SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29320_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_MYM-type_protein_4_[Amyelois_transitella]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.38 TPM:5.40
ORF EntryO_SariMG11219_3prime_partial:A_SariMG_comp29320_c0_seq3
Sequence
(Nucleotide)
AAATTTTGTTGTGTGTTCAATTCTTTAAAGATCTAAACTATACATCCTTATCTTAGCGAT
TTGGTAGGGGCAGGTTGATACCAAAATGGTTGCCGTTTGTTGTGCTTTCAAGTAAATCGT
GGATTCGCTTCACCTTCATGTATCCTTCGTATTAAATTGACAGTATATTCCAATTGGATT
TGAAGTATGGATGAGAAAGATGGTATATCAGATAAACCTGATGATGGCAGTCAAGCGTCT
GGGGATGATCCTGGAACGACTGATCGTGAATGTGAATTAAAAACAGACAGTGAAATAAGT
GAACAAAAAGATGATGTTCTACAAAATCATGTTGACGATGTGAATACTGAAGACAGTGTT
AGTGTTAAAAGTGATGTGGACAAGAAAGATGAAGATTCTGAAGATGAGGAATGTCATGAT
AAGACTAACAAGGATGATAATATTGATGATACATTGAAAGAAGAATCAAACAGTCAAGAT
GCACCAGATTCAGAGTCAATAAGTCCAAGTAATGTTACTAGCCAAGATACTGTTACTCAG
GATGACAATGATAGAACATGTACAGATCAAGATGATGTTGGAAAACCAGAGTTTGAAAAT
GCACCTAATGTGTCTATTGATGAATCACAGGAAGACCACGAACAGGCATTTGACCCATTT
GATGCACTTTTAAAAGATACGCATGATACTCAACCTGAGACATCAAAATCTCAAGGTGTA
ACAATAAATATAGATGATGAAGAGGATGATCATAATGTGGACAATGTTGAGGGTGAAGTT
AACCGCGATGATGTTGAAGAACATGGACAATTGGATCAGCCAGGCGCAGATGAAGAGGTG
TGCCTTCTTCCAGACACAGAGAGAGAAATCACTGAAGCAGACAAAGCTGAAGCAGCAAAA
GTATTAGCAGAGAAAAAGAAACAAGCTGAAGCTGAAGCAGAAGTACTTAAGGAAGAAAAT
GAGGCAACTGATGATGGTCATAATGAAGAAAATGTTGATTCTGGTGAACATTTAGAAACA
GATACTGCTAATGAAGATGCATCCCATGAGAATGGAGATAAAGAAAAGGAACATGATGAG
AGTACTGAAACAGAAGACGCTGTTGTATATAATATAATCCAAGAAAATACTGAAACTGAT
AACTTCTGTACACAATGTAATCATGAAAAACCTTGTTCATTCCGATACATAAAAGATGGT
AACACATGTTATTTATGCGATGAGGATTGTGTTAAATCTTTTAAAGAAGATCACCCGGGA
CAGCATAATGTTATAGAAAAAAAATATATGATAGAAGAAATTCCACCAAAATTGTTAACA
TGCTCTGAATGTGAAGAACGGAAATTGTGCTACTTTTATTACAACTATGACGGTGAGGAT
ACGAACTATTGCTCCTTGAACTGTTTATATGGAATGATGGCCGACGAGAAAGATAAATAC
AGTTATAAACGACGAAAAATTACGATAGACGAAATCCAACCAGTGCAAGTCAAGTGTCTT
ATTTGCAACCAGTTAAGAGAATGCTCATACAAAATGATTAGATATGGTGAAAGTCATTTC
ATCTGTGAAGCAAGTTGTATTAAAAATTTGAACATAGCTGAAAATGGTAGATATATTATA
AGGAAAATGAGAGTGTCACGAAAGCAGACTCCTAAGAAGCAAGCTAATGCTAGTAATCCT
CCATTGCTTAAATTGAAAGTGATAAGTAATGCGACAGATAAATATTTAGATGAAGCATAT
AAAATACAAGCAAAGACACCCGCCATGGTACAGGCTGCTAGGGAAGAGAGGGAACGGACA
TTTTTACGTAGATGTAGTTTTTGCACTTTAATACTAGAAATGAACGAGAAGACTTTGATT
TGGGAGACGATGGATTTCTGCGACGAAGTGTGTTTAGGCCGGTATCAGAATAAAATCGGG
GCTCGTTGTGCTAACTGTAAGAATCCCGTCATACATACAAGTTTAGGAAAATATTGTGTT
AGGTTTGGTTACGATATACGACAGTTCTGCAATTCCGGATGCCTGGAAGAGTTCAAGAAG
GGTTTGAAAATATGTTGTTACTGTCAAAGAGATATATCAGTCGGACATCAAGGTTTCTTA
GCTCCCGTCGGTGATAAAGGTCAATTTAAAGATTTCTGTTCACAAACGTGTATGGAGAAA
TTTGATCACATGAGTAAGAATCCGACATCGCAACAAGTGTGGGCCAAATGTGCCGTGTGC
TCTTTGGAGAAAGTGACAAGTATTGAAGTAGAAGTCACAGAGAACAGTTCTCAGAGATTG
TGCTCGGATCCATGTTTTGCTGCTTTTAAATTTGTAAATAATATATTTCCGGATCAATGC
CAATGGTGTAAAAAGTATTTCGAGAGGAAACAATCAAAGTGTTTCACTATATATGATGAC
AGCAGTCCACATTGCTTTTGCTCCAAGGCCTGCCTTAACGTTTACATAAGCAACACCCGG
CATATAGTACCTTGTAACTGGTGCAAAGTCAAAAAGTACAATTTCGACATGATCCGACGT
GTCCAGGTGAACGGGCAAGCTGTTATGATGTGCTCTTTGAATTGTTTGAATCTCTATCAG
GTGTCTATTAACGCAGTCTCTTCGAGAAGAACAAAATGCGACATGTGTAGAAGAACATCA
TTAGCTCAATACCACTTAACAATGTCTGATGCAACCGTCAGGAATTTCTGCACTTACTCT
TGTGTTATGACATTTCAGGGTCAATATGCAAAGCATACACCGCCATTGATTCCTGGTGAA
TCGATAGATCAACAGAAGGCTGTTCCTACGGGATTACCGAGGCGAACATGCACAACCAAC
AATAATAAAAACAATGCACAGAGGAGCGGAACTTTACCGGTCATTTCAAGCGTTCAATCG
CTTGCAGCTCCACCACCTCTAACACCGTCAGTGACTCGAGCGAAATCCAAGAGGCTCGCC
AGCCTCAACCAACCACCCCCCGAGCCGGAACCACCCTCGACCCCGAAAACACCGCCACCG
CCGCCGCCCCCGAGACCGGTAACACCACCGCCGCCGCCGCCGCCGAAGATCTACAACCAC
GTTATAGTGAAAACCCTGCCACCGCACGAGGTGGCCAATAAAGGGACTATGGCGAAACCC
ATGACGGCATCGAAAGGTGTGTCCTGCCGTCCGCATCCCTGCACGAAGGAATGCCAAACG
GACCCTAGTTTGGAGCGAAGAGTCCTGATCCCAGTCCCCGTGCCGATATACGTACCGGTG
CCGTGTGTTATGTGGTCGCTCCCGTTCCCGGTGCCGGTGCCCATACCGATACCGATACCG
ACGCCGGTATTCATACCGACGACTAGGAATTCCGCCAAGGGTATAATGAAGGAGATCAAT
AAGATCCACGATAAGATGCCGACGGATCCCTTCGAGGCGGAGTTGCTGATGATGGCCGAG
ATGGTAGCCGGTGATAAGAAAAAGGACCAGAGTGACTCGGATACCGATGATGATAATGCG
GAAGAAAGTTTCAGTCCTGTTGGTGGCATAGACGGCAATAACGCATTCGGTGAAGATATG
CTACAGATGGCATTAAAAATGGCCACTGAATACGAGGACCAACCTGTAGACTTGGAATCC
GCCATGACAGCTAATACTATAACACCCAGCTCGCATCCCGGGATGCCTGGTTTGGAAGGT
GAAGGTATGCACCACCATCACATGATGGTGCTTGAACAGCAACGTGCTGTGGCGGCGTTG
CGCGCGTCCTCGGGCGGCGCGGGGAGGAAGCGCGCCCCCGCAGCCGGCGCGCCTGGCGGG
GTGGGGGCGGTAGGCGCAGTCGCG
(3804 bp)

- SilkBase 1999-2023 -