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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29311_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_virilizer_[Amyelois_transitella]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007530 P sex determination
GO:0007539 P primary sex determination, soma
GO:0007549 P dosage compensation
GO:0008380 P RNA splicing
GO:0016021 C integral component of membrane
GO:0048024 P regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:0.49 TPM:0.49
ORF EntryO_SariMG11204_complete:A_SariMG_comp29311_c0_seq2
Sequence
(Nucleotide)
TGAAAATTCCATCAGGTTATGTTTTGAAGACGTCGGATATAGATTACACGAGTATTAAAC
ATAATAATGCTAAGTACGTGGTTGTTTGTTTACCCATCATATACTGTGAAGCTGGTGGGA
AATGTCCAAAATGCGTAGCGCCCATCTCCCACGCGCCCCGGCCGCGAAGATGCCTGTAGT
GCGAGTGTACGGGGGCCGCGGATGCGAACCTGCCGCGGTCTGTGACCGGCATCCCCCTCC
GCATCCCTCTGTGTGTGTGTGCGCTGTTGAGAGGCGAGGCCGAGTACGTGTGGTGGAGGG
CGGTGAAGTCGTCGACGTGCAGCGACGGTGGACGCGACGTGTTCGGGGGACGCGACCGGA
ACGCGTCCGCGCACCCCTCGCCCCGCACCACGCTCAGCGCCACAGGTGGGCGCTTGTCGT
CGCATGGCCGGGGCTCCGCCCTGATGTCCCGGCAGCCCGCGAGCCGCCGCACCGCGCCCC
CAATAGCCTCCGCCCCTCCGACCAGTCCTCCCCCGGCCCCGGCCCCGGGACCGGACAAAT
AAGAGTTTGCGATCTCCATTATATCACATGACACAAGGTCGCTGTCGTTCACTTCATCCT
CTCCGGTCGCAGCCGGAACGTTCAGCCAATAGCTAGAAGTCAGTCTCTCGTCGTTAGGTT
CCCCTATAGAGTACACAGTCCTGGCTGCGAACTGCGACACCAGCGTGTCGGAGACTGGAA
GGGTTGCTTCAGGACCCTCTGTAAGTGCTGCCGGTGAACAAACATTTGAAAGCTTCTGAA
GATCGTTGGCCAAGAATCTCGCTGCTAGAGCGTCTTCATCTGCATTGCGTTCCTTTAAAA
TCTTTTCCAATGTGAAAATCGGATGATCCTCAGTAGACGGTGAATATCCTACCATATCAG
CGATTTCGTTAATCGTCAGCATTGATTTCCTCCCTACTGGACCACCCTCACCTTCCTCTC
CTCTTAGGATTCTAATGAGATCCAAATAAAGGCTGAGACACTCTATTTTATCTTCACCCA
ATCCCTCTAACGCCCAAATGAAAAACTTGCTCAAAGCTTCCCGTCTTTTTGATACAAATT
TTTTAAATTGTTGGAACCCATACTCATGGTCTGTAAGAACGAAATATGCTCTTAAGATTG
CTTGTGAGACTACGCCAGTTTTCGTCATAGACTCGAGACAATCCGCCGAAGCATCCAGTA
ATGATGCAAGTGCATCTTTGTTTGGTAGTGAATTTGCTAGAAGTACTTCCGGTGGTGCTG
TTAATGGCGTTAGTGTTATTTCCACATCACAGAATGCTGCCAAAGCGTGCGATGCAAACT
CTTGAGCGGCCGAATGCTCATTAGAGTTGTCAGGAAGACTGAGCACCCCGCAGAGAGCCG
CCTGAACATCAGCTGATTTTGGTCCACCACTATTCATTGCGTGAAGAACAGCACATTTTA
CAGGCGCATGTGAAACTAAACACGCCAAAAATCCTAACACTCTAGCGATGCTAGGAGTTG
CGGGTTCTCCTTGCTTCAATATCCTAGTGACCGCACCCACGGTAGCTTTAGCAACCGTTG
CTGCCGTGTTAGGAGCCAAATCTGCAATCTGCACACACACTCGTCGCAGCATAAGAACGA
CTGGTCTGTAAGTCGATATACATATGATTTGGATCATATCGGTCAAGTCATTAGATAGAG
CGTGGAGATGTGCTGACCACAACCGTCTTTCATTGGATGCATCAGCTAATTCTCTATCAG
TGGGAGGTGTTTTCGCTTGCATTGGAAGCGGTAACGGCAGTAATTCAGAGAAGACCAGCA
GCCCCGGGACGAACGTGAAGGGAGCCGTCATTGTATATTGTATAACTTCAGAACAAAGTG
ATGTCCATGGACCGCGTCGTATGGAATCACCATCATTTGCATCATCGGCTATAGGTTGCG
CATACGCCAATAGTGCTTTCACGGCTGCCTCTGCTGCTTTAACCGCCGTTCGATAACCAA
CAGACCCAACTGGATAAGTTTTTACTATCCCATACGTTTTTAATAATATCGGTGCAGCAG
TTAAATCTCTAAATCTCGGACCTCGACACCGAACAACTCTAGCTAACATTTCGTCCAGCA
GCCGCAAACAAGGAAGAATTATTTGAGCCAATTGCAAGCCCTTTACCGATGCAAAGAATG
AAGTATGCATGCTCGGTTGCTCAAAGTGTGTTGCCAGTACATCCAAAATACCCGCTAAAT
GTGCAACACCGTCCAATGAAAACAGTTGCAACACATTATACTTGTACTTAAGTTCGACAT
ACTCTTCGACTGCAGATTCGCTAGCTATCGGTACGTTGGTTTCATAATCACAAATACAAA
AATGACGTAAGATTCTCAGGCAAGTCACTAGTTCTCCAGGTAAGTCGGCAGAATGTTCAG
AACTTGCTTTTAAAATTTCTACACATTCAGCCATATCATCACCAGCTAACACTGTGGGTT
TCTCTATCGGTTTTAAGTATGGGATAACTTCTTGGAGGACACTTGATACGCTTGGCTCAA
ATCTATCGTGTTCTTTTGATACATTTATTAGCCTAGGACCATATTTTTTCAAAAATGGTA
CATTGGCCGAATACCGTATAGCCGCAACTATCAGTTCAATAGCATAACCCTTCGCTGGCG
ACTTTTGTTTCGATGAAACATCATTTTTGTTTTTACTCTTGAAATCATTCTCAAATACTT
CCATGAGACAATCCGCGTTGTCGCCCATAGCAATCACATCAGGGACAGCGATTCTACCAA
TACTGCCAAAGCTCAAGCAGTATAAAGACTGCAGCTTATCGGTGAGCTCGTTTTCATCCC
CCTTCCCGAGTTCTATATCACAGATTGATTGCAAATAATACAAAGCTTTCAGTTTATAAG
CCATCTCGAGTGCAATAATTTGCAGTTCAGAGTAATTGCTTAAGTCATGCGGATAAAGAA
ATTCGTCAGTACTTTGTTGACTGTAAGCTTGTGTTAAAGTCTTGAACAATATTTCACTCA
TTTCAATATTTCTATACAAAAAGTTTAGCCCGTTTTGCGAATTAATTAATTCATATATTA
AATCGTGGATAGGACTTATGACCACGAGGTTGTTACAAGTTGTTGGACAAGTTAACAGAT
AAAGACAAACTTCAAGAATATGGTGAATAGTGAAAAATTCAAGTAATATTTCGTTAGAGC
ACTGTTTGTTGATTTCAAACTGTGCTGAGACTGGCAAGAATCTTTTAGGCTGAGACAAGT
GGAAACACTGAGATCTATACATGTAAAGTGTCTCTTCAAGGGAATTAATAATAAATTCTA
TATCACATTCTGAAAGTTCTATGTCTTCAGTGTCATTGCTCTCTGCTGCTGATTTATTAA
AATTCAATACCAGATCATACAATTTCCCCAATAATTCATAAATATTTAGTTTCTTAATAA
GGGCACTAATTGAGAATTTGATTCTAGCCAAAGGATTAGTTTGCATTATCGATATGAGTG
CTTGATAACCATTCTTTGCTTTGTTATCCTTTTCGTTTTTGTCAAATTTAGGATAAGCAG
CTTCTTTCATAAAATGTTCTATAGATTCCTTTGAAGATAAACAAGAATTAAGCGCTTTTA
ATATCATGAGGCGAATACTTAACGCCATGTATTCTTTTGAATACATCTGTAAGAGTAACA
TTGGCAGATCGATACCCTCTTCCAATAGATCCTTCATAACTCGATTGTTATGTTTGTGAG
ACGTCAAGGCCTCAGCAAGTCTTATTCCAGATTTCATATGCCTTATTTTGTATGTCGGTT
GCTGCTGTGCCAAAGCATTCTCAAAATTAAGACCAATTTTACAGAAAGTTATGATAAACT
TGTAAATTTCACCGAATTCATCTGATAAATTTGAACTGTGAAAAATTCTCAGAATAATAT
CAGTATTGTTGCAAAGATTTGACATGGAAATGTAAAGTTGTTCAGAGAGATGAACCCATT
CTTCTCTTAATGCATTATCAATCTCAGAAAATGAACTTTTAAAAACATTTTGTTCTAATT
TTTTTGACATTTCCGATATTTTTAATAGATCCGAACTAGCATCGCATAGATCATCGAAAG
TTGCATTTAAAACATCCTTAACGCCATCCTTTTTAGTCTTGATAATATGTATTTTATTCT
CGAAATCATATTTAATCCATTCTGCTTTAAATGGGTTATAATATTTAATTATGTCATCAA
CTCCACAGTATTCGTTTACCTCATATTCAACTTCCATATAAGATGGTCCTTCAAGTTCAT
CGCAAATATCTTCATCAGAAAGGATTGGTTCGAATTGTTCAGCTTCGATGGAAGGTTCCT
CATCTGGATTTCTGATTGGCGATTCCCCTTGCTTATAAGTATTATCTATCAATGGGACTG
TAACAAGGCTAGAGTGTGTATCAACATAAGGAGGATTTTCTAGTTCTTGAGATGGGCTTC
TAATAGAGCTTTTGTGCCGATAATTTTGATGGTAGAAATCAACTCTCGGAATTTGTTTTC
CACTTCTATCATACTCGCCACCTTCTTCGGAACGAATGGAATTGATTGGGCTTGGTGCAT
CTCCTTCTCTCGGAGACAAAGGTCTTCGGCTACTGTCTACGGGTGGAGTTCGAGGTCTTT
TCCTAGGATCCTCGCGACTCGGAGATCGACTTCCATAGCTAGATCCTCTAATGCGACTGT
ACGGTGAATGCCTTTTCCTATCATACGGACTCTGTTTCTCATATGATGGAGCTCGTCTTT
CGTATGATGAAGCTCGCTTTTCATAAGGTGAGAGACGTTTTTCATAGCCGACCTTTCTCT
CGTATGATGGTCCTCTCTTGTCATATGGTGATCGTCGCTCGTAAGAACCTGACTCTTTTT
CGTAAGAGCCTCCGCGAGATCGATCATATGAAACATCACGGTGACGTCTATATTCATCCT
TTTTATACGAAACTCTGTCCCAATCGTGGTCGTTTGTCAAAGCTTGCATTCTATCCACAC
TGCGCGATCTAGATCGACTTAAAGGACGATATTCTCCTTTCACAATGTAATCTCGTTCCC
GACTTCGAGATCTCGTACGTAAACGATCTAATCTGTCATCTCTGAGCCGTGATGATTCGC
GACTACGTCTGTCCAAAGATCGCCTTCTGCTTCTGCCCTGTCTTTCTCTTTCATGTTCTA
AGGTGCGGGGGCTATGCCTCAGTCTGTCTCCATCACGCTCACAACTAATATCCCTAGGTT
TATCCCACTCACTCTCGATATGATAAGTCCGTGGATCTTTAGGTCCTTCATTATCGTAAT
AATCACTCCTGTATATTTGGCTATCATAGTTTTCGGGATAATTATTAGGTCCATATGCAT
CCGTGTTTGCAGTTGTCACATTACTGGTATAAGATGGTATAGGATTTGTGGGCTCCTGGG
TCCAATCAGCTTGTTGCTGTTGGATGTTTGGAGGAACAGCTTCTCGAGAAACTGTAGGTC
TTTGTATGTTTGGTGGTGGGTTTACACCTACTGGTGTTTCTGGTATTACTTGAGTTAGAT
TGCCATAGACAGCTAATGTGATAGTTGTGTACCAGCCACGAAGTACAAGACCATCGGTAG
GTATCCTGGATTGGTCCAATCCTGAGCTACATTCCATGTGTATCCGTCCATTCTGGCAGT
AGTCCAGACTACCTAAAGCCTCAAAGGTCGATGCACCCGGCTTACTTAGATCATTTACAA
AAAAATCAATATGAAATTTAGTCGGATTTGTCGCTCCTAGTCGAACTCCGCCGGGAAAAT
CGCCCTCAACACGGGCACCCAGCGGTATTATTCGTATTTCTCTCACATATACAGATTTTG
GAAACTGCACTAAATCCAAATTCAGCTCCTCACTTGTGTCGTGAGAGAATGTATCAAAAA
ACAAAAGATCTGGTTGCTCTATGTTCGCCATTTTAACACATGTGTGTTACTGCCACAGAT
TACTACAATCACAAAACAGATTTTTTGTAAAATTCACAAAGTAAAAAGAAACATCGTAAA
AATATTTT
(6008 bp)

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