SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29311_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_virilizer_[Amyelois_transitella]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007530 P sex determination
GO:0007539 P primary sex determination, soma
GO:0007549 P dosage compensation
GO:0008380 P RNA splicing
GO:0016021 C integral component of membrane
GO:0048024 P regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:6.35 TPM:6.37
ORF EntryO_SariMG11198_complete:A_SariMG_comp29311_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTAGTTTTGATAAAAATTTATTGTAAGAGTAAATAATACAGCGGATTAAGCTTT
TATCTGATAAAGGAGCGGTGGCGCTGACCGCGCTGCATCCGCCCCCCGCCCCACCCCATG
CCGCCCATCATATACTGTGAAGCTGGTGGGAAATGTCCAAAATGCGTAGCGCCCATCTCC
CACGCGCCCCGGCCGCGAAGATGCCTGTAGTGCGAGTGTACGGGGGCCGCGGATGCGAAC
CTGCCGCGGTCTGTGACCGGCATCCCCCTCCGCATCCCTCTGTGTGTGTGTGCGCTGTTG
AGAGGCGAGGCCGAGTACGTGTGGTGGAGGGCGGTGAAGTCGTCGACGTGCAGCGACGGT
GGACGCGACGTGTTCGGGGGACGCGACCGGAACGCGTCCGCGCACCCCTCGCCCCGCACC
ACGCTCAGCGCCACAGGTGGGCGCTTGTCGTCGCATGGCCGGGGCTCCGCCCTGATGTCC
CGGCAGCCCGCGAGCCGCCGCACCGCGCCCCCAATAGCCTCCGCCCCTCCGACCAGTCCT
CCCCCGGCCCCGGCCCCGGGACCGGACAAATAAGAGTTTGCGATCTCCATTATATCACAT
GACACAAGGTCGCTGTCGTTCACTTCATCCTCTCCGGTCGCAGCCGGAACGTTCAGCCAA
TAGCTAGAAGTCAGTCTCTCGTCGTTAGGTTCCCCTATAGAGTACACAGTCCTGGCTGCG
AACTGCGACACCAGCGTGTCGGAGACTGGAAGGGTTGCTTCAGGACCCTCTGTAAGTGCT
GCCGGTGAACAAACATTTGAAAGCTTCTGAAGATCGTTGGCCAAGAATCTCGCTGCTAGA
GCGTCTTCATCTGCATTGCGTTCCTTTAAAATCTTTTCCAATGTGAAAATCGGATGATCC
TCAGTAGACGGTGAATATCCTACCATATCAGCGATTTCGTTAATCGTCAGCATTGATTTC
CTCCCTACTGGACCACCCTCACCTTCCTCTCCTCTTAGGATTCTAATGAGATCCAAATAA
AGGCTGAGACACTCTATTTTATCTTCACCCAATCCCTCTAACGCCCAAATGAAAAACTTG
CTCAAAGCTTCCCGTCTTTTTGATACAAATTTTTTAAATTGTTGGAACCCATACTCATGG
TCTGTAAGAACGAAATATGCTCTTAAGATTGCTTGTGAGACTACGCCAGTTTTCGTCATA
GACTCGAGACAATCCGCCGAAGCATCCAGTAATGATGCAAGTGCATCTTTGTTTGGTAGT
GAATTTGCTAGAAGTACTTCCGGTGGTGCTGTTAATGGCGTTAGTGTTATTTCCACATCA
CAGAATGCTGCCAAAGCGTGCGATGCAAACTCTTGAGCGGCCGAATGCTCATTAGAGTTG
TCAGGAAGACTGAGCACCCCGCAGAGAGCCGCCTGAACATCAGCTGATTTTGGTCCACCA
CTATTCATTGCGTGAAGAACAGCACATTTTACAGGCGCATGTGAAACTAAACACGCCAAA
AATCCTAACACTCTAGCGATGCTAGGAGTTGCGGGTTCTCCTTGCTTCAATATCCTAGTG
ACCGCACCCACGGTAGCTTTAGCAACCGTTGCTGCCGTGTTAGGAGCCAAATCTGCAATC
TGCACACACACTCGTCGCAGCATAAGAACGACTGGTCTGTAAGTCGATATACATATGATT
TGGATCATATCGGTCAAGTCATTAGATAGAGCGTGGAGATGTGCTGACCACAACCGTCTT
TCATTGGATGCATCAGCTAATTCTCTATCAGTGGGAGGTGTTTTCGCTTGCATTGGAAGC
GGTAACGGCAGTAATTCAGAGAAGACCAGCAGCCCCGGGACGAACGTGAAGGGAGCCGTC
ATTGTATATTGTATAACTTCAGAACAAAGTGATGTCCATGGACCGCGTCGTATGGAATCA
CCATCATTTGCATCATCGGCTATAGGTTGCGCATACGCCAATAGTGCTTTCACGGCTGCC
TCTGCTGCTTTAACCGCCGTTCGATAACCAACAGACCCAACTGGATAAGTTTTTACTATC
CCATACGTTTTTAATAATATCGGTGCAGCAGTTAAATCTCTAAATCTCGGACCTCGACAC
CGAACAACTCTAGCTAACATTTCGTCCAGCAGCCGCAAACAAGGAAGAATTATTTGAGCC
AATTGCAAGCCCTTTACCGATGCAAAGAATGAAGTATGCATGCTCGGTTGCTCAAAGTGT
GTTGCCAGTACATCCAAAATACCCGCTAAATGTGCAACACCGTCCAATGAAAACAGTTGC
AACACATTATACTTGTACTTAAGTTCGACATACTCTTCGACTGCAGATTCGCTAGCTATC
GGTACGTTGGTTTCATAATCACAAATACAAAAATGACGTAAGATTCTCAGGCAAGTCACT
AGTTCTCCAGGTAAGTCGGCAGAATGTTCAGAACTTGCTTTTAAAATTTCTACACATTCA
GCCATATCATCACCAGCTAACACTGTGGGTTTCTCTATCGGTTTTAAGTATGGGATAACT
TCTTGGAGGACACTTGATACGCTTGGCTCAAATCTATCGTGTTCTTTTGATACATTTATT
AGCCTAGGACCATATTTTTTCAAAAATGGTACATTGGCCGAATACCGTATAGCCGCAACT
ATCAGTTCAATAGCATAACCCTTCGCTGGCGACTTTTGTTTCGATGAAACATCATTTTTG
TTTTTACTCTTGAAATCATTCTCAAATACTTCCATGAGACAATCCGCGTTGTCGCCCATA
GCAATCACATCAGGGACAGCGATTCTACCAATACTGCCAAAGCTCAAGCAGTATAAAGAC
TGCAGCTTATCGGTGAGCTCGTTTTCATCCCCCTTCCCGAGTTCTATATCACAGATTGAT
TGCAAATAATACAAAGCTTTCAGTTTATAAGCCATCTCGAGTGCAATAATTTGCAGTTCA
GAGTAATTGCTTAAGTCATGCGGATAAAGAAATTCGTCAGTACTTTGTTGACTGTAAGCT
TGTGTTAAAGTCTTGAACAATATTTCACTCATTTCAATATTTCTATACAAAAAGTTTAGC
CCGTTTTGCGAATTAATTAATTCATATATTAAATCGTGGATAGGACTTATGACCACGAGG
TTGTTACAAGTTGTTGGACAAGTTAACAGATAAAGACAAACTTCAAGAATATGGTGAATA
GTGAAAAATTCAAGTAATATTTCGTTAGAGCACTGTTTGTTGATTTCAAACTGTGCTGAG
ACTGGCAAGAATCTTTTAGGCTGAGACAAGTGGAAACACTGAGATCTATACATGTAAAGT
GTCTCTTCAAGGGAATTAATAATAAATTCTATATCACATTCTGAAAGTTCTATGTCTTCA
GTGTCATTGCTCTCTGCTGCTGATTTATTAAAATTCAATACCAGATCATACAATTTCCCC
AATAATTCATAAATATTTAGTTTCTTAATAAGGGCACTAATTGAGAATTTGATTCTAGCC
AAAGGATTAGTTTGCATTATCGATATGAGTGCTTGATAACCATTCTTTGCTTTGTTATCC
TTTTCGTTTTTGTCAAATTTAGGATAAGCAGCTTCTTTCATAAAATGTTCTATAGATTCC
TTTGAAGATAAACAAGAATTAAGCGCTTTTAATATCATGAGGCGAATACTTAACGCCATG
TATTCTTTTGAATACATCTGTAAGAGTAACATTGGCAGATCGATACCCTCTTCCAATAGA
TCCTTCATAACTCGATTGTTATGTTTGTGAGACGTCAAGGCCTCAGCAAGTCTTATTCCA
GATTTCATATGCCTTATTTTGTATGTCGGTTGCTGCTGTGCCAAAGCATTCTCAAAATTA
AGACCAATTTTACAGAAAGTTATGATAAACTTGTAAATTTCACCGAATTCATCTGATAAA
TTTGAACTGTGAAAAATTCTCAGAATAATATCAGTATTGTTGCAAAGATTTGACATGGAA
ATGTAAAGTTGTTCAGAGAGATGAACCCATTCTTCTCTTAATGCATTATCAATCTCAGAA
AATGAACTTTTAAAAACATTTTGTTCTAATTTTTTTGACATTTCCGATATTTTTAATAGA
TCCGAACTAGCATCGCATAGATCATCGAAAGTTGCATTTAAAACATCCTTAACGCCATCC
TTTTTAGTCTTGATAATATGTATTTTATTCTCGAAATCATATTTAATCCATTCTGCTTTA
AATGGGTTATAATATTTAATTATGTCATCAACTCCACAGTATTCGTTTACCTCATATTCA
ACTTCCATATAAGATGGTCCTTCAAGTTCATCGCAAATATCTTCATCAGAAAGGATTGGT
TCGAATTGTTCAGCTTCGATGGAAGGTTCCTCATCTGGATTTCTGATTGGCGATTCCCCT
TGCTTATAAGTATTATCTATCAATGGGACTGTAACAAGGCTAGAGTGTGTATCAACATAA
GGAGGATTTTCTAGTTCTTGAGATGGGCTTCTAATAGAGCTTTTGTGCCGATAATTTTGA
TGGTAGAAATCAACTCTCGGAATTTGTTTTCCACTTCTATCATACTCGCCACCTTCTTCG
GAACGAATGGAATTGATTGGGCTTGGTGCATCTCCTTCTCTCGGAGACAAAGGTCTTCGG
CTACTGTCTACGGGTGGAGTTCGAGGTCTTTTCCTAGGATCCTCGCGACTCGGAGATCGA
CTTCCATAGCTAGATCCTCTAATGCGACTGTACGGTGAATGCCTTTTCCTATCATACGGA
CTCTGTTTCTCATATGATGGAGCTCGTCTTTCGTATGATGAAGCTCGCTTTTCATAAGGT
GAGAGACGTTTTTCATAGCCGACCTTTCTCTCGTATGATGGTCCTCTCTTGTCATATGGT
GATCGTCGCTCGTAAGAACCTGACTCTTTTTCGTAAGAGCCTCCGCGAGATCGATCATAT
GAAACATCACGGTGACGTCTATATTCATCCTTTTTATACGAAACTCTGTCCCAATCGTGG
TCGTTTGTCAAAGCTTGCATTCTATCCACACTGCGCGATCTAGATCGACTTAAAGGACGA
TATTCTCCTTTCACAATGTAATCTCGTTCCCGACTTCGAGATCTCGTACGTAAACGATCT
AATCTGTCATCTCTGAGCCGTGATGATTCGCGACTACGTCTGTCCAAAGATCGCCTTCTG
CTTCTGCCCTGTCTTTCTCTTTCATGTTCTAAGGTGCGGGGGCTATGCCTCAGTCTGTCT
CCATCACGCTCACAACTAATATCCCTAGGTTTATCCCACTCACTCTCGATATGATAAGTC
CGTGGATCTTTAGGTCCTTCATTATCGTAATAATCACTCCTGTATATTTGGCTATCATAG
TTTTCGGGATAATTATTAGGTCCATATGCATCCGTGTTTGCAGTTGTCACATTACTGGTA
TAAGATGGTATAGGATTTGTGGGCTCCTGGGTCCAATCAGCTTGTTGCTGTTGGATGTTT
GGAGGAACAGCTTCTCGAGAAACTGTAGGTCTTTGTATGTTTGGTGGTGGGTTTACACCT
ACTGGTGTTTCTGGTATTACTTGAGTTAGATTGCCATAGACAGCTAATGTGATAGTTGTG
TACCAGCCACGAAGTACAAGACCATCGGTAGGTATCCTGGATTGGTCCAATCCTGAGCTA
CATTCCATGTGTATCCGTCCATTCTGGCAGTAGTCCAGACTACCTAAAGCCTCAAAGGTC
GATGCACCCGGCTTACTTAGATCATTTACAAAAAAATCAATATGAAATTTAGTCGGATTT
GTCGCTCCTAGTCGAACTCCGCCGGGAAAATCGCCCTCAACACGGGCACCCAGCGGTATT
ATTCGTATTTCTCTCACATATACAGATTTTGGAAACTGCACTAAATCCAAATTCAGCTCC
TCACTTGTGTCGTGAGAGAATGTATCAAAAAACAAAAGATCTGGTTGCTCTATGTTCGCC
ATTTTAACACATGTGTGTTACTGCCACAGATTACTACAATCACAAAACAGATTTTTTGTA
AAATTCACAAAGTAAAAAGAAACATCGTAAAAATATTTT
(6039 bp)

- SilkBase 1999-2023 -