATGAAAAATCAT
TTTTAAATAGTTCTAACATAAACCAAGATGTCAAAAAATCTGAATTAGTTCTTGATAATA
ATTTCTACTCTAACACATTAAATAAAAAGAAAATATTCGAAAACAAGGACCTTACAACAA
CATCATCCAATTCAGATAATGGCTTAAGAGCTGGTAGTTGCGTGACAAATACATTGGATA
CAAATACTAAAAACAGAATCAATATTTTCGAGATTTCTACGAGTTCCGAAGATAAAATAA
AGAACCATCATCAAAATGGCGAAAACAAATCCTTTTCTAGTAACTTTAACGACCTATCCT
ATAATTTAAGCAAATGTGACAACGATTCTATAATTGATATTGTTAAACAAGACGATGAAG
AAATACTTCAGCCTGAGGGTATAAACAATGTTAAAGACAACACAGAACCGGAAGTCCTGG
TTAAAAGACGCCAGAAAAAAACTAATCGCAATGATGATGGGAGAAGAGATTCTCATATAA
TTGCTAGACCATTGAGCACAATGACTTCGGTTGACGTGACGGATGGACTTTATCCAGTTT
GTCATAAATGCGATAAGGAAATAACAAGAGGGCCATTCATTACGGCATTGGGACGCATAT
GGTGCCCTGAGCACTTTATTTGCGTGAACGCAACTTGTAGACGCCCGTTGCAAGATATTG
GATTCGTCGAAGAAAATGGTCAACTTTACTGCGAGTATTGCTTCGAACAGTACATTGCAC
CATCTTGCGATAAATGTCACGCCAAAATCAAAGGTGATTGCCTGAACGCTATTGGAAAAC
ATTTCCACCCTGAATGTTTCAACTGTGTCTATTGTGGAAAACTATTTGGCAACAATCCGT
TCTTCTTAGAAGACGGATTACCATATTGTGAAGCAGACTGGAACGAGTTGTTTACGACGA
AATGCTTCGCTTGCGGGTTCCCCGTGGAAGCGGGCGACAGGTGGGTCGAGGCGCTCAACA
ATAACTACCACAGTCAGTGCTTCAACTGCACGGTGTGCAAAAAGAACCTCGAAGGACAGA
GTTTCTTCGCCAAGGGAGGTCGACCTTTCTGTAAAACGCACGCCCGCTAGATCACCACAA
GTTATCTATAATTCCGACACTGTTTATTCGACGATTACTTTTCGCCCGGTTTCACCATCT
CCTATCACTTCGCCTCCACCTAACTCCCCTTTATTGCGCAGAACAAGAAAACTGGAAACA
CCCCTCCACTTCGATGGAGGATTGTTTTCCGATATTAGAAGCACAGACGGAAAATTACTA
AGCAAAGTAACAGTGGATAAAGTGCTGAGATCAACACACCATGATATTACTGACTCTCCG
AGTACTGAAGTGCATTACGATGAAAGAAATTATGTCGATGACATAACTAAAACTGAGATG
ATAACTAATAAAGATGTAATTACAGTAAAATTCACGCCAGTACAACGCGAACTTGAATCT
CCGGACTTCTTGTCGACTATGCAGGAAAATCAGACCCAAGATAGTAGTGTCACTTCAGTG
GAATATATAAAGGATGATTTTAAAGATTTACAAAGTTACAAAATAGTTAATTCATTATGC
AAGACTAAATTATTTGAAATGCAACAAACAGATGATAATAAATTAGATACGCCAAATACA
GAGAACTGTGTGAAAGAGGGAGCAGATAAGTTAAATATGTCAGTATGTATGGACAAAGAG
TACAGCCAAATGAAAAGGACTCCAAATGTTGAACTATTATCTGGAATAGAAAAAGATAAA
TTAGATATACCGGATACAACTCACATAGTAAAAGAAGATTCAAAAGAACGTAGTATCACA
GTATTCAACAACAAAGAACATAGTCCCTTGGCTAACTTTTTAGTCTCTGAGCAATTGTCT
AGAATAGATAATAAATTGCAAGAGAGTCTGCAGACATGTTTCGGCGTTGATAATAATATA
AATTTTACAGCACAAAACGAAGCAATCAATAAGAAAAACGAAGTATGTGAATTAGAGCAA
GATTTTGAACAAAAATCAAATAATTATATTAACAGTTATCCAGGCGAAGTGATTCGAGAA
ATCGGTGGCAATCATGACAAGTTTGAAACTAATAAAAATGCAATAGATATAAGTAAGTTG
AAAGCGAAATCGAACAGTGGCCGTAACAAGATTTTCGGATTTCTGCGAAATATTTATAAT
TTGCCTATACATTATCACGCGGCAATTTTATGTTTCTTTTTAATTGTGTACAACCTTATA
TACCAGTACATTAAGCAAAAATATGAAAATAATAAGAAATTAACGTAATATTAAGGATAT
ATAATCAATAAAAGTGTATGCGTTAAACTAGTCATTGCATAATTATTATTGTTCATAATT
TGTATCTATTCGGTAGGTACATGTATTGTTTTTTTTTCCATTGGACGTGATGTAAATAGC
GACGGATAACCTCTGTATTTTCCATCAATTTTATTTACTTAACATTTTGGTGCTTTTCTT
ATAAAATTGTTCACAAATTTATATTGCTGCTTGTCATTTCCTCTAAATAAGGCTTTGTAC
ACAGCTTACGGAATGTTCTTGAACTGTTACTAACAACTCTACAGTCATTCTTAATTGTAA
TCAATCAATATTATTATTTAGTCCAAAAGTACATATTTTAATTTAATGGTGCACCATAAT
TTAGTTTACCTTAGATTATAGGTATGTAACGTTTTTTTTTAAATTAAACTTTTATGTTTA
TTATAATGAAAAAAATATAATTTTAACATTAAATTGTGCCATTTGTTTTTCTGTCTATAA
ATCTTGATCGTGTACACAAATTTTTGGTACGTATAAAGAGAAGTTTTATTGACATACAAA
AATTAATTTGGACAATACGGTATGAAATGTAAGCTTAAATTAATAAGGATTATTTATTTG
ACTCCCTTTGACGCAATTATTATAATATGTAGGCTTCACAATATTGAGCTTAATAATAAA
TATTTAATTTTTT
(5293 bp)

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