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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29298_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_19550_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
Transcript
Level		FPKM:1.35 TPM:1.36
ORF EntryO_SariMG11167_5prime_partial:A_SariMG_comp29298_c0_seq5
Sequence
(Nucleotide)
TTTAGAATGAACGACACAAGTATTGATAGGAAATCAACAGAATAAACTAAATAAAGACGT
CAAAGTACTACGTATTATAAAATTGTTATTTTTCCAAATTGTAACATAAAAAAAAATCAC
CAAACACCGACTATAAAATGTCTCATTTTTATAAACATTCCGTTTCTATAGAAACTTCAA
CGTTTCTGTTATAAAAATAAACAGATATATTATCATCATCTAGAACCGTCTATACAAACT
TCGGTTCTGAATAAAGCACAAACTCTACTGTAAAGTCAAAATTTGCACTGAATTATAATC
TAAAAATATGTTGATCACGACCAAATACGGTTTCCTAATTAGGAGTGGGGTGATATATAT
ATAATAGACATATCGCTAAATCAATAGATCGTTTTCTATTGAAACTATATTCCAAGCGCT
AATCATTGCATATATTGCGGCCTAAACCACCCTATACAATCTGACATCCCTGTCGCACCC
GTACCGAATAAAACCAGAGTGAGCGAGACACACGACCGGGAGCTGCACGTAAACATTTAT
TCGTAAACTAACTAACGTTATGATTTTTTTTTAAGTCACACAAAACATAAAACAATAAAC
AGCGAACGATAACTTTGGTAATATTAATATAACGTAAAATACGTACAATGTTTATGACTG
AATGTCGGTGTCAATATATAGTTTCAAAAAACCGATACAAAAAACCTATATATTGTACAT
ATAGTTTTGATTCAATATGCTTGGAAAAACTATCATAGTGGTAGGTTTTAGACGTTCATG
AGCGCCTTCTCAGGGACTAAATTGAATTTAAAAAAATGTTTTTTTTTTTAACATCAAACG
CTGTCACATACATATCCATGATTTTGATATTATTAATTTAAAATGTAGTGAACTTTCAAA
CGAAATTCCGATTTAAAAATCAAATTACACAGATAAATTACTAGAGTAGAGGTGTTAGTA
AAATTTTTTTTTTTAATTTCAAAATGTAACGGTGCGTTTGATTTTAGACGAAACATTCAT
ATCGATAACGTATTAAGTTCATATGTCTATATATATGTAGTTTTTCAGGAGGGCGAAATT
TGTACGACCGTTTGCGCGGGAACATCTATTCGTTGCGACAATTAGCGACCGAAAATCTTT
ACGATTTATTGAAATTCTTTTTTTTTTCAGAAATATACTATTTAATTATATTACGGGACG
ACACTCTCAATGACGTTAAAAACTGACGACTTATATACGAGTCGTATAGAACCATAGGCG
GCTATGTACAATCGCCAACAAAAGAAACATTAATATCAGTTTATTTTTTTAAACCTTGTG
CTACTAAGTTCATGTTGTCATATAAATAAACTACCCCTATAGATATTTTAATCTTTTATA
CATCAATCGTCACTGCTATACTTTTTATCCACTTATCCAAAAGCGAGTTGAAGTGTAATT
AGCCACTTTTGATTCTATACGACTCGTATTATGCTTAGAAGGTAATTTGATACAAACTGT
ATTAGCCCACTCCTAGCCGTAATAATAATGAATGAATAAAATCCGTCGTTCGTACAACGC
CGGGTAGACGGCTCTGTGGGGACCCGTCGCCGGCCGTCGGGCCGCGAGGCCGGCCGGAGG
TTAATGTCTCGCGTCACGCCTGTGCTCTCGGTCGCGGTCTCGGTCGCCGGGCGGCGGGTC
TCGGTCTCGCCGGTCTCGGTACCGCTCGTCGTAGTACGGCGCGGCTGCGGCGCGACTCTT
TGTGCCGGCCGCGTCGCCGGCGCCGGTCTCCGGTGCCGCTTCGACGGGCGATTTACGAGG
CCTCTCTTCTCGGCTATGACCTCTGTTATAATGATCAGCTCGTTCACGTTCCCTAGAACG
TGATCTGTCCCTTTCCCTCTCACGGTAATCCCTGTAATACGCATCACGGTCGCGTTCACG
ATCGCGTTCTCTCGATTTCTCTCTATACCTGTCTCGCTCTTCCCTGTCGCGACTGCGGTC
ACGGTACCGGCTGGCGGAGCGGTCGCGGCGCCGCGGCGCGCGGTGGTGCGCGCGCGCGTC
CCTGTCGCGCGACCTCGATCGGCGCGACCGTTCCCCGCTACTGTACGACTTGGTCTCGAC
GCCGTGCAGCGTGTCTTGCAGCGACGATATCAATATCTTGCAACGGTCGTCGTGCGCTAC
CTTGCTCTGTTTGATGAGCGATATGGCTGTGACGAGGGTCTCGATGGCGGAGGCGTACTC
GCCGGCGGCGGCGTCGCTGACGGCGCGCGCAATGGCGCTGGAGGAGACGGTGCGGTTGCG
GCTCATCACCTCCTCGAACTCGGCCTCGCTGATAGCGGGGTGGGCCGCGAGCGCTGCGTG
CGGCGCGTGGGCCCCGTGCGCCAGGTGCGGCCCGTGCGCGCCGCCCAGCGGGGGCCCGTG
GTGCCCCGCGCGTCCCGCCTCCACGCCACCCGGGTAACTCTGTGGTTGCCTTCCATAAGG
TGGTCTAGCTCCTGGCAAAGGTCCCTGAGACGGAGGCGGAGCACCATGTCCCGGATGCCC
ATATGGTCCACCTGGTCCAGGTGGTCCAGGCTGAGGCGGTGGCTGCAGAGAAGGCGCCTG
TGGTCCAGGCGGCTGTTGGCTGAAGAAAGCCGGGTTCACGTGAGGAGCCGGAGCTCCACC
ACCAACTCCTGGATGTTGAGGCATTGGTGCTGGACCTCTGATTGGACCTTGCTGATGCGG
CGCAAGCTGATGATGCGGTGGAATACCTTGACCCGCAGGGGCATGTGGAGGCGGCATCTG
GTGCTGCATCTGATGATGCGGGGGTCCGTACTGAGGGGCGGGCTGTGGTGGCAATGCATG
CGGGGGTCGCGCCCCCCACTCAGCAACAGGACGGGGACCGGGACCCCCCGGACCGCCGGG
CACACCAGCACGCTGCATCGCAGGCGGACCTTGGAACTGCATTGGTGGGCGATGTGGAGG
CGGTCCTTGGTGTGGTGGTGGCTGATGTGCCATGTGATGCGGTGGCGGTTGATGCTGCGG
CAAGTGATGCTGCGGATGATGTGGCGGCGGACCGCGGAGCTGATGTTGTCCGGGACCAAC
CATCATCATGCGCGGTCCGTTTGGCCCAGGCCCGTTCGGACCACCACCGAAGAACTCTCC
AGGATGGGGACCGGGAAGGCCGCCTGGATGTGGTCCTCTCATGCCAGGGTTATTTGGTCC
CGGTGGGGTAGACCTAGTCTTCGATTGACTTTCAAATTGGTTTAAAGCCTGTTTGGTGGG
TAACGTGACAACAGGGTGTTGCCCATGTATCTCTTTCTTAGGGAGTCGATCCAAAATCAT
TCTTATCGACTGATCAGACCCGAGAGATACAACGCAGAAACCCTTTGATTGTCCGTTAGC
CCTATTCTCGAAGAACTTCACATCTTGAAAGTCTGTCACTCCGACGTCGGCGATCGCATT
CGCGATATCTTGATCTGTTGCCCACCAAGTAAGGTTGCCGACGTAAAGCTGGAAGCGGCG
GCCATGATGTCCGTGGTTTGGTCCGTGAAATGAAACATTGCCGTTGGTCTCCTCCGGCGG
ATGAGAATGCTGTGGCACCACTGTGTTCGGTGGTCCATCTCCATCCTCGGGCTTCGTTGA
TGGTGCAGAGATCACGTCGTCATACAAATCAACATTTTCACCGCCAAACTCTTCCTGGCG
ATTAAAATCTGATTCAATATCGTCAGCGTACAAATCTATATCCACGCCTCCGTCCGCCAT
TTTCCGAAATGTGAAATAGCAACAAAAGTGGAGTCGCG
(3758 bp)

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