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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29236_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cactin_[Amyelois_transitella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0001933 P negative regulation of protein phosphorylation
GO:0002376 P immune system process
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
GO:0031665 P negative regulation of lipopolysaccharide-mediated signaling pathway
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032688 P negative regulation of interferon-beta production
GO:0032717 P negative regulation of interleukin-8 production
GO:0032720 P negative regulation of tumor necrosis factor production
GO:0034122 P negative regulation of toll-like receptor signaling pathway
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0060339 P negative regulation of type I interferon-mediated signaling pathway
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071356 P cellular response to tumor necrosis factor
Transcript
Level		FPKM:1.11 TPM:1.11
ORF EntryO_SariMG10986_complete:A_SariMG_comp29236_c0_seq2
Sequence
(Nucleotide)
TAATGTTACACGAAACAATATAAGTTGTTTATATGATAATGTAATCTATTGTTTGTAGAT
TTATCGACGATATCTGTATCTCTTGAAGTGGAACCAGAGCTGGAAAATGTTGTTGTGAAA
GTGACACCTGAAGCCGCGCTTGTACGAGTACTCCCACTCCCGGTTCACTATCTTGAACGC
GATGTCCTCGTAGGGCGGACCCGCGCGGAACCGCAGCACCGCGAACTCTGCGTTCTCGGG
GCACGGTTTCAGTGTAAACTCAGGCGTAGCGTTCTTATCAATCAAGTCTGGATAGAATAT
ATTGAACTTGTATCCCTGCACGATCTTCGGCGGCGGGTTGTCCATGTCGTAGTGCGTCTG
GTTGTACTTGTTCCACTCGAAGCCCGTGTGGACTCTGTTGAAGTATCTGGGCTTCCTGGG
TCGGTACTTGTCAGCCCACAGGCAGGGCTGGTCCGGCAGCGGGTGCTCGACGCTGAACTG
TGCCTCCTCCTGCGAGGGCCCCATGGCGCGCTCGAGCGCCGCCTCGGGGGCGGAGGGCGA
GGGCTCCGGCGCGCGGGTGCTGGCCGCCGCGGGGGGCAGGCGCAGCGCGTGCTCGCGCGT
CGCGTTGGCGGCGTGGAGGCGCGCCCGCAGGTAGCGGAGCCGCTGCACGTCCTCGTCGGG
CTCCGTGAGCAGCGTGGCGGGCTCGAGGGCGGAGGGGCTCAGCGGGACAGGCGAGTAGCG
CCCCGCCTGGTAGAGCGCGAGACACGCCGACTCCGCCCCCTCCTCCTCCTGCTCCTGCTC
CTCCTGCTCCGGCGCCTCCTCGTCACGGCCCTCGTTCTGAGCTTCGTTTACATATTCATT
TAACATTTGCGACGTCCCAGGATCAGTTTCCGCGGGTCCCGACCCGTGTTCGTTGGACGG
ATGCACATGCACTCCCTGCTCGCGCTTCAGCAGCTGCAGCTTGCGGCGCAGGTTGTGCTG
GTGCCGGTCCCGCAGCCGAGCGCGGCCCATGTGCGCTGCAACACAGCACAGTACAGTACA
GTACAGCACAGCACAGCACAACTCAACTCATCACCCTGCACCATATTAACGTTAC
(1075 bp)

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