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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29347_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.93 TPM:0.93
ORF EntryO_SariMG11327_complete:A_SariMG_comp29347_c0_seq1
Sequence
(Nucleotide)
CACTCACGCGCCTCAGCTCGCCATTGCTTCACGATCGAACGACCAACGCCCGTGCCTGGT
GTCGTATTACTACTCTAAATATATCTCGTGAGCGCGATCGCCAATTTGGAAACGGTCGTG
CGCCGTGTTTTGATCCGGTGATTGACAGTGCCGACTGAAGAGTACTCCTTCTCTGAACCG
ACAAGGCTCGCACTACAGACATGGCACAGTTGATAACTGTGCGGGTTAATAAATCCGACC
ACCAGCCGCTGGGAATCAGGCTGCAGGGTGGCAAAGACTTCGGCACACCACTTGTCGTTC
AAAAGGTGAATGGCGGTAGTCCAGCAGAGCGAGCTGGTCTACAAGCTGGAGACGCGCTTA
TCCGTGTGAACGCCACTGACGTATACTCACTAAGGCATCAAGACGCACAAGACGCTATAC
GTGGTGCCGGGTCTGCTATAGAACTCACCATACAACGTGGTGGTGGCACATGGCGCCCTA
CGGTGACTCCAACCGGCAGTCTGCCTAGACCTGGTTCACGTCCCCTTGGTGCGGCACCAA
CGCCCGTCACCAACACCTCTTTGAAAGCGACGCAGCAGCCCACGCGAGCTTTTGGTTCAG
GCCACAACAATGTCGCAAAGCCATTTGGTTACATGAACGGTAATGACCCTGTGAAAAGCA
TAGTCAACAAACAGTACAACACGCCTGTAAACATTTACAGTGACAAAACTATTGCCGAGA
CACTCTCAGCTCAAACTGAAGTACTGGCTGGTGGGGTGCTGGGAGTCAACTTCAAAAAAA
ACGAGAAGACTTATGACGCGGAAAAGAGTGCAGTTTTCAAAGTTCTTCAAGAAGAACAAA
ATGACCCGGAACCAGAGCCTTCTCACTTTTACTCGCGAGCGAGTGTGGCGCGAGTCGGCA
CACCTTGCAGCCTGCACAGCACGCACCGGTCGCGGTCGCGCACGCCGCGCGTCGGTTTCA
CGCCGCAGCCGGCGTCGCGTCCGGCGTCCGCGCCGGTGCGCTCTAACACCGGGACTCAGA
CACCGGCACGGGAACTGCTGACGACGCAGCCGGCACACCGGCCCAGCATACCGGTCGGGT
GCCACGAAGTACTCCCGGACGGACGCATAGCACTGGGAGCGCCGGCCAGCCCGCAGCCGC
AGAACACACCGGTGTCGGTCCTCAACGACACTCCCTATTGCTCCGATTGTAGACGCTACA
TTATCGGTGTGTTCGTACGCATCAAGGACAAGAACCTTCACGTGGAATGCTTCAAGTGCT
CGACTTGCGGCACATCGCTGAAGAACCAGGGATACTACAACATAAACGGGAAACTGTACT
GCGACATACACGCGAAGTTAGTCGCACGCCAGAACCCGCCCGCGCCTAACCTCGAGCCGG
TCACCGTGCCACCTGGTGCACGTATTCCGAGTAATACATACTCCACTCCGTTGCCGCCAT
TATCTACCAACAACTACACCAATGGATCTTCTTCACTCTTTAGTCCATCAAGTAACTTGT
CCGGACCTAAGCCATTCGGATCGTCAATCGGGTCTGCGTACTCGCCGTCGTTGTCTCCCC
GGTCGGGGCCGATGTCGCCGGCGCGGCCTGTGCCAGCGCCTGCATCGGCGCCCGTACACG
CGCCTGTACACTCGCCCGCTGCGCCTGCACCGACATTCGCACCTGCAGCTCCGCCTCAAC
CACCATTCGCTCCTAAATATCCAGTTTCCATTTTTAAAGGTTCGAGTGTAGGAGTTACTC
CTCGTGGTAAAACTTTTGGTGTATCATCGGCCCCAAAACGAGGACGTGGAATTTTGAATA
AAGCTGCACTTCCCGGCTCCCGCGTGCCTCTTTGCGCATCCTGCAATGGAAACATTAGAG
GGCCATTCATTACGGCATTGGGACGCATATGGTGCCCTGAGCACTTTATTTGCGTGAACG
CAACTTGTAGACGCCCGTTGCAAGATATTGGATTCGTCGAAGAAAATGGTCAACTTTACT
GCGAGTATTGCTTCGAACAGTACATTGCACCATCTTGCGATAAATGTCACGCCAAAATCA
AAGGTGATTGCCTGAACGCTATTGGAAAACATTTCCACCCTGAATGTTTCAACTGTGTCT
ATTGTGGAAAACTATTTGGCAACAATCCGTTCTTCTTAGAAGACGGATTACCATATTGTG
AAGCAGACTGGAACGAGTTGTTTACGACGAAATGCTTCGCTTGCGGGTTCCCCGTGGAAG
CGGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCA
CGGTGTGCAAAAAGAACCTCGAAGGACAGAGTTTCTTCGCCAAGGGAGGTCGACCTTTCT
GTAAAACGCACGCCCGCTAGATCACCACAAGTTATCTATAATTCCGACACTGTTTATTCG
ACGATTACTTTTCGCCCGGTTTCACCATCTCCTATCACTTCGCCTCCACCTAACTCCCCT
TTATTGCGCAGAACAAGAAAACTGGAAACACCCCTCCACTTCGATGGAGGATTGTTTTCC
GATATTAGAAGCACAGACGGAAAATTACTAAGCAAAGTAACAGTGGATAAAGTGCTGAGA
TCAACACACCATGATATTACTGACTCTCCGAGTACTGAAGTGCATTACGATGAAAGAAAT
TATGTCGATGACATAACTAAAACTGAGATGATAACTAATAAAGATGTAATTACAGTAAAA
TTCACGCCAGTACAACGCGAACTTGAATCTCCGGACTTCTTGTCGACTATGCAGGAAAAT
CAGACCCAAGATAGTAGTGTCACTTCAGTGGAATATATAAAGGATGATTTTAAAGATTTA
CAAAGTTACAAAATAGTTAATTCATTATGCAAGACTAAATTATTTGAAATGCAACAAACA
GATGATAATAAATTAGATACGCCAAATACAGAGAACTGTGTGAAAGAGGGAGCAGATAAG
TTAAATATGTCAGTATGTATGGACAAAGAGTACAGCCAAATGAAAAGGACTCCAAATGTT
GAACTATTATCTGGAATAGAAAAAGATAAATTAGATATACCGGATACAACTCACATAGTA
AAAGAAGATTCAAAAGAACGTAGTATCACAGTATTCAACAACAAAGAACATAGTCCCTTG
GCTAACTTTTTAGTCTCTGAGCAATTGTCTAGAATAGATAATAAATTGCAAGAGAGTCTG
CAGACATGTTTCGGCGTTGATAATAATATAAATTTTACAGCACAAAACGAAGCAATCAAT
AAGAAAAACGAAGTATGTGAATTAGAGCAAGATTTTGAACAAAAATCAAATAATTATATT
AACAGTTATCCAGGCGAAGTGATTCGAGAAATCGGTGGCAATCATGACAAGTTTGAAACT
AATAAAAATGCAATAGATATAAGTAAGTTGAAAGCGAAATCGAACAGTGGCCGTAACAAG
ATTTTCGGATTTCTGCGAAATATTTATAATTTGCCTATACATTATCACGCGGCAATTTTA
TGTTTCTTTTTAATTGTGTACAACCTTATATACCAGTACATTAAGCAAAAATATGAAAAT
AATAAGAAATTAACGTAATATTAAGGATATATAATCAATAAAAGTGTATGCGTTAAACTA
GTCATTGCATAATTATTATTGTTCATAATTTGTATCTATTCGGTAGGTACATGTATTGTT
TTTTTTTCCATTGGACGTGATGTAAATAGCGACGGATAACCTCTGTATTTTCCATCAATT
TTATTTACTTAACATTTTGGTGCTTTTCTTATAAAATTGTTCACAAATTTATATTGCTGC
TTGTCATTTCCTCTAAATAAGGCTTTGTACACAGCTTACGGAATGTTCTTGAACTGTTAC
TAACAACTCTACAGTCATTCTTAATTGTAATCAATCAATATTATTATTTAGTCCAAAAGT
ACATATTTTAATTTAATGGTGCACCATAATTTAGTTTACCTTAGATTATAGGTATGTAAC
GTTTTTTTTTAAATTAAACTTTTATGTTTATTATAATGAAAAAAATATAATTTTAACATT
AAATTGTGCCATTTGTTTTTCTGTCTATAAATCTTGATCGTGTACACAAATTTTTGGTAC
GTATAAAGAGAAGTTTTATTGACATACAAAAATTAATTTGGACAATACGGTATGAAATGT
AAGCTTAAATTAATAAGGATTATTTATTTGACTCCCTTTGACGCAATTATTATAATATGT
AGGCTTCACAATATTGAGCTTAATAATAAATATTTAATTTTTT
(4243 bp)

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